Leminorella richardii: NCTC12151_01880
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Entry
NCTC12151_01880 CDS
T05503
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lri
Leminorella richardii
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lri03016
]
NCTC12151_01880 (rnb)
Enzymes [BR:
lri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NCTC12151_01880 (rnb)
Transfer RNA biogenesis [BR:
lri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC12151_01880 (rnb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
SQI41007
UniProt:
A0A2X4UMB1
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All DBs
Position
1:1992756..1994699
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AA seq
647 aa
AA seq
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MFQNNPLLAQLKQQLHATAPRVEGTVKATEKGFGFLEVDNQKSYFIPPPQMKKVTHGDRI
VATLHTQNGKEQAEPESLIEPFLSRFVARVQKKGERLFVQSDHPMLKEAFPAKVKSSIET
PLNEGDWVVAEMNGHPLNGERGFSALITEFITFADDHYAPWWVTLSRHQLERDAPQWTPE
EIQDNGIVRRDISQLHFVTIDGESTQDMDDALFVERLDGDSLKLFIAIADPTAYLSVGSE
LDKIAQTRAFTHYLPGFNIPMLPRDLSDNLCSLHPNERRPALVCQVSILADGSLGEDIEF
FSAWVTSKDKLDYDRVSDWLEEKSGWQPQSEASAEQIKLLHQVALRRIAWRTQHALVFKD
RPDYRFILGENGAVLDIITEHRRMANRIVEESMITANICAAQVLKQKLGYGIFNTHAGFD
PAQVEQAVEVLKNNNVVFDKDELLTLDGFCRLRRILDERPTSYLDSRIRKYQTYAEVSTE
PAPHFGLGLDAYATWTSPIRKYGDIINHRLLKALIHGQPSSAPDSSVMQPLVDRRRANRL
SERDVSDWLYARFLQDKAGSGVCYQAEIIDISRGGMRVKLLENGAVAFIPAPFIHSVRDE
LICSPENGTIQLKGEPLYQQGDTISVTIEEVRIETRSVIARPAPSLA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaataacccgctgcttgcccagcttaaacagcaactccacgctactgcgcct
cgtgtagaaggcaccgttaaggctacggagaaaggctttggctttctagaggtcgacaac
cagaaaagctactttattccccctccgcagatgaaaaaagtcacccacggggaccgtatt
gttgccacgctgcacacgcaaaatggtaaagagcaagctgagccggaatcgctgatcgaa
ccctttctgagccgttttgtcgcccgggttcagaaaaaaggcgagcgtctttttgtacag
tccgatcatccgatgctaaaagaagcgtttcccgccaaagtgaagagcagcattgaaacg
ccgcttaacgaaggtgactgggtggtggcggaaatgaatggtcatccccttaacggcgaa
cgcgggtttagcgcactaattacagaatttattacctttgcagacgatcactatgcgcca
tggtgggtgacactatcacgacaccagcttgagcgagatgcacctcaatggacacctgaa
gagattcaggacaacggcatcgttcggcgcgatatcagccagctgcactttgttactatc
gacggtgagtctactcaggatatggacgacgcccttttcgtcgagcgtttagacggtgat
tcactcaagctgtttatcgccattgccgatccgactgcctaccttagcgttggcagcgaa
ttagacaaaattgcccaaacgcgcgcgtttacccactacctgcccgggtttaacatcccc
atgctgccaagggatctgtcagacaatctctgttctcttcaccccaatgagcgccgccca
gcgttagtctgtcaggtatccattttagccgacggcagcctgggtgaagacattgagttc
tttagcgcctgggtaacttcgaaggacaagctggattacgatcgcgtttccgactggcta
gaagaaaaaagtggttggcagcctcagagcgaagcttctgccgaacagatcaaactgctt
catcaggtcgctctccgacgcattgcgtggcgtacgcaacacgcactcgtatttaaagac
cgccccgactatcgctttattctgggagaaaacggtgccgttttagacattatcactgag
catcgccgcatggctaaccgcattgttgaagagtccatgattacggcaaacatttgtgca
gcccaagtgctaaagcagaagttaggctacggcattttcaatacccacgcaggttttgat
cccgcacaggttgaacaggctgtagaggttttaaaaaataacaatgttgtctttgataaa
gacgaactgttaacgctggacggtttttgtcgtctacggcgcattcttgacgaacggcca
acctcctatctagacagtcgaatcaggaagtaccaaacctacgcagaagtgagcacagag
cccgcacctcactttggtctgggattagatgcctatgcaacctggacatccccaatcaga
aaatatggcgatatcattaaccatcgtttgctgaaggcgcttattcacggccaaccttcc
agcgctcctgatagcagcgttatgcagccgcttgtcgatcgccgacgcgctaaccgcctg
tctgaacgcgatgtcagcgactggctatacgcgcgctttcttcaggataaagcgggaagc
ggtgtttgctatcaggcagagattatcgatatttcacgcggcggaatgcgcgtaaaactg
ttagaaaacggtgccgttgcctttattcctgccccctttattcattctgtgcgcgatgag
ctgatctgtagtcctgaaaatggcaccattcagctaaaaggtgagccgctttatcagcag
ggagataccattagcgttaccattgaagaggttcgcatcgaaacacgctcagtcatcgcc
cgtccagcgccatcgttagcctaa
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