Lethenteron reissneri (Far Eastern brook lamprey): 133340503
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Entry
133340503 CDS
T09663
Name
(RefSeq) iroquois-class homeodomain protein irx-5-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133340503
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133340503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SelP_N
Motif
Other DBs
NCBI-GeneID:
133340503
NCBI-ProteinID:
XP_061404792
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Position
9:complement(7657858..7699116)
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AA seq
724 aa
AA seq
DB search
MSYQHAFLYQSPAASLAALYPSGSSSSSSSAAAAAAVAAAAAAAAAAAGGAGPGGGGGAA
AAAGLLIGSAAGGVGSVSAGVGGGGGGPSGMLHAGRGAELGRSGSAFSPYPGLRASLYAG
PFQYAAADGPPYAAYMSSPYDAHPLTYHPYGGASHPSLGPVGYPYGAGGCGVADPAFRKN
ATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKMTW
VTKARSDDELEDDDNDGGGGKELGDSSERSDRDGDLILNVSEPASESQDDRVHGIAVSGD
GGGGTSKCDAVSSRRAGPDCDMSDGDDERLFPTSTTGGIGGATVVLATPPPGSLQPASAP
DRPSLVQHTSAAMNASPSILTTSPVAGTEAPRLGRGSPVLENSSTGQAPANGTFVASQSP
GASRINAGGAGSGGGDRVGAAVTAAAVGSNAGNGNTGGGNGVTPTKPKLWSLAEIAGASD
ERNCSDAQSHGHHHHQHHNHHHHHQQQQQQAAMQAAGIPCMLSAAAAAAAAAAAASPSSS
TQAHAYYACASPAYFSRYGVAGYAANFGGLPGAGGGVVGGGGGGGGTGGGGGGGLRGLPA
PPGNGLVYQTVFKSGHRVPPPAYLFAGYGGGGGVGTGGVGAGGGGAEVRILETQETHDGK
EMIALDCKRVCSAIYPVLGPQGAGAVSEHLLRCTRELVWSAPRPAAFFLHTAPAFDDDDD
ACSV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccagcacgccttcttgtaccagtctcccgccgcatcgctcgctgcgctctac
ccatccggatcgtcgtcgtcgtcgtcttcggcggccgccgcggctgctgttgcagcggcg
gccgcggctgctgcggccgcggctggaggcgcggggccaggggggggaggaggagcggcc
gcggccgcggggctcctgatcggctccgcagccggcggcgtgggatccgtgagcgccgga
gttggtggtggtggtggagggccaagcggaatgcttcacgcgggacgaggagccgaactt
ggacgttcagggtctgcgttcagcccctaccccgggctaagagcctccctctacgcaggc
cccttccagtacgcggccgccgatggtcccccctatgcggcgtacatgagctccccctac
gatgcgcaccccctcacctaccacccctacggcggcgcgagccacccgagcctgggtccg
gtcggatacccatacggggccggaggatgtggcgtggcggacccggcgttccgcaagaac
gccactcgcgacgccacggccacgctcaaggcctggctcaacgagcatcgcaagaacccg
taccccaccaagggggagaagatcatgctggccatcatcacgcgcatgacgctcacccag
gtctccacgtggttcgcaaacgcccgccggaggctcaagaaggagaacaaaatgacgtgg
gtgaccaaggcgcggagcgacgatgagctggaggacgacgacaatgacggcggtggtggc
aaggagctgggcgactcctcggagaggagcgatcgcgacggagatctcatcctcaacgtg
tcggagccggcgtcggagtcccaagatgacagggtccacggcatcgccgtctcgggagac
ggtggcggcggcacctcgaagtgcgacgcggtgtcgtcgcgccgcgccggcccggactgc
gacatgtcagacggggatgacgagcgactcttcccgacctccacgaccggcggcattggt
ggcgccaccgtcgtcctcgcgactcccccgcccggctcgctgcagcccgccagcgctccc
gaccggccctcgctggtgcagcacacatcggccgccatgaacgcgtcgccctcgatactc
accacgtcgcccgtcgccggcacggaggcgccgcggctgggccggggatcgccggtgctg
gagaactcgagcacggggcaggcgccggcaaacgggaccttcgtcgcgtcgcagtcgccc
ggcgcctccaggatcaacgcgggcggtgccggcagtggcggtggcgaccgcgtgggtgct
gcagtcaccgccgccgccgtcggcagcaacgctggcaacggaaacaccggcggaggcaac
ggcgtgacgcccaccaaacccaagctgtggtcgttggctgagattgcgggcgcatcggac
gagaggaactgttcggacgctcagagccacggccaccaccaccaccagcaccacaaccac
caccaccatcaccaacagcagcagcagcaggcggcgatgcaggccgcgggcattccctgc
atgctgagtgcggcggctgcggcggctgcggcagctgcggcggcatcgccctcctcctcc
acgcaggcgcacgcgtactacgcgtgcgcgtcgcccgcatacttctcacgctacggcgtg
gcgggctacgccgccaactttggcggattgccgggagcaggcggcggcgtcgtcggtggt
ggaggaggaggaggcggcaccggtggtggtggcggcggtggtctgcgaggtttgcccgcg
ccgccggggaacggactggtctaccagacggtgttcaagtccggccatcgcgtgccaccg
cctgcatacctcttcgcagggtacggcggcggtggcggagttggcactggtggcgttggc
gctggcggcggtggagcggaggtgaggattttggagacgcaggagacgcacgatggcaag
gagatgatcgcactcgactgcaagcgagtatgttctgcgatatatcctgtcctaggtcca
caaggggcaggcgctgttagcgagcaccttctaaggtgcaccagggagttggtgtggtcg
gcaccacgcccggccgcctttttcttacacaccgcaccagccttcgacgatgacgacgat
gcatgcagtgtatga
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