Leminorella richardii: NCTC12151_03268
Help
Entry
NCTC12151_03268 CDS
T05503
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lri
Leminorella richardii
Pathway
lri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12151_03268 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lri03021
]
NCTC12151_03268 (rpoB)
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_03268 (rpoB)
Enzymes [BR:
lri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12151_03268 (rpoB)
Transcription machinery [BR:
lri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12151_03268 (rpoB)
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12151_03268 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-ProteinID:
SQI43830
UniProt:
A0A2X4VEV6
LinkDB
All DBs
Position
1:complement(3490762..3494790)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQHGLEAAFRSVFPIQ
SYSGSSELQYVSYRLGEPVFDVKECQIRGVTFSAPLRVKLRLVIYDRDAPAGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNFTSEEILGLFFDKVVFEICDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRLLEKDGVDKIEVPTEYIIGKVSAKD
YIDEATGEIICPSNMELTLDLLAKMSVAGHKRIETLFTNDLDHGAYMSETLRVDTTTDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLGRDEIEGSGIL
SKEDIIEVMKKLIGIRNGIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNFVIAQANSNLTDEGRFIEDLVTCRNKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVATR
GGTVQYVDASRIVIKVNEDEMMPGEAGIDIYNLTKYTRSNQNTCINQMPCVALDEKVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELSCVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTIIDVQVFTRDGVEKDKRALEIEDMQLKQVRKDL
TEELKILEAGLFARIHDVLVAGGIEDEKLSKLTHDKWLEIGLSDEDKQNQLEQLAEQYDE
LKSEFEKKLEGKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGDNTRQGVDLNTFSDEEVLTLAENLRKGMPIATPVFDGAKEKEIKELLT
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttttggacataccataccttctttctatccagcttgactcgttccagaagtttatcgag
caagatccggaaggccaacacggcctggaagcagcattccgctccgtgttccctatccag
agctacagcggcagctcagagctgcagtatgttagctatcgcctcggtgagcctgtattc
gacgtcaaagagtgtcaaatccgcggtgtaaccttctctgcgcctctgcgcgtgaagctg
cgtctggtgatctacgatcgcgacgcgccggcgggcacggttaaagacattaaagagcaa
gaagtctacatgggcgaaattccgctcatgaccgataacggtacgttcgtgattaacggt
accgagcgcgttatcgtttcccagctgcacagaagtccaggtgtcttcttcgacagcgac
aagggcaagactcactcatcaggcaaggtgctgtataacgcacgcattatcccttaccgc
ggttcatggttagactttgagtttgacccgaaagacaacctgtttgtccgtattgaccgt
cgtcgcaagctgcctgcaaccattattctgcgcgcgctgaactttacttcagaagaaatt
ctgggtctgttcttcgataaagtcgtctttgaaatttgcgacaacaagctgcagatggaa
ctggttcctgagcgcctgcgcggtgaaacggcttcttttgatatcgaagccaacggcaaa
gtttatgtagaaaaaggccgtcgcattactgctcgccacattcgcctgttggaaaaggac
ggcgtcgacaagatcgaagtgccaaccgagtacatcatcggcaaagtgtctgcgaaagac
tatatcgacgaagcgactggcgaaatcatttgcccatctaacatggagctgacgctggat
ctgctggccaagatgagcgtagctggtcacaagcgcatcgagacgctgtttaccaacgat
ctcgatcacggcgcctacatgtcagaaacgctacgcgttgataccacaaccgatcgcctg
agcgcgctggttgaaatctatcgcatgatgcgcccgggcgagccgcctacgcgcgaagcg
gctgaaaacctgtttgagaacctgttcttctccgaagatcgctatgacctttctgcggta
