Leminorella richardii: NCTC12151_01943
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Entry
NCTC12151_01943 CDS
T05503
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lri
Leminorella richardii
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_01943 (sbcC)
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12151_01943 (sbcC)
Archaeal homologous recombinant proteins
NCTC12151_01943 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
TsaE
nSTAND3
cobW
ABC_tran
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
SQI41088
UniProt:
A0A2X4UZ34
LinkDB
All DBs
Position
1:2052111..2055791
Genome browser
AA seq
1226 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTRPPFCDNALFAITGPTGAGKTTLLDAICLALYHKTPR
LTVSPTQNDLMTNYTAESLAEVEFDVQGVGYRAFWSQRRAKGLADGNLQAPKVELAYLSD
GKIITDKVRDKIDAIAQITGLDFGRFTKSMMLSQGEFAAFLNAEPNERAELLEELTGTEI
YGQISERVFLRHKEAKSELDTLYARFDGVRTLNDDELSQLHQQEQHLRHQEKTLSQDIQR
LTNDTQWLAQHDDNQQQLTSAQQRLTAAQEALRHHTAELTRLQHSEPAEKLMPLYRERQR
LRDETLTLTHSVAQLKTEAASLHQVAEQSQQAYEQEEKALATLLADHEQTRALIDERVTP
LDLRISTRRQELEQWTAQKTDLTVQHQNAVSAHGALISRCATVEQRQRELNDYFTQYSTY
AQWGENLPLWQSQLEDLAQQSAEQDRLHQDIHQRRQELATVEQSLTQAAEEQHLEQERLI
AQQSALESLQQQYQALTLDDDLPSLRQQRLALASAREKVRELSQLQLRHSETQARRISLC
ERKAQLAASIEQQRAQQQTCQRALDDKQAHLADLDTLHQQESLLARFAQERAQLQSGSPC
PLCGATEHPLGAESDPLVHSNSTERLAVLKAEVQQLHDDAIRLISQIHAQEEEAQRLHVE
TASLDSLLADLQNQWLTLSQESEAAFSIDDEHGLIESLNTLQQREQLLDERLQALERGEK
ALQQHQSLLSQQTASLKEAQLRVTLLTQDVAHSKQQCQQSEDLFKALEHTYQHRLTQLRQ
QLETFTLSLPSAENATSWLTLRRNEWQQWQTNRAEFTAVEQQAAAINAEISGLQSQLSLI
ATRLHDVEAQYCTCRDNVERLIQERQQIFGEQSVTQALRQMAEARSEREQSLTQRRQLAQ
RSHSERQSLIGRLSALEQQFQQHQELQQRQEQHFHQAIVDSAFSDESAFLAACLSDEERQ
SLSLLKERLTTELTQASALAQSAEQRLQQHLTARPAHLAQDETRQELAQRITLLSQELRA
NGVLQGEVKQKLAEDILSRERQGELQKLIAHHQQSLDDWAMLNALIGASDGAKFRRFAQG
LTLDHLIYLANRQLDRLHGRYQLQRKEDGALEMQVIDTWQADSVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDIALDALDNLNASGKTIGVISHVDAMK
ERIPVQINVKKINGLGVSKLDDRFKN
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattctcagcctgcgcctcaaaaatattaattccctcaagggcgagtggaaaatc
gactttacccgcccgcccttttgcgacaacgcgctgtttgccattacgggcccaaccggc
gcaggtaaaaccaccctgctggacgctatttgtctagctctttaccacaaaacgcctcgg
cttaccgttagcccaacgcaaaacgatttgatgacaaactacacggccgagtcgctggcc
gaagtcgaattcgacgttcagggcgttggctatcgcgcattttggagccagcgtcgagcc
aaaggcctagctgacggcaacctgcaggcacccaaagtagagctggcctacctgagcgac
ggaaaaatcattactgataaagttcgcgacaagattgacgctatcgcgcaaatcactggt
cttgattttggtcgcttcacgaagtccatgatgctctctcagggagagttcgccgccttt
ctgaatgctgaacccaacgaacgagccgagcttttagaagagctcaccggtacagagata
tatgggcagatatccgagcgggtctttcttcgccataaagaagccaaaagcgagctggat
acgctgtacgcgcgatttgacggcgttcgcacgctgaatgacgacgaactaagccagcta
caccagcaggaacagcacctgcgccatcaggaaaaaacgctaagccaagatatccagcgc
ctaactaacgacactcaatggctagctcaacacgatgacaaccagcagcagttaacctca
gcacagcagcggcttactgccgctcaagaggcactccggcatcacacagcagagctaacc
cggctacagcacagcgagccagcagaaaagctgatgccgctttatcgtgaacgccagcgg
