Lethenteron reissneri (Far Eastern brook lamprey): 133340691
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Entry
133340691 CDS
T09663
Symbol
TRIP12
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133340691 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133340691 (TRIP12)
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133340691 (TRIP12)
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
HECT type E3
133340691 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
Proteasom_PSMB
ARM_ARMC5
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
133340691
NCBI-ProteinID:
XP_061405069
LinkDB
All DBs
Position
2:complement(13364427..13411244)
Genome browser
AA seq
2301 aa
AA seq
DB search
MSDQPNHHPGGSTLRRTTRSNAGVRASHTDASTHWSRGEAPKRRASRSPVARHTKPRTSA
KGGTSAAWNAPGASATSSSSSASSSSSSSLAAAPGEGERGGREASAADGVASQAGDSKAA
AAPVAAAATRKGNQDKGGGSRGGQRGQGGAGRGRGRGANQGQSQSKGPKRPGVEEPKVRT
SRPKKRKEEERVEGSKTVSRVGSSKLASRPRPAQQQQQEAAAAVTKPVTESAASAPSSST
PGAAQGAALKQTKEHQAKGRGSSRTTSSHRRAKPGAAPHLVAASSSSAPTPPPPSSLLTS
SAAAAAAAATAPIATEPLTHGNAKATDVTASATSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSAVSPRVSPSANLLKLRLSSAQGPPPPPGQPPSSSSSSSTAIATATTAAATSSPTATVA
AAASSSSAAASSSSSSLGAAPQGLAVASSSTSAAAAAAAFALSLSAPPGVSVATGARETR
AGPSGLQAKLASLRKGSSKKRSESPPLELPGLRRSTRLKTTGSCASTSRRGSGLGKRGGG
VAESRRQDKMADSDGNQEGGGGGGGGGGGGGGGGGSAGPGGARPLDDAPQGAAASGSSLG
AVGVATSGESESEDSDMGRLQALLEARGLPPHLFGSLGPRMQQLFHRTIGTGTSSKAQQL
LQGLQSTGDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALISLLQMEHNFDMMNHA
CRALTYMMEALPRSSAVVVEAVPALVEKLQVIQCMDVAEQALTALEMLSRRHSKAVLQAG
GLAASLLYLEFFSISAHRNALAIAANCCQSVTTDDFHLVSDSLPLLSARLSHQDKKSVES
ACLCFTRLVDNFQHDEALLQQVAAHELLTNVQQLLVMSPPVLSSGMFIMVVRMLAVVCGH
CPQLAARLMRQNIAETLSFLLCGTSDSSNQETIELVARSPQELYELTSLICELMPCLPRD
GIFGVDAMLKKGGAHTPDASSWQWRDDRGAWHAYSHIDCRIIEAAHVSGEDEISLSTLGR
VYTIDFNSMQQINEDTGTARPIQRKPNPLAPGATRLSAAGGLEPRPADDARTALMRTEPA
LAKNFVRTLFGVLYEAYSSSAGPAVRHKCLRAILRIVYFAEAELLVDVLKNQAVSSHIAS
MLSSQDLKVVVGALQMAEILMQKLPDIFHIYFRREGVMHQVKTLSESDSALASPQKDAGN
LAIGVGLGLGAPHASAVGGGHTPSPISACASAGTPSPSSDTHTPSFHTTSTDDSLDYATQ
GRLSDVLKRKRLPKRTTRRTKYSPTREEGQRDASAKSPTASTSPKSFFGSLNPSRWGRSA
GHAAQSSASSSSSSSHTHPVPSSSSTSSSSSHLLHGVAAPTPAGLGVANQGGGAGGVGAE
GLRLQGIVRGGAHREAAHTNRDKIRAWIKEQAGRFLQRYFSSDPPSDSATPALGVLQRLC
HAAHNLNSQPDGGLHCLQEMRCIVLDSDVSSFEIQHSGTVSKLLHYLSGPGECRHARSRR
FLHVFMGCPPPEEGPGRGVDPPDTAPLLALVQKMNLCLSQLEQFPVKVHDLPSGNGTGSR
GSQALKFFNTHQLKCQLIRHPDCSTVKQWKGGAVKIDPLALVQAIERYLVVRGYGRIRDE
DDDSDEDASDDEVDESLAAQFLSAGSVRHRLVFYMGEHPLPYNMTVYQAIRQFGLPSEEE
RESTDEESNPLGRAGIWIKTHTIWYKPVCDDDEVRVEVCGSGGKRGRAQTAPAKPSPKAS
KKHDSLWHDGVCPPASSPLDAYLCARPPHALTLDDPSLEVILLIRLLHALNRYWFHLYED
