Leminorella richardii: NCTC12151_03560
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Entry
NCTC12151_03560 CDS
T05503
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lri
Leminorella richardii
Pathway
lri03420
Nucleotide excision repair
lri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12151_03560 (uvrD)
03430 Mismatch repair
NCTC12151_03560 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_03560 (uvrD)
Enzymes [BR:
lri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12151_03560 (uvrD)
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12151_03560 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC12151_03560 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
SQI44239
UniProt:
A0A2X4V0U2
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All DBs
Position
1:complement(3798971..3801133)
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AA seq
720 aa
AA seq
DB search
MDVSLLLDSLNDKQREAVAAPRTNMLVLAGAGSGKTRVLVHRIAWLLSVERCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIRAMNLDEKQWPPRQAMWYINNKKDDGLRPSHVETYGNLTEGTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLHKPQILNHYRERFTNILVDEFQDTNRIQYAWIRMLAGET
GKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAQTVRLEQNYRSTKNILTAANALIANN
DGRLGKELWTDGDAGEPISLYCAFNELDEARFVVSRVKAYQDGGGALNDCAFLYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDSLAYLRLIANPNDDAAFERVVNTPTRGIGD
RSLDVIRHAARDRQVTLWQAAAALLSEKVLAGRAAAAVQRFIELIEALTRETGELPLHVQ
TDRVIRDSGLRQMYEEEKGEKGQARVENLEELVTATRQFSFQDEDMNLTPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFQQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPQECIEEVRLRASVSRPVSHSRMG
TPISQNDSGYRLGQRVSHPKFGEGTIINLEGSGEHARLQIAFQGEGIKWLVASYARLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccctcctgctcgacagcttgaacgacaaacagcgcgaagccgtggcggct
cctcgtaccaacatgctggtgctggccggagccggtagcggaaaaacacgagtgctggtg
caccgcatcgcctggctactgtccgttgagcgctgctctccctattcaattatggcggta
acctttaccaacaaggctgccgcagagatgcgtcaccgcattgagcatctgatcggtacc
agtcaggggggcatgtggatcggaacgtttcacgggttagcgcatcgactgctgcgtgct
caccatcttgacgccaatttgccgcaggattttcagatcctcgacagtgaagaccagctg
cgactgctcaagcgccttattcgcgccatgaatcttgatgaaaagcagtggccgcctcgt
caggcaatgtggtacatcaacaataaaaaagacgatggcctacggccttctcatgttgaa
acctacggtaatctcactgaaggcacttggctgcgtatctatcaggcctatcaggaggca
tgcgaccgcgcagggctggtggatttcgccgagctgcttttacgcgctcacgagctgtgg
ctgcacaagccgcagatccttaaccactaccgcgagcggttcaccaacattctggtggac
gaatttcaggacaccaaccgcattcagtacgcctggatccgcatgctggcaggagagacc
ggcaaagtcatgatcgtgggtgatgacgaccagtccatttacggctggcgcggcgctcag
gtagagaacattcagcgctttctcgacgattttcccggtgcgcaaacggtgcggctggag
caaaactatcgctcgacgaagaatatccttactgcggctaacgccctgattgccaataac
gacggtcgtctggggaaagagctgtggaccgacggggacgcaggcgaaccaatttcactg
tactgcgcgtttaacgagctggacgaagctcgctttgtagttagtcgtgtcaaagcctat
caggacggtggcggagcgctgaatgactgtgcgttcctctaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgcttcttcaagcgtcgatgccgtaccgtatctacggcggcatg
cgattctttgagcgtcaggaaatcaaagactcactggcctacctgcggcttattgctaac
cctaacgatgatgcggcgtttgagcgcgtggttaacacgccgacgcgcggcattggcgat
cgctcgcttgacgttattcgtcatgcagcccgggatcgtcaggtcaccctatggcaggcc
gctgccgcgctgctttccgaaaaggtgctggctggccgagccgctgctgccgtacagcgc
tttattgagctgattgaagcgttaacccgggaaaccggcgagctgccgctgcacgtccag
actgaccgtgtgatccgagattccggcctgcggcagatgtacgaggaagagaagggcgag
aaaggccaagctagagtagaaaacttggaagagctggtcacggctacccgccagtttagc
tttcaggatgaggatatgaatctgacgccgctgcaggcgtttttatcccacgccgccctt
gaggcgggagaagggcaggccgacgcctatcaggacgcagtacagctgatgacgcttcac
tccgcgaaaggcctagagttccaacaggtgtttatcgttggtatggaagagggtatgttc
cctagccaaatgtcgctggacgaaggcgggcgtttggaggaagagcgccgcttggcctat
gtcggcgtgacgcgggcaatgcagaagctgacgctgacctacgctgaaacgcgccgtctg
tacggcaaagaggtgtatcatcgcccgtcgcgctttgtcggcgagctgccgcaggagtgt
atagaagaggtcaggctgcgcgccagcgtgtctcgcccggttagccatagccgtatgggg
acgcctatcagccaaaacgacagcggctaccgtctcgggcagagagtgagccatcctaag
ttcggcgagggtactatcatcaatctggagggtagcggtgagcatgctcgcctacagata
gcctttcagggggaaggtatcaaatggctagtggcctcctacgcccgtcttgaaacgctt
taa
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