cttcgcgatgaaacccttacactcactcatagtgtggctcagctgaaaacagaagccgcc
agtcttcaccaagtcgctgagcagagccagcaggcctatgaacaagaagaaaaggcgctg
gctacccttcttgctgaccatgagcaaacccgggcactgattgatgagagggttactcca
cttgatctgcgtatctcaactcgacgccaagagctagaacagtggacggctcaaaagaca
gatttaactgttcagcatcaaaatgccgtttccgcccatggggcattgatctcgcgatgt
gcgaccgtagagcagcggcagcgcgagctgaacgactactttacccaatacagcacctac
gcccagtggggtgaaaatctccctctctggcaaagccagctagaagatttggctcagcag
agcgccgaacaggatcgactccatcaggatattcaccaacgccgccaagagctggctacc
gtagagcaatccctgactcaggcggcagaggagcagcaccttgaacaagaacgcctcatt
gctcagcagagcgcccttgaaagcctacagcagcagtatcaggccttaacgcttgatgac
gacctgccctcacttcgacaacagcgactcgctttagccagcgcgcgagaaaaggttcgc
gagctatcccagctacagcttcgacattcggaaacacaggcaagacgcatcagcctttgt
gagcgaaaggcccagttagcagccagtatcgaacagcaaagggctcagcagcaaacctgt
cagcgagcccttgacgataaacaggctcatctggcagatctcgatacccttcaccagcag
gaaagcctgctggctcgcttcgctcaggagagagcccagcttcagtctgggagcccttgc
cccctttgtggcgcaacggaacatcctcttggtgcagaaagcgatccgctcgttcacagc
aacagcacagagcggctcgccgtattaaaagcagaagtacagcagttacatgacgacgct
atccgcttaatcagccagatccacgcgcaggaagaagaggctcaaaggctacatgttgaa
accgcctctctggacagccttcttgccgatctccagaaccagtggctcaccctcagccaa
gagtcagaggcagcattcagcattgatgatgagcacggcctgattgaaagccttaacaca
ctacaacagcgcgaacagctcctcgatgagcgccttcaggcgctggagcggggagaaaag
gcgcttcaacagcaccagtcactgttaagccagcaaactgccagcctgaaagaggctcag
ctgcgtgtaacgctgctgacgcaggacgttgcccacagcaaacagcagtgccagcagtcg
gaagatctattcaaagcattagaacacacctaccagcatcgactgacacagctccgccag
cagctggaaacatttacactgtccctgccttctgccgaaaatgcgacctcatggcttaca
ttacgcagaaacgagtggcaacagtggcagacaaaccgtgcagaattcactgcggtggaa
cagcaggcagcagcgataaatgccgaaataagcgggctacagagccagctatcgcttata
gcaacgcgcctgcatgacgtcgaagctcaatactgtacctgccgtgataacgttgagcgc
ctcattcaagaacgccagcagatatttggcgagcaatcagtaactcaagccttacgccag
atggctgaagcgcgttctgaacgtgaacagtccttaacgcagcgccgtcaactcgcccag
cgcagtcacagtgagcgtcagtcccttattgggcgactgtcggctctcgaacagcagttc
caacagcaccaagagctgcaacagcggcaggaacagcattttcatcaagctattgtagac
agcgcgtttagcgatgagtccgcctttttagcagcttgcctcagcgatgaagaacggcag
tcactcagtttgttaaaagaacgcctgacaacggagctcactcaagcctccgccctcgct
cagtcagccgaacagcgtcttcagcagcatctaacggctcgcccggcgcatcttgctcag
gatgaaacgcgtcaggaacttgctcagcgcattactctactttctcaagagcttcgcgct
aacggggttcttcagggggaagtaaagcaaaaactggctgaagatattctctcccgcgaa
cgtcagggagaactacagaagcttatcgcccaccatcagcaatccttggacgattgggcg
atgctcaatgcgcttattggtgccagcgacggtgccaagtttcgccgctttgctcagggg
ttaacgcttgatcatctgatatatctggctaaccgccagctcgacaggcttcacgggcgc
tatcagcttcagcgaaaagaggacggcgcactggaaatgcaggtgattgacacttggcag
gcagacagcgtgcgcgatactcgcaccctctctggcggggaaagctttctagtcagtctg
gctctggcgctggcgctctccgatctggttagtcataaaacccgcatcgactcactgttt
cttgacgaaggatttggcacgctggacagcgaaaccttggacatcgcgctggacgcgctg
gacaacctcaatgccagtggaaaaaccataggcgtcattagccatgttgatgccatgaaa
gagcggatcccagtacaaatcaacgtgaagaagataaatggactcggcgtcagtaaattg
gatgacaggttcaaaaattag
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