Lethenteron reissneri (Far Eastern brook lamprey): 133340743
Help
Entry
133340743 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133340743
04020 Calcium signaling pathway
133340743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133340743
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133340743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133340743
NCBI-ProteinID:
XP_061405117
LinkDB
All DBs
Position
10:complement(14383437..14436124)
Genome browser
AA seq
2200 aa
AA seq
DB search
MSADAGPGAVMAEEAATSEQVPGPEGPQEEDVPGDAAGSSPLPYPGLAPVAFFCMRQTSG
PRRWCLRLVCDPWFERASMLVILLNCATLGMFQPCAEGQCRAQRCSVLQAFDDFIFTFFA
VEMILKMMALGIWGRAGYLGDTWNRLDFFIVLAGMLEYSLDMESVSLSAIRTIRVLRPLR
AINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLREANAT
LDVDGSSLPLSPVFRTEDESDRPFICSLPRDNGVRSCRDLPRSRLAGGPCASGAALGGRG
GAAGRRATVRAPRAPTAHTAHTAHTVTTAPTVRTEALARKPWCPFLRTRAAAGRAVCVDW
SRYYSECRPGKRNPHGGSVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFI
LLIIVGSFFMINLCLVVIATQFSETKQRENQLMHEQRARLGSRGSSIDSAGGDQEPGSCY
QELLRYSARACRRLRRRALHLWGACSSACSSARNSASSSQPRSAMRGSCLERGGCLHVAK
RRPRCSCRRHRSSSLLRHHYQQQSHRRRHVSHHHHHHRHHHHHHHNHHHRRDGGAARGTL
AGGGGSRRRRTCKSVHRHMVHHHHHHHHHYHIGNGSGQQQQQQQSAAAAAPGIPQLEAGE
AGAPLGPGGSSGALVVRGRGGRTASVHSVFHADCVRLDCPPTGVKQPLSPPTPRVTPPIS
YPTIIASGPPRNEDAAKAKAAPGRGGSIAPYRGLRRFSRTYSSSRRDSGRSSRGSPSLLL
ERELQRCPHCPSDSSDCDCSDSDSGSDAGSGLGAEGPPHPRDPRDPRDPRDLRRPSGRRD
QDRPEEGPPRRVARLPARARRWGAARPRWARAWGTAGPRWARVSRWFRAIVESKYFTRGI
MVAILINSLSMGIEYHEQPEELTNLLEISNMVFTSIFALEMLIKLLASGLLGYIRNQYNI
FDGIIVIISVCEIVGQSGGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMRTMDNVATFC
MLLMLFIFIFSILGMHLFGCKFSVKTESGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVV
LYHGMASSSPWAALYFIALMTFGNYVLFNLLVAILVEGFQAEGDASRSDSDDDVGGSALD
EEGDSAKGLPVLASNGHADPKGVGGPAPTDAASSPVGEPWHHVVLDASACIVGEGISGGP
GVLVGAAVLVAGPGPRAARRSSGSRGGAGSPRRQGERRSLLSPDDGDDHEFIDAPGAASG
GDEGAGAREGAREEAPAAPGAAPGAAPPVAPHDVAAVRVALHRPALPLPLLMPVALHLSL
PDCNGKTPPHGSAKHAPPDPLDDIDDRWWFRLGRRLQRHRPRCCVVRADWSLYVFHPHNR
FRWVCRKIIAHKVFDHVVLLFIFLNCITIALERPDIPSYSAERVFLTVSNYIFTAAFVTE
MAIKVTALGLALGDGAYLRSSWNLLDGLLVLVSAVDIVVSLASSGGARILGILRVLRLLR
TLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYFCEGT
DTRNITSRADCARAHYRWVRRKYNFDNLGQALMSLFVLASKDGWVNIMYDGLDAVGENLQ
PVRNHNPWMLLYFISFLLLVSFFVLNMFVGVVVENFHKCRQHQEAEETRLREEKRLRRAE
KRRRNGKDAGGRRAKQGAHKNHKEAQQKPYYADYSRTRMLVHGACTSSYLDLFITVVIGL
NVVTMAMEHYDQPRSLEEALKYCNYFFTTVFVLEAAFKLVAFGIRRYFKDRWNQLDLGIV
