Lethenteron reissneri (Far Eastern brook lamprey): 133340572
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Entry
133340572 CDS
T09663
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133340572 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133340572 (CSTF3)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
133340572 (CSTF3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
133340572
NCBI-ProteinID:
XP_061404894
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Position
2:8186895..8238399
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AA seq
759 aa
AA seq
DB search
MASEGNAEQVQEYVPEKVKKAERKLEDNPYDIEAWSVLIREAQNQVPDKARRILERLVNQ
FTNSGRYWKTYIEAEIKSKHFDRVEKLFQRCLMKVLHIDLWKCYLTYVRDTKGKLPSFKE
KMAQAYDFALDKIGMDIMSYPIWVDYISFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEHLWRDYNKYEEGINVHLAKKMIDDRSRDYMNARRVAKEYETVTKGLDRNAPSVPPQ
NTPQEAHQVELWKRYIQWEKGNPLRTEDQTLLTKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEHSSKLLAEKGDINNSKLFSDEAAAIYERAISTLLRKNMLLYFAYADFEESRMKYEKVH
SIYSRLAAVEDIDPTLVYIQYMKFARRAEGIKAGRTVFKKAREDIRTRHHVYVAAALMEY
YCSKDKAVAFKIFELGLKKYGDTPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SSEIWARFLSFESSIGDLASILKVEKRRFTAFREEYDGKETALLVDRYQFMDLYPCSSSE
LKALGYKDVTRAKMTSSQPDPVSVPSTAPTSSEEDVTRKPEYPKPNIHQMTPFQPRHMAP
PGLHPVPGGVFPVPPAAVHLMKLCPPPLSFQGPFVHVDKLIDLFREFKLPETVGKAVELI
SQSHASAEAAAATASAAEGNNGSADGGSHRGHDTVRRSGAVKRSAADDSDEEDDKARAGG
GASSSSVSSASSSNAKRAMTSTTPPAHDIYRVRQQKKVR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaaggcaacgcagagcaggtgcaggagtacgttccggagaaagtgaagaaa
gcggagcgaaaacttgaggacaacccgtatgacatcgaagcatggagcgtgctcatccga
gaggcgcagaatcaagttcccgacaaggcccggcgcatcctggagcggctcgttaaccaa
ttcaccaattctggtcgatactggaagacctacatagaggcagagataaaatccaaacac
tttgacagagtagaaaagctgttccagcgatgtctcatgaaggttctgcacatcgatttg
tggaaatgctacctcacctacgtgcgcgacaccaagggaaagctgcccagtttcaaagag
aagatggctcaggcctatgactttgccctggacaagattggaatggacatcatgtcttac
ccaatctgggttgactacatcagcttccttaagggagtggaggcggtgggctcgtacgcg
gagaaccagcgcatcacggccgtgcgcagggtctaccagcgtggatgcgtcaaccccatg
atcaacatcgagcacctgtggcgagactacaacaaatacgaggagggcattaacgtgcac
cttgccaagaagatgatcgacgatcggagccgagattacatgaacgcacgccgtgtcgcc
aaggagtacgagaccgtgaccaaggggctggacaggaacgcgccgtcggtgccgccccag
aacacgccacaggaggcgcaccaggtggagctgtggaagcgctacatccagtgggagaag
ggcaacccgctgcgcaccgaggaccagacgctgctcaccaagcgcgtgatgtttgcatac
gagcagtgcctgctggtgctcggccaccaccccgacatctggtacgaagcggcgcaatac
ctggagcactcaagcaagcttctcgcggagaagggggacatcaacaactcgaaactcttc
agcgacgaggcggccgccatctatgagcgtgccatcagcaccctgctacgcaaaaacatg
ctcctctacttcgcgtacgcagacttcgaagagagccgcatgaaatacgagaaggtgcac
agcatttacagccgcctggctgccgtggaggacatcgaccccacgctggtctacatccag
tacatgaagtttgcgcggcgcgctgaaggcatcaaggcgggccgcaccgtgttcaagaag
gcgcgcgaggacattcgcacgcggcaccacgtctacgtggcggccgccctcatggagtac
tactgcagcaaggacaaggcggtcgcgttcaagattttcgagttgggattgaagaaatat
ggcgacacgcccgagtatatcctcgcgtacattgactacctctcgcatctcaatgaggac
aacaacaccagagtgctgtttgagcgagtgctgacgtctggaagcctaccgcctgaaaaa
tccagcgagatttgggcgcgcttcctgagcttcgagagcagcatcggcgacctggcgagc
atcctcaaggtggagaagcggcgcttcaccgcgttccgcgaggagtacgatggcaaggag
acggcgctgcttgtcgaccgctaccagttcatggacctgtacccctgctcttcgtccgag
ctcaaggctctgggatacaaggacgtaacgcgcgctaagatgacgtcgtcccagccagac
cctgtgtccgtcccgtcgaccgcgccgacctcctcggaggaggacgtaacgaggaagcct
gaataccccaaaccaaacatccaccagatgacgccgtttcagccaagacacatggctcct
cctggcctgcaccctgttccgggaggagtattccccgttcctcccgccgccgtgcacctc
atgaagctttgtccgccccccttaagcttccagggcccgttcgtgcacgtggacaagttg
atcgacctcttcagggaattcaagctcccggagacggtgggaaaggcggtcgagctcatc
tcccagagccacgcgtcggccgaggcggccgcggccacggcgtcggcggccgaggggaac
aacggcagcgccgacggcggctcccaccggggtcacgacaccgtgcgcaggtcgggggcg
gtgaagcgctcggcggcggacgactcggacgaggaggacgacaaggcgagggcgggcgga
ggggcgtcctcgtcctccgtctcttcggcgtcgtcctcgaacgctaaacgggcgatgact
tctaccaccccgcccgcccatgacatttaccgcgtgcggcagcagaagaaagtgcgatag
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