Lethenteron reissneri (Far Eastern brook lamprey): 133340718
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Entry
133340718 CDS
T09663
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
lrj04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133340718
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133340718
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133340718
03036 Chromosome and associated proteins [BR:
lrj03036
]
133340718
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133340718
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133340718
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133340718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
133340718
NCBI-ProteinID:
XP_061405096
LinkDB
All DBs
Position
2:13455710..13499826
Genome browser
AA seq
1344 aa
AA seq
DB search
MEDWRQQQLLLSQSLSTSSSLSSLSSLSLSSSSSSSLRPGPPAAYKLVATSVTHFGSARA
EACLPSITTPLSRAVHHCVATDNAAKTASTAKTTGKWEGSHGCSLKTTEAQRAGGILKAT
SQGGHFQDVVGETGGAFPVLAPHCDELQNGCFREGVTPGWCGVASCRVVHRGTCSPATPR
IVHSSPVKATAFAMGGGRCSNDDGLTHLFIGSSGDSSDCGSTAPKNNVVLARKSLARPNV
AVGTIELASGKIKEFSRQTQQAQANAARRSPRRNKGASDAKAPATVKHASRMKPMSDPET
SLCVARPSGRAGPDAAFDLLLPYLRQGLLVRLLEEAGASTGGDNTGSVEQFLSSLFASTT
SAPSTAAFSSTEDIRACLQILVKCSEDLKRCTNIIKQCVDEKSQRDGKAVRAGCGSSTPD
LHRALPDTAGPEFLAAFLGGAVAAAAAAGFGSIAPPSYEDVVSSSSHPGRPATPLPPNEM
PLRRSLELKSSSSSHPTSKFTGRKPSNKTSSLFSLAPSPNSVAIVPPSQDTGADLLLLPT
QATSENCASRSVDGGVADNGKLPHMLINSTNMAADFPQLLPAVESEGSIGEKREYDVDQI
LVELENISKEFSSPSPVKSNAKLDPAKGAKANDRNDNDEDEDKLLGKVLAVMEGLATDLA
QCGATGSGARLSGEAQVRAKQDLMGLLMERLTTALQGPESGPTALAVPQERHAHQAAGAD
AAEAATHLETREESKPEPVLHNHLPHAPDPDPHPPSSRIHSLSSFRSPGESVPHTPVSST
RKSPAPALRGWNSRGPTPQSVLISEPAPPPPSPPPPPAAVVQNSPDPDLQIPIAFAQVPK
PASPGREGVEKQGGAAGAVVVISSTVPPAPDSNSLRPGYETRNLESGVSLHDAESAVGFH
ASLLSSDDDVGKGERFGKGGGGGASSDEDLSGVMIALKEVFGALPGGRAYLENMTDVTKA
CRCCPYWRVALFLAAHGEETGFVTMETFTLTWLRVTQASEDDAARFVSLLARPGMAGLTQ
EDFIPLVQDIVDTHPGLAFLKEAPEFHSRYITTVIQRIFYTVNRSWSGRITVNELRRSNF
LQTLALVAEEDDINQVTEYFSYEHFYVIYCKFWELDTDHDLYISASDLARHSDGAISSCM
IHRIFSGAVTRGSMAQQAGRMSYADFVWFLLSEEDKRTPTSIEYWFRCLDLDGDGVLSLY
ELEHFYSEQAQRMEVLGIEPLPFCDCVCQMLDLVKPVRPACVTLGDLKRCKMSHIFLDTF
FNLEKYLDREQREPFAITRDLDGDAPELSDWERYAMEEYEMLVAKESEADQLTKGTSDED
IDDEDDILAAAELAGEISGLGTQS
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggaagactggcggcaacagcagctgttgctctctcagtcactctccacctcatcatcc
ctctcatctctgtcatccctgtcattgtcgtcatcttcgtcgtcgtcccttcgccccggc
cctccggccgcctataagctcgtggcgacgagcgtgacccatttcggcagcgctcgcgcc
gaggcctgcctgcccagcatcaccacgccgctgagccgtgccgtgcaccattgcgtggcc
accgacaacgccgccaaaaccgccagcaccgcaaaaaccaccggcaagtgggagggcagt
catggctgcagtctcaaaaccactgaggctcagagggctggcggcatcctcaaggccacc
agtcaaggtggccactttcaagacgttgttggtgaaactggaggtgcttttccagttttg
gcaccccactgtgatgagctacaaaatggctgctttcgagagggtgtcacgccgggctgg
tgcggcgtggcttcgtgccgggtggtgcaccgtggcacgtgctcccctgcaaccccacga
atcgtgcatagctcacctgtgaaggcgaccgccttcgccatgggtgggggtcgatgctcg
aacgacgatggcctcactcatttattcatcggcagcagcggcgactcctccgattgcggt
tccacggctcccaagaataacgtggtccttgcccggaagagcctcgccaggcctaacgtc
gctgtgggaacaatagaactggcgagcggaaaaatcaaagagttttcccgacaaacgcag
caagcgcaggcgaacgcggcgcgcaggagcccccggcggaataaaggagcctccgacgcc
aaggcccctgcgacagtgaaacacgcgtcgaggatgaaaccaatgtcagatccagagaca
tcactgtgcgtggcccgaccgagcggcagggcaggtcctgatgcggccttcgacctgctc