LLSIMGITLEEIEMNASLPINPTIMRIMRVLRIARVLKLLKTATGMRSLIDTVVQALPQV
GNLGLLFLLLFFIYAALGVELFGRLICDDETPCEGLTRHATFENFGMAFLTLFRVSTGDN
WNGIMKDTLRECGAGLPAEPPGCVAHLPLISPVYFVTFVLTAQFVLVNVVVAVLMKHLEE
SNQDDDDDDVDGDTTEGEGGPLGPERDPRREAPSPTPRGTGSRSPRRHSADTGWSQWGQG
AEGERVSLGGSPSWRPGTRLRFSSDLSLVMVDAVDAELLLMDNLSGSVCRSYGLSSTQGP
PGSPKIPLAEMEALSVTSDLSERSWSPEPQRRPLGAVPSIVIVVAPPRPRPAPPAPSPLL
PRGPARRPLGVSIGSHRGHAVAAGVAFCSGRKNRFAIRYR
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatgcggggcccggcgcggtcatggccgaagaggcggctacatcggaacag
gtcccgggccccgagggaccccaggaggaggatgttcccggagatgccgcggggtcctcc
ccgctgccgtaccccgggttggcccccgtcgccttcttctgcatgcggcagacgagcggc
ccgcgcaggtggtgtctccgcctcgtgtgcgacccgtggttcgagcgtgccagcatgctc
gtgatcctgctcaactgcgccacgctcggcatgttccagccgtgcgccgaggggcagtgc
cgcgcccagcgctgcagcgtgctgcaggcattcgatgacttcatcttcacgttcttcgcg
gtggagatgatcctcaagatgatggcgctggggatctggggccgcgcggggtatctgggg
gacacgtggaaccgcctcgacttcttcatcgtgctggcgggcatgctggagtactcgctg
gacatggagagcgtcagcctctccgctatccgcacgatccgcgtgctgcgcccactgcga
gcgatcaaccgcgtccccagcatgcgcatcctggtgacgctgctgctcgacacgctgccc
atgctgggaaacgtgctgctcctctgcttcttcgtcttcttcatcttcggcatcgtcggg
gttcagctgtgggccggcctgctgcgcaaccgctgcttcctgcgcgaggcgaacgccacc
ctggacgtggacggctcctcgctgccgctctcgcccgtgttccgcaccgaggacgagagc
gaccggcccttcatctgctcgctgccccgcgacaacggcgtgcgcagctgccgcgacctg
ccgaggtcgcgcctcgcgggggggccctgcgcctcgggggccgccctcgggggacgcggt
ggagcggcggggcgccgcgcaacggttcgggccccgcgggcccctacagcccacacggcc
cacacggcccacacggtcactacagcccctacagtccgcacggaggccttggcgcgcaag
ccatggtgtccattcctgagaaccagagcagcggcggggcgcgccgtgtgcgtggactgg
agccgctactacagcgagtgccgccccgggaagaggaatccgcacggaggctccgtgaac
tttgacaacatcggctacgcgtggatcgccatcttccaggtgatcacgctggaggggtgg
gtggacatcatgtattacgtcatggacgcgcactccttctacaacttcatctacttcatc
ctcctcatcattgtcgggtcgttcttcatgatcaacctgtgcctcgtggtcatcgccacg
cagttctccgaaaccaagcagcgtgagaaccagctgatgcacgagcagcgggcgcgcctc
ggatcgcgcggtagctccatcgacagcgcggggggcgaccaggagccgggcagctgctac
caggagctgctgcgctacagcgcgcgcgcctgccggaggctgcggcggcgcgcgctgcac
ctgtggggcgcctgctcctccgcctgctcctccgcccgcaactccgcctcctcgtcgcag
ccgcgctccgccatgcgcggctcctgcctggagcgcggcggctgcctccacgtggccaag
cggcgcccgcgctgctcctgccggcggcaccgctcgtcctccctcctccgccaccactac
cagcagcagagccaccgccggcggcacgtcagccaccaccaccaccatcaccgccaccac
caccaccatcaccacaaccaccaccaccggcgggacggcggcgcggcccggggcaccctc
gctggcggcggcggcagcaggaggaggagaacgtgcaagtcggtccaccgccacatggtc
caccaccaccaccatcaccaccaccactatcacatcggcaacggcagcggccagcagcag
