Lethenteron reissneri (Far Eastern brook lamprey): 133340472
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Entry
133340472 CDS
T09663
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133340472 (KATNB1)
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133340472 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
eIF2A
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WDR54
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_VPS8
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
133340472
NCBI-ProteinID:
XP_061404731
LinkDB
All DBs
Position
9:5429822..5474964
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AA seq
645 aa
AA seq
DB search
MSAAKPTKISWKLQEFVAHGSDVSCLALGRNSGRVMTTGGEDHKVNLWAVGKPNCIMSLS
GHTSPVECVRFKDTEELVLAGSRSGALKIWDLEAAKIVRTLTGHKSSVRSLDFHPYGEYV
ASGSLDTNVKLWDIRRKGCIFTYKGHTDCVNCLRFSPDGRWIASAGEDGTAKLWDLTAGK
LLYEFTDHMAAVSSLEFHPNEFLLVTGSADRTVRFWDLEKFQLVSASEGEACGVRCVLFN
PDGSCLFSGSQDMMRVMGWEPFRCFDSLHVGWGKLADLSILSNQLIGASFQKSTVSVYIV
DLAQVNKSGLGLLAADRPAAPLSPNTTPSRANYVRPHTSSSKQANEMKREPEQEARGANG
DEEEEESSSAEITNPDEYKKIFQPSPMLDRTPPKKAEPFPAPPEEDGLLGKNVLAVVHND
RPLTKAKRQVPSVVVSEDPATNQTEAAVVPGGRKAPLGLRAADFLPNPEREMTEEEVLSQ
VRKGYETLCTLLTDRHKKLKIVLALWTSCEIKTAIDAAISMNDAAVINDVLGIMNSKPSL
WRLDLCPALIPQIEKLLHSKYESYVLTGCVALKIILQNFASVIKGNLTVPPSSVVDITRE
ERYQKCKVCHRLLMNLRPLLDSRKTRSGRVSGAFRELGMLMITFD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggccaagccaaccaagatatcatggaaactgcaggagtttgtggcgcacggg
agcgacgtttcgtgtctggctctcggccgcaactctggccgcgtcatgacaacgggcggt
gaggaccacaaggtgaacctgtgggccgtcggcaagcccaactgcatcatgagcctgtcg
gggcacacgtccccagtagagtgcgtgcggtttaaggacacggaggagctggtactcgcc
gggtcgcggtcgggcgctctcaaaatctgggatctcgaagccgccaagattgtgcggacg
ttgacgggacacaagtccagtgtacggagtctcgactttcacccgtatggggagtacgtc
gcctctggctcactggacaccaatgtcaagctctgggacatcaggcgcaagggatgcata
ttcacctacaagggccacacagactgtgtcaactgcttgcggtttagccctgacgggcgc
tggatcgcatctgctggcgaggatgggacagccaagctttgggacctgactgctggcaag
ctgctgtacgagtttacagatcacatggctgctgtcagctcactggagttccaccccaac
gagttcttgcttgtcacgggcagtgccgacaggacggtgcggttctgggaccttgaaaaa
tttcaattggttagcgcctcagaaggggaagcttgcggtgtcaggtgcgtgctctttaac
ccggacggctcgtgcctattcagcggctcccaagacatgatgcgcgtcatgggatgggag
cccttccgctgcttcgactcgctgcacgtgggctggggcaagctggctgacctttccatc
ctctccaaccagctgatcggcgcctcgtttcaaaaatcgacggtgtccgtgtacatcgtg
gacctggcgcaggtgaacaaaagtggcctgggcctgctcgcggcggacaggccagctgcc
cctctctcgcccaacaccacgccgtcgagagcaaactacgtgcgcccgcacaccagcagc
tccaagcaggccaacgagatgaaaagagaaccagagcaggaggcgcgaggagcaaacggg
gatgaagaggaagaggaatcttcatcagcagaaattaccaaccctgacgagtacaagaag
atcttccagcccagcccaatgttagaccgaacacctcccaaaaaagccgaaccctttcct
gcccctccagaggaagatggacttctcgggaagaacgttctagctgttgttcataatgac
cgaccactgaccaaagccaagagacaggtcccatcggtggtggtcagcgaggatccggca
accaatcagacggaggcagctgtggtacctggaggcaggaaggcccctttgggtttacgg
gcggccgacttcttacccaaccccgagcgggagatgaccgaggaggaagtcctgtcgcag
gtacgcaagggatacgagaccctctgcactctcttgactgatcggcacaagaagctcaag
attgtacttgcgctatggaccagctgtgagataaagacggccatcgatgctgccatctcc
atgaacgacgctgccgtcattaatgacgtcctcggcatcatgaactcaaagccctccctt
tggaggctggacctatgcccagcactcatccctcagatagaaaagctcctgcatagcaaa
tatgagagttacgttctcaccggatgcgtggccctcaagatcatcctgcaaaactttgct
tcggtcatcaagggcaacctgacagtgccgccgtcatccgtggtggacatcacacgtgag
gagagatatcaaaagtgcaaggtgtgccatcggcttctcatgaacctgcgacctctgttg
gacagcagaaagactcgatctggacgtgtgagcggtgccttccgtgaactcggaatgctc
atgatcacgttcgattga
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