Leminorella richardii: NCTC12151_00730
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Entry
NCTC12151_00730 CDS
T05503
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lri
Leminorella richardii
Pathway
lri03030
DNA replication
lri03430
Mismatch repair
lri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12151_00730 (dnaE)
03430 Mismatch repair
NCTC12151_00730 (dnaE)
03440 Homologous recombination
NCTC12151_00730 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lri03032
]
NCTC12151_00730 (dnaE)
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_00730 (dnaE)
Enzymes [BR:
lri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12151_00730 (dnaE)
DNA replication proteins [BR:
lri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12151_00730 (dnaE)
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12151_00730 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SQI36379
UniProt:
A0A2X4UCN0
LinkDB
All DBs
Position
1:751022..754504
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRIHSDYSMIDGLAKVGPLVKKVGSLGMPAMAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFRMQGGLAGDELAELTVLASNNTGYQNLTLLISRAYQRGYVQGGPVIDRDW
LVEHKEGLILLSGARFGDVGQSLIRGNQQQVDECVAFYREHFPERYYLELVRTGREEEEP
YLHAAVELAAKEGLPVVATNDVKFIARSDFDAHEIRVAIHDGFTLDDPKRPKKYSDQQYL
RSEEEMCELFSDIPEALMNSVEIAKRCNVTIRLGEYFLPQFPTGEMTTEDFLVKCAKEGL
EKRLAFLYPDEDVRAKRRGEYDERLEVELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYSLGITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIEHVSE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPELYESDEEVKALIDMARQLEGVTRNAGKHAGGVVISPTKITDFAPLYCDPEGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKSGQEPLDIAAIPLDDQKSFDVL
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGSINNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECLRMGLKVLPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFKELFDLCARSDMKRLNKRVLEKLIMAGAFDRLGPHRAALMH
SLTEAMKAADQHAKAEALGQADMFGVLAEEPEHVEKAYANVAPWPEQVILDGERETLGLY
LTGHPITQYLRELERYTGGVRLKDMHPTERGKMTMAAGLSIGARVMTTKRGNRIGICTLD
DRSGRLEVMLFSEALEKYQHLLEKDRVLIATGQVSFDDFSGGLKMMVRELMDISEAREKY
ARGLAISLTDGQIDDQLLNRLRESLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPSE
SLLIDLRKLLGNAQVELEFE
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgttcatcttcgaatccacagcgactattccatgattgatggg
ctcgccaaggtgggcccgttggtgaaaaaggtcggctctttaggcatgccggcgatggcg
attaccgactttaccaacctgtgtgggctggtgaagttctacggctcggcacacggggcg
ggaatcaagcctattatcggcgccgattttcgcatgcagggtgggctggcgggggacgag
ctggcagagctgacggtgctggcctccaataataccggctaccagaatctaacattattg
atttcacgcgcctatcagcgcggctacgtacagggcggcccggttatcgaccgcgactgg
ctggttgagcataaagaagggttaatactgctttccggcgcgcggtttggcgacgtcggt
cagtccctaatacgcggcaaccagcagcaggttgatgaatgcgtcgccttttatcgtgaa
cattttcccgaacgctactaccttgagctggtaagaaccgggcgagaggaggaagaaccc
taccttcacgccgccgttgagctggcagccaaagaggggctaccggttgttgccacaaac
gacgttaagtttattgcccgctctgactttgatgcacatgaaatccgcgtggcgatccac
