Lethenteron reissneri (Far Eastern brook lamprey): 133340586
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Entry
133340586 CDS
T09663
Name
(RefSeq) transcription factor SOX-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133340586
Transcription factors [BR:
lrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133340586
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Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
KOKOPELLI
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133340586
NCBI-ProteinID:
XP_061404919
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Position
10:complement(11681039..11689008)
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AA seq
574 aa
AA seq
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MSDINHEMSRTPSPHCSSDAGSGLGSPGRSDPEPSSVEHGGGGGGGGGGGGSGGCSSSGS
EPSRGGGTDDPFSESIQAAVSQVLDGYDWSLLPVPVRGAGGPGGCKPGEKPHVKRPMNAF
MVWAQAARRKLSDQYPQLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRMQHKKDHPDY
KYQPRRRKQQGKGDGADTNSSEPGPPQLQARALGGAYVHLSGPGDAALLDVHGPHHGHVA
GQPQSPPTPPNTPKTADHGPAGKGQGKRGHAGGAAATGEGPRHPSLDFQTIGMGDIAAEA
ISGMGNFDVNEFDQYLPPSGHSSVIATNSAAAFAAGGFGGAVGGGPNASSAAASSAAAAA
ATAATAASSLGQVAAWAPAKSPVSGGDRERDGRERARGGGGGGGVKTEQQQQQSVSPIRY
SAHYQPQQQQQQQQQQQQQVGFGFQSHHPHHHHHQQHHHHQQQQHQQQQQQAYAELQGVQ
PPRGSQLPDLVAAVAAASAAHAEHHHHHHHLSGGPPSFYGQGLYPAAFPHYLHGAAQRPL
YPPVPEATSPSPAQSHSPPQHWDSTPVYTQLSRP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatatcaatcacgagatgtcgcgcactccgagcccgcactgctcctcggacgcc
gggtctggactcggatcccctggccgcagcgatcccgagccgagctccgtcgagcacgga
ggaggcggcggcggcggcggaggaggaggaggctcgggtggctgcagctcatcgggctcg
gagccgtcgaggggaggaggcaccgacgaccccttctcggagagcatccaggcggccgtg
agtcaagtgctggacggctacgactggtcgctgttgcccgtgcccgtgcgtggagccggt
gggccggggggatgcaagccgggcgagaagccccacgtgaagagacccatgaacgcgttc
atggtgtgggcgcaagcggctcgcaggaagctgtccgaccaatacccgcagctccacaac
gccgagctcagcaagacccttggcaagctgtggaggctcctgaacgagggcgagaagcgg
ccgttcgtggaggaggcggaacgcctgcgcatgcagcacaagaaggaccaccccgattac
aagtaccagccgcggaggcggaagcagcagggcaagggtgacggtgccgacacgaacagc
tccgagccgggcccccctcagctgcaagcgcgtgccctggggggcgcctacgtgcatctg
tctggcccgggagacgcggcccttctcgacgtgcacggcccccatcacggacacgtggca
ggtcaaccccagagccccccgacaccacccaacacgcccaagacggccgaccacggcccc
gcgggcaagggccagggcaagcgaggacacgcggggggcgccgcggcgacgggcgagggg
ccccggcacccgagcctcgacttccagaccatcggcatgggtgacatcgcggccgaggcc
atctcgggcatgggcaacttcgacgtgaacgagttcgaccagtacctgccccccagcggg
cactcgtccgtcatcgccaccaactcggccgccgcgttcgccgcgggcggcttcggtggc
gccgtcggcgggggtcccaacgcctcctccgccgccgcctcctccgccgccgccgccgca
gccaccgcggccaccgcggcgtcctcgctggggcaggtggccgcgtgggctccggccaag
agccccgtgagcggcggagaccgagagcgagacggcagggagagggcgaggggcggcggt
ggcggcggtggcgtgaaaacggagcagcagcagcagcagagcgtgagcccgatccgctac
tcggcacactaccaaccccagcagcagcagcaacagcagcagcagcagcaacaacaggtc
ggcttcggcttccaaagccaccacccgcaccaccaccaccaccagcagcaccaccaccac
cagcaacagcagcatcaacagcagcagcagcaggcctacgccgagctgcagggcgtccaa
cctccccggggctcgcagctgccagacctcgtggccgcggtggcggccgcgtcggccgcg
cacgcagagcaccaccatcaccaccatcacctgtcgggggggcctccctccttctacggg
cagggtttgtaccccgcggcgttcccgcactacctgcacggggcggctcagaggcccctc
tacccgcccgtgcccgaggcgacaagcccatcgcccgcgcagtcacacagcccgccccaa
cactgggactcgacgcccgtgtacacgcagctcagccgcccgtga
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