Leminorella richardii: NCTC12151_02642
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Entry
NCTC12151_02642 CDS
T05503
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lri
Leminorella richardii
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lri03021
]
NCTC12151_02642 (rapA)
Transcription machinery [BR:
lri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCTC12151_02642 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_1_RapA
DEAD
Cas3-like_C_2
NAT10_TcmA_helicase
COG2_N
DUF7007
Motif
Other DBs
NCBI-ProteinID:
SQI42592
UniProt:
A0A2X4V7A3
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All DBs
Position
1:2785505..2788354
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AA seq
949 aa
AA seq
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MVAVDARTVTLLFPAIGENRLYARKDAPITRVAFNPGDRVTSHEGWQLIVDEVKETDGVL
TYIGQKVDGDESPVSLREIMLDSKLTFSKPQDRLFAGQIDRMDRFSLRYRARKYQSEQYR
MPWSGLSGIRASLIPHQLHIAHEVGRRHAPRVLLADEVGLGKTIEAGMIIHQQLLVGQVS
RVLIVVPETLQHQWLIEMLRRFNLHFSLFDHSRVAEAMQQDAENPFETEQLVICSLDFIC
QLDAKQQALMVDAGWDMLIVDEAHHLEWSETAPSIQYQAVEQLAQSIPAVLLLTATPEQL
GQESHFARLRLLDPNRFHDYREFVAEQQKYKPVADAVSLLVGGETLNNDALNALGELISE
QDIEPLLKAANLKSDEGENARQELVTMLMDRHGTSRVLFRNTRQGVKGFPLRYLHQIKLP
LPAQYQTAFKVARMMNGTEPLSSRAHDMLYPEQIFQSLEGDGISWLNFDPRAQWLIDYLK
QNRQEKVLVICAKAATALQLEQVLREREGIYAAVFHEGLSLVERDRAAAWFAERDNGAQV
LLCSEIGSEGRNFQFANRLVMFDLPFNPDLLEQRIGRLDRIGQSRDIHIMVPYLEDTAQA
ILIRWFHEGLDAFEHTCPTGRPVYDAVHDDLMGYLSEPSKQEGFDDFIARSREKHLDLKA
QLENGRDRLLEMNSNGGERAQALANDIGEQDNNVDLIGFTLNLFDIVGINQDDDTDNVMI
LTPSDHMLVPDFPGLPQDGCTITFDRETALSREDAQFISWEHPIVRNGLDLILSGDTGSS
AVSLLKNRALPVGTMLVELIYVVEAQAPKNLQLTRFLPPTPVRLLLDRKGSDLAGSVEFE
SFNRQLNAVNRHTGSKLVNAVQKEIHDVLQMGERLIEERASVLIDAARREADDTLEQELS
RLNALKAVNPTIRDDEPKAIEQTRQQILECLKQATWRLDALRLIVVTHQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcagtggacgcgcgcacggttaccctgctgtttcccgccattggcgaaaatcgc
ctgtacgcgcgtaaagacgcgccaatcactcgagttgcattcaatcccggagatcgcgta
accagtcatgaaggctggcagctcatcgttgatgaggtaaaagagactgacggcgttctc
acctatatcggccaaaaggtcgacggtgatgaatcccctgtctccctgcgggaaattatg
ctcgacagcaagcttacctttagtaagccgcaggaccgtctgttcgctgggcaaatcgac
cgcatggatcgctttagcctgcgctatcgcgccagaaagtaccaaagcgagcagtaccgc
atgccttggagcggcctgagcggcattcgcgccagccttatcccccatcagctgcacatt
gcccatgaagtgggccgccgccacgcaccgcgcgtgctgctggcagacgaagtcggttta
ggtaaaaccattgaagccggtatgattattcaccagcagctactggtgggtcaagtaagc
