Leminorella richardii: NCTC12151_03596
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Entry
NCTC12151_03596 CDS
T05503
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lri
Leminorella richardii
Pathway
lri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12151_03596 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lri03019
]
NCTC12151_03596 (rhlB)
Enzymes [BR:
lri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12151_03596 (rhlB)
Messenger RNA biogenesis [BR:
lri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12151_03596 (rhlB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CMS1
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
SQI44281
UniProt:
A0A2X4UZP1
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All DBs
Position
1:3833713..3834996
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AA seq
427 aa
AA seq
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MSKTHLTEQKFADFALHPSVIKALESKGFHYCTPIQALALPYTVEGKDVAGQAQTGTGKT
LAFLASTFNYLLTHASDEQRKTNQPRALIMAPTRELAVQISNDAQPLADETGFKTGLAYG
GDGYDKQLKVLQSGVDILIGTTGRLIDYVKQGHVDLSAIQVVVLDEADRMFDLGFIKDIR
WIFRRMPAAEQRLNMLFSATLSFKVRELAFEHMNSPQYIEVEPEQKTGHRIKEELFYPSN
EDKMRLLQTLLEEEWPDRAIVFANTKHVCEEIWGHLAADGHRVGLLTGDVAQKKRLQILD
EFTKGNLDILVATDVAARGLHIPEVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA
CEQYALNLPAIEQYIGHAIPVSRYNPDALMTDLPAPKRLPRTRAVGSQRRSSGPRRSGAP
RGRKRSG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgacggaacagaagttcgccgacttcgcactacacccctcggtc
atcaaagcccttgaaagtaagggttttcattactgtacgccaatacaggcattggcgttg
ccttataccgtagaggggaaggacgttgcaggacaggcgcaaacgggtaccggaaaaacg
ctggcttttctggcatctacctttaactatttattaacgcacgcgtccgacgagcagcgc
aaaacgaatcagccgcgagcgctgattatggcgccgacgcgtgagctggccgttcagatc
agcaacgacgcccagcctctggcagatgaaaccggctttaaaaccggcctagcctatggc
ggagacggttatgacaagcagcttaaagtgctgcagtctggcgtagacattcttatcggt
acaacgggtcgtcttattgactacgtcaaacagggccatgtcgatcttagcgccattcag
gttgtcgttctggacgaagccgaccgcatgtttgacctgggctttattaaggatatccgc
tggatcttccgacgtatgcctgctgcggaacagcgcctgaatatgctgttctcggcaacg
ctctcctttaaagtcagagagctggcgttcgagcacatgaatagccctcagtatattgaa
gttgaaccagagcaaaaaaccggccaccgcattaaagaagagcttttctacccctcaaac
gaggacaaaatgcgccttctgcaaacgctgttggaagaagaatggcccgaccgcgctatc
gttttcgccaataccaagcacgtttgtgaagagatctggggccacttggcggcagatggt
catcgagtcggcctgctgactggcgatgtggcacagaaaaagcgcctgcaaattctggat
gagttcaccaagggcaatctggatattctggtcgccaccgacgttgccgctcgcggtctt
catattcctgaagtcacacacgtattcaactacgacctgccagacgactgtgaagactat
gttcatcgcatcggccgtaccggtcgcgctggcgccagcggcaactcgattagcctggcc
tgcgagcagtacgcgctgaacctacctgctatcgagcagtacatcggtcacgccattccg
gtaagccgctataacccagacgcgctaatgacagacctgcctgcgccgaaacgactgccg
cgcacgcgagctgtaggtagtcaacgacgcagcagcgggccccgtagaagcggagctcct
cgcggtcgcaagcgttcaggatag
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