AACTEAIPSSEFINSKLTAKANRQLQDPLVIMTGNIPAWLTELGKTCPFLFPFDTRQLLL
YVTAFDRDRAMQRLLDTNPDISQADAQDSRVAPRLDRKKRTVNREDLLKQAESVMSELGS
SRAMLEIQYDNEVGTGLGPTLEFYALVSQELQRADLGMWRGDELTITSPKGASEGVRYVH
SAQGFFPAPLGRNTKATVLTRLKIKFRFLGRFMAKALMDSRMLDLPLSLPFCKWMLGGEG
SLTEGDLVHIDPVVHRSVLQLRSVLWEKQKLEQDRTQTRESLQSALEALTMSGCSIEDLS
LDFTLPGFPHIELRRGGKDVPVTIHNLQQYLQLVVHWTLVEGVSRQFEAFREGFESVFPL
HHLHYFYPEELDQLFCGSKAEIWDVKSLMECCRPDHGYTHDSRAVKFLFEILSSFDSEQQ
RLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTLEAAEDPDGFLPSVMTCVNYLKLPDYSTC
SLMRERLLTAAREGQRSFHLS
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagcctaaccaccatccaggggggtccacgctacgccgcacgacacgcagc
aacgccggggtgcgggcttcccacacggacgcaagtacccactggtcgaggggggaggct
cctaagcgcagagcttcgcggtcgcccgtcgcgcgacacaccaagccacggacgtccgcc
aagggtgggacgagcgcggcttggaacgcccccggagcgtcagcgacctcgtcctcctcc
tctgcgtcgtcgtcgtcatcgtcatcattggcggcagcgcctggcgaaggagaaagagga
ggaagagaggcgtcagcggctgacggagtcgccagccaggccggcgattcgaaggcggcg
gcggcgccggtggcggcggcggcgaccaggaagggcaaccaggacaagggagggggcagc
cggggagggcagcgggggcagggaggggcggggcgggggagagggcggggagccaatcaa
gggcagtcgcaaagcaagggccctaagaggcccggagttgaggagccgaaggtcaggaca
agtcgtccgaagaagaggaaggaagaggagcgagtggaggggagcaaaaccgttagccga
gtgggaagctccaagctggcgtcgcggcccaggccagctcagcagcagcagcaggaggca
gcagcagcagtgacaaaacccgtgacggagtctgcggccagcgcgccctcctcctccacg
cccggggcagcccagggagccgcactcaagcagaccaaggagcaccaggccaaaggtcgc
gggtcctcccgcacgacctccagccaccgtcgggccaagcccggcgctgccccccatctc
gtcgcagcctcctcgtcctcggcaccgacaccaccgccgccgtcgtcactgcttacatcg
tccgcagcggcagcggcagcagcagcgaccgctccaatcgccacggagccgttgactcac
ggcaacgccaaggcgacggacgtgacggcctcggccacctcgtcgtcatcgtcgtcgtcc
tcctcctcctcgtcgtcctcgtcctcgtcgtcctcttcgtcgtcgtcttcgtcgtcgtca
tcgtcagccgtgtcccccagggtcagccccagcgccaacttgctgaagctgcggctgagc
tcggctcagggacctccgccgcctcctgggcagcctccctcctcctcgtcgtcgtcgtca
acggcgatagccaccgccaccactgccgccgccacctcctcacccaccgcgactgtcgca
gcagcagcgtcgtcgtcttcagcggcggcatcgtcgtcgtcgtcatcgctgggcgccgcc
ccacaggggctggctgttgcgtcgtcatcgacgtcggcagccgctgctgccgcggcgttt
gcactctcgctgtcggcgccacccggcgtttccgtggcgacgggcgccagggagacgagg
gccggaccctccgggctgcaggcgaagctcgccagtctgcgtaagggcagcagtaagaag
aggagcgagtcccctccattggagctccccgggctacggaggagcactcgcctcaaaacc
acgggctcgtgtgctagcactagccgccgcggctctggactgggcaagcgcgggggaggg
gtggcagaatcgcgcagacaggacaagatggccgacagcgatgggaaccaggaaggtgga
ggtggcggaggcggcggcggcggaggaggaggaggcggtggaggcagcgcagggcccgga
ggggctcggcccctggacgatgccccccagggagccgccgcctccggatccagtctgggc
gctgtgggcgtggccacgtccggggagagcgaatcggaggactcggacatgggacgacta
caagctctgctggaggcccgggggctgccccctcacctttttggctccctgggtccgagg