cagcagcagcagtcggcggcggcggcggcgcccgggatcccgcagctggaggcgggagag
gcgggggcacccctgggtcccggggggtcgagcggggccctggtggtgcgtgggcgcggg
gggcgaaccgcctccgtgcacagcgtcttccacgccgactgcgtgcgcctcgactgcccc
cccacgggggtcaagcagccgctgtctccccccacgccacgtgtcacgccccccatcagc
tacccgaccatcatcgcgtcgggccccccacggaacgaggatgcggcgaaagcaaaggcg
gcgccagggagggggggctccattgctccctacagggggctgcggcgcttctcacgcacc
tacagcagttcgcgccgcgactcgggccgctcctcccgcgggtctccctcgctgcttctg
gagcgggagctgcagcgctgcccgcactgcccgtccgacagctccgactgcgattgcagt
gacagcgatagtgggagtgacgcggggtcggggctcggggcagagggacccccgcacccc
cgggacccccgggacccccgggacccccgggacctccggcgtccgagcggccgtcgggac
caggatcggcccgaggaggggccacctcgtcgggtggcccggctccccgcgcgagcgcgc
agatggggggccgcaaggccccgctgggcgcgcgcgtggggaaccgcgggccctcgatgg
gcgcgcgtgagccgctggttccgcgcgatcgtggagagcaagtatttcacccgcggcatc
atggtggccatcctcatcaacagcctgagcatgggcatcgaataccacgagcagcccgag
gagctcactaatctgctggagatcagcaacatggtgttcaccagcatctttgcgctggag
atgctcatcaagctgctggcgtccgggctgctgggctacatccgcaaccagtacaacatc
tttgacggcatcatcgtcattattagcgtgtgcgagatcgtggggcagtcgggtgggggg
ctgtcggtgctgcgcacgttccggctgctgcgcgtgctcaagctggtgcgcttcatgccc
gcgctgcggcgccagctcgtggtgctcatgagaaccatggacaacgtggccaccttctgc
atgctgctcatgctcttcatcttcatattcagcatcctcgggatgcatctcttcggctgc
aagttcagcgtgaagacggagagtggggacacggtccccgaccgcaaaaacttcgactcg
ctcctttgggccatcgtgaccgtcttccagatcctgacgcaggaggactggaacgtggtg
ctctaccacggcatggcctcctcctcaccctgggccgcgctctacttcatcgcgctcatg
acattcggaaactacgtcctcttcaacctcctcgtggccatcctggtggagggctttcag
gccgagggagacgcgagtcgctccgactcggacgacgacgtgggcggctcggcgttggac
gaggagggggactcagctaaagggctcccagtgttggcctcaaatggtcacgcggacccc
aaaggggtgggggggccggcccccacggacgccgcctcttctcccgttggggagccgtgg
caccacgtcgtcctcgacgcttccgcgtgcattgtcggcgaaggaatctcggggggcccc
ggggttctcgtgggggcggctgtcctcgtcgcaggcccggggccccgagcagcccgcagg
tcgagtgggtcgcgagggggggccgggtccccccgccgccagggggagcgccgctcgctg
ctctcgccggacgacggcgacgaccacgagttcatcgacgcgccgggggcggcgagcggc
ggggacgagggcgcgggggcgagggagggggcgagggaggaggcgcccgcggcgcccgga
gcggcgcccggagcggcgccccccgtggcgccccacgacgtcgcggcggtgcgcgtggcc
ctgcaccggcccgcactgccgctgcccctgctcatgcccgtggcgctgcacctgtctctg
cccgactgcaatgggaagacacccccccatggctcggccaaacatgcgccgccagacccc
ctggatgatattgacgatcgctggtggttccggctgggccgccgcctccagcgccaccgg
ccgcgctgctgcgtggtgcgcgcggattggtcgctctacgtgttccacccgcacaaccgg
ttccgctgggtgtgccgcaagatcatcgcgcacaaggtgtttgaccacgtggtgctgctc
ttcatcttcctcaactgcatcaccatcgcgctggagcggcccgacatccccagctacagc
