Leminorella richardii: NCTC12151_02433
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Entry
NCTC12151_02433 CDS
T05503
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
lri
Leminorella richardii
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lri03009
]
NCTC12151_02433 (srmB)
Enzymes [BR:
lri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12151_02433 (srmB)
Ribosome biogenesis [BR:
lri03009
]
Prokaryotic type
rRNA helicases
NCTC12151_02433 (srmB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
CMS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SQI41951
UniProt:
A0A2X4UT00
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All DBs
Position
1:2567394..2568725
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AA seq
443 aa
AA seq
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MTVLDFSALELDQPLLDALNDKGYVRPTAIQSAAIPPAMEGRDVLGSAPTGTGKTAAFLL
PVLQHLLDTPRKKSGPPRVLILTPTRELAMQVADQARELSAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEVLILDEADRMLDMGFAQDIEHIAGETRW
RQQTMLFSATLESEAINDFAERLLKDPVRVEAEASRREKNKIHQWYYRADELTHKTALLC
HWLKQPEVSKAIVFVRKRERLHELVRWLREADINCFYIEGEMVQAKRNEAIKRLQEGTVR
VLIATDVAARGLDILDISHVFNFDMPRTADTYLHRIGRTGRAGKKGVAVSLVEAHDHPLL
EKIERYLKEPIKMRVIDELRPTTKTPKPGDHKPSKKAKAKAAEKRKEKSKEKKVKVRHRD
SKNVGKRRTPAAAAAAESSPKES
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattagatttttccgcactagaactcgaccagccgctgttagacgccttgaac
gacaagggctacgttcgcccgacggcgatccagtcagccgctattccacccgcgatggaa
ggccgtgacgttctcggctcggcgccgaccggtacgggtaaaaccgctgcctttctgctc
cctgttcttcagcacctgctcgatacgccgcgtaaaaagtcagggccgcctcgcgtgctc
attctgacaccaactcgagagctggcaatgcaggtcgccgatcaggcgcgagaactgtct
gcccacactcacttagacatcgccaccatcaccggcggcgtggcctacatgaatcacgcc
gaagtgttcagtgaaaatcaggacattgtcgtcgccactactgggcggcttttacagtat
ataaaagaggagaacttcgactgccgcgccgttgaggttcttattcttgacgaagccgac
cgcatgctcgacatgggatttgctcaggatatcgagcatatcgcaggggaaacccgctgg
cgccagcagaccatgctgttctccgccacgctggaaagtgaagctatcaacgactttgcc
gagcgtctgcttaaagatccggtccgcgtggaggctgaagcttcccgtcgtgaaaaaaat
aaaattcaccagtggtactaccgcgcggacgagctgacacacaaaaccgccctgctctgc
cactggctgaagcagcctgaagtcagcaaggctatcgtgtttgtccgcaagcgcgaaagg
ctgcacgagctggtgcgctggctgcgggaagccgacatcaactgcttctatatagaaggc
gagatggtgcaggccaagcgcaacgaagccatcaagcgacttcaggaaggcacggttcgg
gttcttattgctacggacgtcgccgcgcgcggtctggatattctggacatcagccacgtc
tttaactttgatatgccgcgcacggcggacacctatttacaccgtatcggccgcactggc
cgcgcagggaaaaagggcgtcgctgtttcgctggttgaagcccatgaccacccgctgttg
gaaaagattgagcgctacctgaaagagccaatcaaaatgcgtgtcattgatgagcttcgc
ccgaccacgaaaacgccaaagccgggcgaccacaagccgtccaagaaagccaaggccaaa
gcggcggaaaagcgcaaagaaaaaagtaaagagaagaaagtgaaggttcgccatcgcgac
agcaagaacgttggcaagcgccgtacgcccgccgcagccgcagccgcagaatcttcacca
aaagaaagctaa
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