atgcagcagctgttccaccgaaccatcggcacgggcaccagctccaaggcgcagcagcta
ctgcaggggctgcagtcgacgggtgacgagtcccagcagctgcaggccgtcatcgagatg
tgccagctcctcgtcatgggcaacgaggagacgctgggtggcttccccgtcaagagcgtc
gttcccgcgctgatcagcctgctgcagatggagcacaactttgacatgatgaaccacgcg
tgccgtgccctcacgtacatgatggaggctctgccgcgctcgtcggcagtggtggtggag
gccgtgcccgcactggtggagaagctgcaggtgatccagtgcatggacgtggctgaacag
gcgctcaccgccctcgagatgctgtcacggagacacagcaaggccgtgctgcaggctggc
ggcctggcagcgagcctgctctacctggagttcttcagcatcagcgctcaccgcaacgcg
ctcgccatcgccgccaactgctgccagagcgtcaccacggacgacttccacctcgtctcc
gactccctgccccttctctccgctcgcctctcccaccaggataagaagtctgtggaaagc
gcttgcctctgcttcacccgcctcgtcgacaacttccagcacgacgaggccctgttgcag
caggtggccgcgcacgagctgctgacgaatgtgcagcagctgctggtgatgtcgccgccg
gtgctgagctcggggatgttcatcatggtggtgcgcatgctcgccgtcgtgtgcggccac
tgcccgcagctcgcagcgcggctcatgcgccagaacatcgctgagactctgagcttcctg
ctgtgtgggacgtcggacagcagcaaccaggagacgatcgagctggtggctcgcagcccc
caggagctctatgagctcacctcgctcatctgcgagctgatgccatgcttgccgcgggac
ggtatcttcggcgtggacgcgatgctgaagaagggcggggcgcacacgccggacgcgtcc
tcctggcagtggagggacgaccgcggcgcgtggcacgcctactcgcacatcgactgccgc
atcatcgaggctgcccacgtgtcgggcgaggacgagatcagcctgtccacgctcggccgc
gtctacaccatcgacttcaactccatgcaacaaatcaacgaggacaccggcaccgcacgt
cccattcagcgcaagcccaaccccctcgcgcccggcgcgacgcggctgagtgcggcgggc
ggcttggagccgcgtcccgcggacgatgcgcgcacggcactcatgcgcacggagccggcg
ctcgccaagaactttgtgcgcacgctgttcggggtcctgtacgaggcctacagctcgtcg
gccggtcccgccgtgcgccacaagtgcctgcgcgccatcctccgcatcgtctacttcgcg
gaggcggagctcctcgttgacgtgctcaagaaccaggccgtgtccagccacatcgcgtcg
atgctgtcgagccaggacctgaaggtggtggtgggcgcgctgcagatggccgagatcctc
atgcagaagctgccggacattttccacatttacttcaggagggaaggtgtgatgcaccag
gtgaagacgctgtccgagtcggactcggcgctggccagcccgcagaaggacgcggggaac
ctggcgatcggcgtggggctggggctgggggccccccacgcctcggcggttggtgggggg
cacaccccctcccccatctcggcgtgcgcctcggccggcacgccgagcccgtcgtccgac
acgcacacgcccagcttccacacgaccagcaccgacgactcgctcgactacgccacgcag
ggacggctgagtgacgtgctgaagcgcaagcgtctgcccaagagaacgacgcggagaacc
aagtactcgcccacgcgggaggagggacagagggatgcctctgctaagagcccgacggct
tcgacctctcccaagtcgttcttcgggagcctcaacccgagccgctggggtcgatcggcg
ggccacgctgcccagtcctcggcctcctcctcgtcctcctcgtcgcacactcaccccgtg
ccctcgtcctcctccacctcgtcctcctcctcgcacctcctccacggggtggctgccccc
acccctgcggggctgggggtcgccaaccaggggggcggggccgggggagtgggcgcggag
gggctgaggctgcaggggatcgtgcggggaggggcgcaccgggaggcggcgcacacgaac
cgggataagatccgcgcgtggataaaggagcaggccggccgcttcctgcagcgctacttc
agctccgacccacccagcgacagcgccactccggccctcggggtgctgcagcgcctgtgc
cacgcggcacacaacctcaactcgcagccggacgggggcctgcactgcctgcaagagatg
cgctgcatcgtgctcgactcggacgtgtcgtcgtttgagatccagcacagcggcaccgtc