ggccgcatgaagttcaaccgctctttgggccgtgatgaaatcgaaggttccggcattctg
agcaaagaagacatcatcgaagtcatgaagaagctcatcggtatccgtaacggtatcggt
gaagtggatgacatcgaccacttgggtaaccgtcgtatccgctccgtcggcgaaatggcc
gaaaaccagttccgcgtaggtctggttcgcgttgagcgtgcggtgaaagagcgtctgtcc
ctgggcgacctcgataccctgatgcctcaggacatgatcaacgccaagccgatttcggcg
gcggtgaaagagttcttcggctcaagccagctgtcccagtttatggaccaaaacaacccg
ctgtcagaaatcacgcacaagcgtcgtatttctgccctcggcccaggcggcctgacgcgc
gaacgcgcgggctttgaagttagagacgtacacccgactcactacggtcgcgtatgtcct
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtatgcacag
actaacgaatacggcttccttgagactccgtaccgtaaagtgactgacggcgttgtcacc
gacgagatccactacctgtctgccattgaagaaggcaacttcgttatcgctcaggcgaac
tccaacctgaccgacgaaggccgcttcatcgaagatctggtcacctgtcgtaacaagggc
gagtccagcctgttcagccgcgatcaggttgactatatggacgtatcaacccagcaggtg
gtttccgttggtgcttctctgattccattccttgagcacgacgatgctaaccgcgccctg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgacaagccgctggta
ggtacaggtatggaacgcgccgttgccgttgactccggtgtaacctctgttgcaacccgc
ggcggtactgttcagtacgtcgacgcatctcgtatcgttatcaaagttaacgaagacgaa
atgatgccgggcgaagcgggcattgatatttataacctgaccaagtacacccgttctaac
cagaacacctgtatcaaccagatgccgtgcgtggcgctggatgagaaggttgagcgcggt
gacgtgctggctgacggcccgtctaccgacctcggtgagctggcgctgggccaaaacatg
cgcgtagcgttcatgccttggaacggctacaacttcgaagactccattttggtgtccgag
cgcgtggttcaggaagacagatttactaccatccacattcaggaactctcctgcgtgtct
cgcgacaccaagctggggcctgaagagatcactgccgacatccctaacgtgggtgaagcc
gcgctctccaagctggatgaatccggtatcgtttatatcggcgcagaagtgaccggtggc
gacattctggtgggtaaggtaacgcctaagggtgaaacccagctgactccagaagaaaag
ctgctgcgcgctatcttcggtgagaaggcgtctgacgttaaagactcttccctgcgcgtg
ccgaacggcgtatccggtaccattattgacgttcaggtatttacccgcgacggcgtagaa
aaagacaagcgtgctcttgaaatcgaagacatgcagctgaagcaggtcagaaaagacctg
accgaagagctgaagatcctcgaagctggcctgtttgcccgtatccacgacgtgttggtt
gccggcggcatcgaagacgagaagctttccaagctgacccacgacaagtggctggaaatc
ggcttaagtgacgaagacaagcaaaaccagctggaacagctggccgagcagtatgacgag
ctgaagtccgagtttgagaagaagctggaaggcaagcgtcgcaagatcactcagggcgac
gacctggctccgggcgtgctgaagatcgttaaggtttatctggccgttaagcgtcagatc
cagccgggcgataagatggcaggccgtcacggtaacaagggtgttatctccaagatcaac
ccgatcgaggatatgccttacgatgagaacggcacgccggtcgatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacctgggtatggct
gcaaaaggcatcggcgacaagatcaacgctatgcttaagcagcagcaggaagtagccaag
ctgcgcgagtttatccagaaggcttacgatctgggcgacaacacccgtcagggcgttgac
ctcaacaccttcagcgatgaagaagtgctgacgctggcggaaaacctgcgtaagggtatg
ccgatcgcgacgccggtgtttgacggcgccaaagagaaagaaattaaagagctgctgacg
ctgggcggtttaccgacctcaggtcagatcacgctgtttgatggacgtaccggtgagcag
ttcgagcgtccggttaccgttggctacatgtacatgctgaagcttaaccacctggttgat
gacaagatgcatgcacgctctaccggttcttatagcctggttactcagcagccgctgggt
ggtaaggcacagttcggtggacagcgcttcggtgagatggaagtgtgggcgctggaagcc
tatggcgcagcgtacacgctccaggagatgctgaccgtcaagtccgacgatgtcaacggc
cgcaccaagatgtacaaaaacatcgtggatggcaaccatcagatggaaccgggcatgccc
gagtctttcaacgtattgctgaaagaaatccgttcgctgggtatcaacatcgagttggaa
gaggaataa
DBGET
integrated database retrieval system