cgcgtgctgatcgtcgtgccggaaacgctacagcatcagtggctgattgaaatgctcagg
cgcttcaatctgcacttctctctgttcgatcactcccgcgtggcagaagccatgcagcag
gatgcggaaaacccgtttgaaacggaacagctggtcatctgctcgctggactttatttgc
cagctcgatgccaaacagcaggcgctgatggttgacgctggctgggatatgctgatcgtt
gacgaagcgcaccaccttgagtggagtgaaactgcgcccagcatccagtatcaggccgtt
gaacaactggcacagagcatccctgccgttctgcttttgaccgcgacgccagaacagctt
ggtcaagaaagtcacttcgctcgcctgcgccttttggatccaaaccgcttccacgactat
cgcgagtttgttgctgaacagcaaaaatacaagccggttgccgacgcagtcagtctgctg
gttggtggagagactctgaataacgatgccctcaacgcccttggcgagctgattagcgaa
caggacatcgagccgctactcaaggctgcaaacctgaaaagcgacgaaggagaaaacgcc
cgccaagagctggttaccatgctgatggacaggcacggcaccagtcgcgtgctgttccgc
aatacgcgtcagggggtaaaaggcttccctctgcgctatctgcaccagatcaagctgccg
ctacccgcacagtaccaaacggcgttcaaagtcgcccgcatgatgaacggcactgagccg
ctctcctcgcgcgctcacgatatgctttaccccgagcagattttccagtcactggaaggc
gacggcatcagctggctcaactttgacccgcgcgcgcagtggctcattgactacttaaag
caaaaccgtcaggaaaaagtgctggtgatttgtgccaaggccgctacagcgcttcagcta
gagcaggtgcttcgcgaacgcgaaggcatctacgccgcagtgttccacgaggggctatcg
ctggttgagcgcgaccgcgctgccgcctggttcgccgagcgcgacaacggcgctcaagtg
ctgctgtgttctgagatcggctctgaaggccgtaacttccagtttgctaaccgcctggtt
atgttcgatttgccgttcaatccagacctgctggaacagcgcatcgggcgtctcgaccgt
attggccaaagccgcgatatccacattatggtgccctatctggaggataccgctcaggcg
atccttatccgctggttccatgaagggctcgacgcctttgaacacacctgtcctactggg
cgcccggtatacgacgccgttcacgatgacctcatgggttatctgtctgaaccgtcgaaa
caggaaggctttgacgactttattgcccgcagccgtgaaaagcaccttgatctcaaagcg
cagctggaaaacggccgcgaccgcctgctggaaatgaactctaacggcggcgagcgcgca
caggcgctggctaacgacatcggcgagcaggacaacaacgttgatcttatcggttttacc
ctcaacctgtttgacatcgtgggcatcaatcaggatgacgacaccgataacgtcatgatc
ctcacgccatccgaccacatgctggtgccagactttcccggactgccgcaggacggctgc
accattaccttcgatagggaaacggctctgtcccgagaggacgctcagttcatcagttgg
gaacaccctatcgttcgcaacggcctcgaccttattctgtcgggagataccggcagcagc
gccgtttctctactgaaaaacagggcgctgccggtcggcaccatgctggtagagctgatt
tacgtggtagaagcgcaggcgcctaaaaacctacagcttacccgcttcctgcccccgact
ccggttcgcctgctgcttgaccgcaagggtagcgatctggcgggcagcgtggagttcgaa
agcttcaaccgccagcttaacgctgtcaaccgacatactggcagtaagctggtaaacgcg
gttcaaaaagagatccacgacgttctgcaaatgggcgaacgcctgatagaagagcgcgcc
agcgtgctgatcgatgcggctcgccgcgaggccgacgacacgctagagcaggaactgagc
cgcctaaacgccctgaaagccgtgaacccgaccattcgggacgacgagccaaaagccatt
gagcaaacgcgccagcagatcctagagtgtctaaagcaggcaacctggcggcttgacgcg
ctgcggctcattgttgtcactcaccagtag
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