tccaagctgctgcactacctgagtgggcccggcgaatgccgccacgcccgcagccgccgc
tttctgcacgtcttcatgggctgcccgccccccgaggaggggccaggccggggcgtggat
cctcccgacacggccccgctgctcgcgctcgtgcagaagatgaacctgtgcctctcgcag
ctggagcagttcccggtcaaggttcacgacctccccagcggcaacggcacaggcagcagg
gggtcacaagcgctcaagttttttaacacgcaccagctcaagtgtcagctgatccgacac
ccggactgctccactgtgaagcagtggaaggggggggctgtgaagatcgaccccctcgcg
ttggttcaggccatcgagagatacctcgtggtcagagggtacgggcgcattcgcgacgag
gacgacgacagcgacgaggacgcgtcggacgacgaggtggacgagtctctggcggcccag
ttcctgagcgctggcagcgtgcggcaccggctggtgttctacatgggcgagcacccgttg
ccgtacaacatgaccgtgtaccaggcgatccgccagttcgggctgcccagcgaagaggag
cgcgagagcactgacgaggagagcaaccccctgggacgcgccggcatctggatcaagact
cacaccatctggtacaagccggtgtgcgacgacgacgaggtgagggtggaggtgtgcggc
agtggcgggaagaggggacgggcacagacggcgccagccaagccctcgcccaaggccagc
aagaagcacgactccctgtggcacgatggcgtctgccccccagcgagcagccccctggac
gcgtacctgtgcgcccgccccccacacgcgctcaccctcgacgacccctcccttgaggtc
atcctgctcatccgcctcctgcacgcgctcaaccgatactggttccacctttacgaggat
gcggcatgcacagaagccatccccagcagcgagttcattaacagcaagctgacggccaag
gcgaaccggcagctacaggacccgctcgtcatcatgaccggcaacatccctgcctggctc
acggagctcggaaagacctgcccgttcctgttcccgtttgatacgcgccagctgctgctc
tacgtgacggcgtttgaccgcgaccgcgccatgcagcgcctgctcgacaccaaccccgac
atcagccaggccgacgcgcaagacagccgcgtggcaccacgcctcgaccgcaagaagcgc
acggtaaacagggaggacctcctgaagcaggcggagagcgtcatgtcggagctgggcagc
tcacgagccatgctcgagattcagtacgacaacgaggtgggcacggggctgggcccgacg
ctggagttctacgcactcgtgtcgcaggagctgcagcgcgccgacctgggcatgtggcgt
ggagacgagctcaccatcaccagccccaagggcgcgtcggagggcgtgcgctacgtgcac
agcgcccagggcttcttcccggcgccgctggggagaaacacgaaggcgacggtgctgacg
cgactcaagatcaagttccgcttcctcggccgcttcatggccaaggccctgatggactcg
cgcatgctggacctgccgctgagcctgcccttctgcaagtggatgctgggcggcgagggc
tcgctcaccgagggcgacctggtgcacatcgaccccgtggtgcaccgctccgtgctgcag
ctgcgctccgtgctctgggagaagcagaagctggagcaggatcgcacgcagacgcgcgag
tcgctgcagtcggcgctggaggcgctcaccatgagcggctgctccatcgaggacctgagt
ctggacttcacgctgcccgggttcccgcatattgagctgcggcgcgggggcaaggacgtc
cccgtcaccatccacaacttgcagcagtacctacagttggtggtgcactggacgctggtg
gagggcgtgagccggcagtttgaggccttcagggaaggctttgagtccgtgtttcccctg
caccacctccactacttctacccggaggagctggatcagctgttctgcggtagcaaggcg
gagatctgggatgtgaagtcattgatggaatgctgccggccagaccacggatacacccac
gacagccgagcggttaagtttttgtttgagattttaagttccttcgactcggagcaacag
aggctgttcctgcagtttgtgacggggtctccccgcctgcccgtcggaggcttccggagc
ctgaacccgccgctgacgatcgtgcgcaagacgctggaggcggcggaggacccggacggc
ttcctgccgtccgtcatgacgtgcgtcaactacctgaagctccccgactactccacgtgc
tcgctcatgcgggagaggctgctgactgcggcgcgcgagggccagcgctccttccacctc
tcctag
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integrated database retrieval system
