Leminorella richardii: NCTC12151_02959
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Entry
NCTC12151_02959 CDS
T05503
Symbol
csrD
Name
(GenBank) Regulator of CsrB and CsrC decay CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
lri
Leminorella richardii
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lri03019
]
NCTC12151_02959 (csrD)
Messenger RNA biogenesis [BR:
lri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC12151_02959 (csrD)
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GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
RH1
Motif
Other DBs
NCBI-ProteinID:
SQI43302
UniProt:
A0A2X4V9B8
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Position
1:complement(3136364..3138310)
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AA seq
648 aa
AA seq
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MGMRFTARLSVFMSILVFLTVLLALLTSVLSVYLVGGNKMDSHWQPLIETADRALTSQSE
AVYSYGLPTVMSATGASRLAITDAQGKAIYSHHIDAHLNFWRHFHTESSTDIELDNHPGF
TLHITYADPILSTLFSLPFFLSVMAVVSLIVVIVFLWLRWLKRQFKGVELLEARAWRILS
GEREDAMAVDVREWPVHASAAIDRLLMELKNMGEERVRVDKLIRSFAAQDAQTGLNNRLF
FDNQLATQLEEPGAHGVVMIVRLPELELLVEEYGNAVVDDLLYMLVNMLSTFIMRHPAAL
LARYFSNDFSVILPHRSLKDADGIAAQLVSAIDSLPLPPNVEKDSLIHIGVCGYQGGQSP
EQIMDNAEHAARAAVLQGGNSWFIYENQTAPLVRGSVCWRTLLEQTLSRGGPNIYYKPAV
TVDNVLSHREMLLRIKDGDDELQPAEFMPLIQQFGMAERFDRMVLSKTLPLLDCWPEDTI
AVSITVDSLLKHSFQIWLRDHLLEREKSARKRIIFELAEADVCQYSDRLRPVIRLLHGLG
CRLGVVQAGLTVVSSSMYVKSIPVEVIKLHPGLVRNIDKRPENQLFVDNLMAACEGTSVV
VMAASVRTRAEWETLLSRGVVGGQGEFFASPKPIPYFKEKNSRQNRQF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgagatttaccgccagactgtccgtttttatgtccatactggtgtttctaacc
gtattactggcgctgctgacgagtgttctgagcgtttatctggtcggtggaaacaagatg
gacagccactggcagccgctaatagagactgcagatcgggcgctgaccagccagtccgag
gctgtctacagctacggattgccgacagttatgtcggcgaccggcgcgagccgtctagcg
attactgacgcgcagggaaaggcgatttactctcaccatatcgacgctcatcttaacttc
tggcgtcattttcatactgaaagcagtactgacatagagttagacaaccatccgggattt
acgctgcatatcacctatgcggaccctattttaagcacgctgttttctctgccgtttttc
ctgtccgttatggctgtggtttctcttattgttgtcattgtctttttgtggttgcggtgg
cttaagcgtcagttcaaaggggttgagctgctggaggcgcgcgcgtggcgtattctgtcc
ggcgagcgagaagacgccatggctgttgacgttcgcgagtggcccgttcacgccagtgcg
gcgatcgatcgcctgctgatggagctgaagaatatgggcgaggagagagtcagggtcgat
aagctgattcgctcttttgccgcgcaggacgcgcaaactggtctgaataaccggctattt
tttgacaatcagctggcaacccagttggaagagcccggcgcccacggcgtagtgatgatt
gtgcgcctgccggagctggagttactggtggaggagtacggtaacgcggtggttgacgat
ctgctgtacatgctggtcaacatgctgtctacctttattatgcgccatcccgcagcgctg
ctggcgcgctatttcagtaacgactttagcgttattttaccccatcgctctctgaaagat
gctgacggtattgccgcccagttagttagcgccattgatagcctgccgctgcctccaaat
gtcgagaaagacagcctgatccacattggcgtttgcggctatcagggagggcagtcgccg
gaacagattatggacaatgctgaacatgccgcgagggctgctgtactgcaaggaggcaac
agctggtttatttatgaaaatcagactgcgcctctggttagaggcagcgtttgctggcgt
actctgctagagcaaactctatcccgcggcgggccaaatatttactacaagccagcggtg
acagtagataatgtactgagccatcgggaaatgctgttgcgcatcaaagacggtgatgac
gagcttcaacccgccgagtttatgccgctgattcaacaatttggtatggcagaaaggttc
gaccgaatggtactgagtaaaactttgccgctgttggactgctggccagaagataccatt
gcggtttcgatcactgtcgactcgctgctaaaacactccttccagatttggctgcgcgat
catctgctggaaagagaaaaatcggcgcgaaagcgaattatatttgaacttgcagaggca
gacgtttgtcaatatagcgaccgactgcggccggttattcgactgctgcatggattagga
tgccgtctgggcgttgttcaggcgggcttaaccgtggtgagtagttcgatgtacgtgaag
tctatacctgtggaggtgattaagctccaccctgggctggtgcgtaatattgacaaacgt
cctgagaatcagctgtttgtcgataacctgatggccgcctgtgaggggacatccgtggtg
gtgatggccgctagcgtgagaacgcgcgccgagtgggaaactctgctttctcgcggcgta
gttggcgggcagggtgagttttttgcttcgcctaagccgataccctacttcaaagaaaaa
aatagtcgacaaaatcgtcaattttaa
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