gacggatttacgctagacgatccaaagcgcccgaaaaagtacagcgatcaacagtacctg
cgcagcgaagaggaaatgtgcgagctgttttccgacattcctgaagcgctgatgaacagc
gttgaaatcgccaagcgctgcaacgtgactatccgcctgggcgagtacttcctgccgcag
ttccctaccggtgaaatgaccaccgaagactttctggttaagtgcgccaaagaggggctg
gaaaagcggctggcgtttttatatcccgatgaggacgtgcgagccaagcggcgcggtgag
tacgacgaacgcctggaggttgagcttaacgttatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtccaaggacaacgacgtgccggtcggcccg
gggcgaggctccggcgcgggctcgctggtggcctattccctcggcattaccgatttggac
ccgctggagttcgacctgctgttcgaacgtttcctgaaccctgagcgggtctccatgcct
gacttcgacgtcgacttctgtatggaaaagcgcgaccgggtgattgaacacgtttctgaa
atgtacggtcgggacgcggtctcgcaaattattaccttcggcaccatggcggcgaaggcg
gttatccgcgacgtgggccgcgtgctgggccacccgtacggcttcgtcgaccgcatttcc
aagctggtgccgcccgatccgggtatgacgctggaaaaagcgtttgctgccgagccgcag
ctgcctgagctgtacgagtctgacgaagaggtgaaggcgctgatcgacatggcgcgccag
cttgaaggggtcactcgtaacgccggtaagcacgccgggggcgtggtgatttcccccacc
aagataaccgacttcgcgccgctgtactgcgatcctgaagggcagttcccggtcactcag
ttcgataaaaacgacgtagagtacgccgggctggtgaagtttgacttccttggcctgcgc
accctgactattatcgactgggcgctggagatgatcaacgctcgccgcgctaagagcggc
caagagccactggacatcgcggccatcccgcttgacgaccagaagagctttgacgtttta
cagcgttcggaaaccaccgcggtattccagcttgaatcccgcggcatgaaagacctgatt
aagcgcctgaagcctgactgcttcgaagacatgatcgctctggtggcgctattccgtccg
gggccgctccagtcaggcatggtggacaactttatcgaccgtaagcacgggcgtgaggag
atttcctacccggatatccagtggcagcacgagtcgctgaagcccgttttggagcccacc
tacggcatcatcctgtatcaagaacaggttatgcagattgctcaggtgctggctggctac
actctgggcggtgcggacatgctgcgccgcgcaatgggtaagaaaaagccggaggagatg
gccaaacagcgctcggtgtttgaagagggctcaattaataacggcgtcgacggcgagctg
tcgatgaagatctttgacctggtggaaaagttcgccgggtacggttttaacaagtcacac
tccgccgcctatgcgctggtgtcttatcaaactctatggctgaaaacccactatcccgcc
gagtttatggcggcggtaatgactgccgatatggacaacaccgagaaggtagtagggctg
gtggatgaatgcctgcgcatggggctgaaagtgcttccgccggatattaacagcggcctg
taccatttccacgttaacgacgacggtgagattgtttacggcattggcgctattaaaggc
gttggtgaaggacccattgaggccattattgaggcacgcaatcagggcggctatttcaaa
gagctgtttgacctgtgcgcccgctccgacatgaagcgcctcaacaagcgggtgcttgaa
aagctgattatggcaggagccttcgaccgccttggcccacaccgcgccgcgcttatgcat
tcactgaccgaagcgatgaaggcggcggatcagcacgccaaagcggaagcgctggggcag
gcagacatgttcggcgtgctggcggaagagcctgagcacgttgaaaaggcctacgccaac
gtagcgccgtggcctgaacaggtgattctggacggcgagcgtgaaacgctggggctatac
ttaactggccacccgattacccagtacctgagggagctcgagcgctacaccggcggtgtg
cgcctgaaagacatgcacccaacggaacggggcaagatgaccatggctgccgggttgtcc
attggcgccagagtgatgaccaccaagcggggtaacagaattggcatctgtacgctcgat
gatcgttccggtcgccttgaagtcatgttattctctgaggcacttgaaaaataccagcac
ctgctggagaaagaccgcgtcctgattgcaaccggacaggtcagctttgatgattttagc
ggcgggcttaaaatgatggtccgcgaattgatggacatcagtgaagcgcgggaaaagtat
gcccgcggccttgccatttcgttaacggacgggcaaattgatgaccagctgttaaaccgt
cttcgcgaatcgttggaaccgcatcgatcggggacgattccagtccatctgtattatcag
agagaagacgcaagggcgagactgcgctttggcgccgcgtggcgcgtgacgccgagcgaa
agcctgcttatcgacctgcggaagctgcttggtaacgcccaggttgaattggaatttgaa
taa
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