gccgagcgcgtcttcctcactgtctccaactacatcttcaccgccgccttcgtcaccgag
atggctattaaggtgacggcgctgggcctggcgctgggggatggcgcgtacctgcgcagc
tcgtggaacctgctggacgggctcctggtcctcgtctccgccgtggacattgtcgtgtcc
ctcgcctcgtcgggaggcgcgcgcatcctgggtatcctgcgcgtgctccggctcctgcgc
accctgcggcccctgcgagtgatcagccgcgcgccgggcctgaagctcgtggtggagacg
ctgatcacgtcattgaagccgattgggaacatcgtcctcatctgctgcgcctttttcatc
atcttcggcatcctgggggtacagctcttcaaggggaagttctacttctgcgaggggacg
gacacccggaacatcacgagccgtgctgactgcgcgcgtgcgcactaccgttgggtgcgc
cgcaagtacaactttgacaacctggggcaggcgctcatgtccctgttcgtgctggcctcg
aaggacggctgggtgaacatcatgtacgacggcctggacgccgtgggtgagaatttgcag
cccgtgcggaaccacaacccgtggatgctgctctacttcatctccttcctgctgctcgtc
agcttcttcgtgctcaacatgttcgtgggcgtcgtggtggagaacttccacaagtgccgg
cagcaccaggaggccgaggagacgcggctccgcgaggagaagcgactccgccgggcagag
aaacggaggcgcaacggaaaggacgcgggggggagacgcgctaagcagggcgctcacaaa
aaccataaagaagcgcagcagaagccgtactacgctgactactcgcgcactcgcatgctc
gttcacggcgcgtgcacgtccagctacctggacctcttcatcaccgtggtcatcggcctc
aacgtcgtcaccatggccatggagcactacgaccagcccaggtcgctggaggaggcgctc
aagtactgcaactatttcttcacgacggtgttcgtgctggaggcggccttcaagctcgtg
gcgtttggcatacgaagatacttcaaggacaggtggaaccagctggatctcggcatcgtg
ctgctgtccatcatgggcattacgctggaggagatcgagatgaatgcatcgctgcccatc
aacccgaccatcatgcgcatcatgcgcgtactgcgcatcgcccgcgtgctcaagctcttg
aagacagccacagggatgcgctccctcatcgacaccgtggtgcaggcgctgccacaggtg
gggaaccttggcctcctcttcctgttgctcttcttcatctacgcggccctgggggtcgag
ctgtttggccgcctgatctgtgacgacgagaccccgtgcgagggccttacccgtcacgcg
accttcgaaaacttcggcatggccttcctcacgctgttccgcgtgtccacgggcgacaac
tggaatggcatcatgaaggacacgctgcgagagtgcggggccgggctccccgcggagccc
ccgggctgcgtggcgcacctcccgctcatctcgcccgtctacttcgtgacgttcgtgctc
acggcgcagttcgtgctcgtgaacgtggtggtggccgtgctcatgaagcacctggaggag
agcaaccaggacgacgacgatgacgatgtggatggagacaccacggagggcgaggggggc
cccctcgggcccgaaagggacccgcgcagggaggccccctccccgacgccgcggggaacg
ggaagccggtccccccggcggcacagcgctgacaccgggtggtcccagtgggggcagggg
gccgagggggagcgcgtctccctgggcgggtccccctcgtggcggccggggacccggctg
cggttctcgtcggacctgtcgctggtgatggtggacgcagtggatgccgagttgctgctc
atggacaacctgtcgggctccgtgtgccgctcctacggcctgagctccacccagggaccg
cccggctccccgaagatcccattggccgagatggaggcgctgtccgtgacctccgacctg
tcggagcgatcgtggtccccggagccgcagcgccgcccgctcggcgccgtcccctccatc
gtcatcgtcgtcgcccctccgcgtcctcgccccgccccccctgccccctcgccgctgctt
ccccgggggcccgcacggcggcctctcggcgtaagcatcggcagccaccggggccacgcg
gtcgccgctggtgtcgcgttctgctccggtcgcaagaatcggtttgcgattcgctaccgg
taa
DBGET
integrated database retrieval system