ttgccatatctgcgccagggcctcctcgtcaggctcctggaggaagccggcgcctccacg
ggcggagataacaccgggagtgtcgagcagtttctgtcgtcgttgttcgcatcgacgaca
tcggcgccttcgacggccgctttctcgtccacagaggacatccgagcctgcctgcagatc
ctggtgaagtgctcggaagacctgaagcggtgcaccaacattatcaagcagtgtgtcgac
gagaagtctcagcgcgacggcaaggcggtgcgtgccggttgcgggtcgtctactcctgac
ctccaccgggccctgcccgacacggccgggcctgaatttctcgcggcattccttgggggt
gccgtcgccgcggcagccgcagcaggatttggttctattgcccccccgtcctacgaagac
gttgtctcctcctcgtcccacccaggccgccctgctacacctctgccaccaaacgaaatg
ccattacgacggtcgctggagttgaaatcgtcatcgtcttcgcatccgacatcaaaattc
acaggaaggaaaccgtcgaacaaaacatcatctttgttctcactagctcctagtccgaat
tctgtggcaattgttccaccatcgcaggatacaggtgctgacttgctgttgctaccaaca
caggcgaccagtgagaattgtgcttccagaagtgttgatggtggtgtcgcagataacggg
aagctgcctcacatgttgatcaactccaccaacatggcggcagattttccacagcttctt
ccggccgtggaaagtgaaggaagtatcggggaaaagcgtgagtatgatgtggatcagatt
ctggtggagttggaaaacatttccaaggaattttcgtcaccatctcctgtgaagtcgaat
gctaaattggatccggcaaaaggcgcgaaggcaaacgaccgaaacgataacgacgaggat
gaagataaactgctggggaaggtgctggcagtgatggagggcctggccacggacctggcg
cagtgcggcgccaccggctcgggcgcccgtctgtcgggcgaggcacaggtgcgggccaag
caggacctcatggggcttctcatggagagacttacgacggcgctgcagggtcccgagtca
ggccccacggccctggcagttcctcaggagcggcacgcccaccaggcagctggcgcagat
gcggcggaggcggcgacgcatttggaaacccgagaggagtcaaaacccgaaccggtcctg
cacaatcacctcccgcatgctccggatcctgacccacaccctccgagctcccggattcac
agcctcagctctttcagaagccctggggaatccgttcctcacactccagtctcctcgacg
cgcaagtccccagctccagcgctgcgaggatggaactcgcgggggccgacgccacagagc
gtcctcatctccgaaccagcgccacctccgccgtcgccaccaccaccaccagctgcggtg
gttcaaaacagcccggatccagatttgcaaattccgatcgcctttgcacaagtccccaag
ccggcgagtccaggccgggagggagtggagaagcaggggggtgctgccggcgccgttgtt
gtgatctcatccactgtgcctcctgcaccggattcaaacagtctccgtcccggttacgaa
acccggaatctggaatctggagtttcgcttcatgatgcggagtccgctgtgggttttcac
gcgagcttgctatccagtgacgatgatgtcggcaaaggcgaaagatttggcaaaggaggt
ggcggtggagctagcagtgatgaggatctgagtggggtgatgattgctttgaaggaggtc
ttcggagccctgcctggtgggagagcctatctggaaaacatgacggatgtcacaaaggcg
tgcaggtgctgcccctactggagagttgccctcttcctcgctgcccatggggaggagact
ggattcgttaccatggaaaccttcaccctgacctggttacgggtgacgcaagcgagtgag
gatgacgcggcgaggttcgtgtcgctcctggctcggcccgggatggctggactcacccag
gaagacttcatcccccttgtgcaggacattgtggacactcatccagggctggcgtttcta
aaagaagctccagagtttcactcgcgttatataactacggttatccaaagaatattttac
acagtcaaccgatcgtggagtggacgaattacagttaacgagctcaggagaagtaacttc
cttcaaacgctggcgctggtggcggaagaagacgacatcaaccaggtgacagagtacttc
tcgtacgagcacttctacgtcatctactgcaagttctgggagctggacaccgaccacgac
ctctacatcagtgccagcgacctggcgcggcatagcgacggagctatttcgagttgcatg
attcacaggatcttctctggggcggttacacgaggctccatggcgcagcaggccggacgc
atgagctatgctgatttcgtgtggttcctgttgtcggaggaggacaaacggacacccacc
agcatcgagtactggtttcggtgcctggacctggatggggacggcgtgctgtctctctac
gagctcgagcacttctacagtgagcaggcgcagcgcatggaggtgctgggcatcgagccg
ctgcccttctgcgactgcgtctgccagatgctcgacctcgtcaaacctgttcggccagcg
tgcgtgacgttgggagacctcaaacgttgtaaaatgtcgcacattttcctggatacattc
ttcaacctggagaaatacctcgaccgcgagcagagggagccgttcgccatcacccgggat
ttggatggagacgcacccgaactgtccgactgggagcgttacgccatggaggagtacgag
atgctggttgccaaagagtccgaggcggatcagctcaccaaggggacgtccgacgaagac
atcgacgatgaagacgacatcctggcggccgcggaactcgccggcgaaattagcggcctc
ggcacacagagctga
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integrated database retrieval system
