Lethenteron reissneri (Far Eastern brook lamprey): 133340832
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Entry
133340832 CDS
T09663
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133340832
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133340832
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133340832
03029 Mitochondrial biogenesis [BR:
lrj03029
]
133340832
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133340832
Membrane trafficking [BR:
lrj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133340832
Mitochondrial biogenesis [BR:
lrj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133340832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
133340832
NCBI-ProteinID:
XP_061405239
LinkDB
All DBs
Position
10:4466999..4557848
Genome browser
AA seq
1907 aa
AA seq
DB search
MKLFVFLVNTGATLTFDTELALQTVAELRHAIHTKYRIGVQHQVLVVSGGECLAGERRVC
SYSAGTDTNPIFLFSKELILHDRAPCVSRVVLPGEAQMEPKVEESVIMPAVFHTVTLRTQ
LALEMQELAQRLCMVCESLVHDEHMQHQGWAAVTANLDDCSSAFAGLLTAFTRAYAAFLE
SRRDILAQLSELGDAVTVMAQIPLLQCLTASASSVPSVSRRRDSLCRLADHSDPGRLSAD
LSSSASSRPAGRPRARAGPASPEGPGTPPPKCPSGGADDGRLSPGPEGDGGDDGGGRIKG
SFNVSLLDWVNVQDRPNDVETLVRKCFESMSRLEPGIVQPFLGDCQETLAKMDNPSMKSI
RGLEDRLFVLDQLLASCQRLVTEQKELAQGFLANQKRAENLKDPSVLPDLCRSHANQLVI
MLSNHKKLLDVKHRCATAKQELTDNLHVRLRWCYYVMHHADLGREKLQALCHVLRELTGR
VGAAREVALAPRLYCLAATETLRRRAFSTHYRRWASLLVRDGKELYQAERERREAFRQIF
GHSFLKGRLFQGLESWPPSTFCTREPRAFDEQLPAVTLEDLHFLQSHSPPEMQPYLQLPT
LCDFELLREHSARGRRLARAVRGAQDASLALAQLLSTKTLVGRSDGRGEAGSWEGESPAS
PDRPGSLLLLSPPSHGDTGDPGREDAGAHGGHDGDPLTRDNRDLSPDSIDSQVFDFETIN
HPAAETHPPLSTAASTAAAASAATSIAAAAATAQAISPRSAGLLQSPDAVVESLYASVIN
AIDSQRRMRREGGDGDGGDGGGDGAMSDSRLSSPHPDSWSSPSNRSDVRSRSGVARGRGC
AAAFTALRASTAGVRRELAGLGEQVRSDGRQLAGLLADARRHLEEALPAHRESSSDSTGA
ANDVERRPLADPSHHLAQLQQQQREEEEEVRVRGLDAELTCEAERVRGLEVQLAQEAERR
SDLETELAEEAERCQGLRVELAQEAQRRNSQQVLLAQQAERKMSLEVELTQEAEKHRGLA
AELTQETERRVGLEKELARETERRMSLETDLVQETGRRVGWETELTQQAEKRVTLEKELV
VESERRHFLESELAQEAERRVGLETELAEEAERRVGLETELAKEAERRVGLETELAEDAG
KRMGLEKELAREAERRVGLETELVQEAERRVGLETELALEAQKRRALETKLSDESKKTVG
LEAQLAEETARSQGLTAELTQETERSQTLETMLSEESERRERLEMELILEAESHQALDTK
LAEEAQKRTGLMVELARETERRRNLEAELVQEAETRVSLETELTQEAERWRGLAAGLAQE
TNRRILLEADLAHEVKAHRELVAALADETERRHELQAELADRAAEREASLHGLAALLEHE
RELAVAELLSCHEAEVARLTAELRQAETRAQRLEEQGEEAGGLTVELQEGVLDVEWRSRE
ASRGRRREKPVGVALKTAGSEAGRHQQQQHQQHQQQQQQGLTIAAERGLKTGASSEPQGS
AGGERLIKGKVITELGEKLQRLLEQHDRDKEAIEKLLSEKTFLEETVARLKGTHDLAAAS
PSSPNVAEARAQQPPPPPTQPTQPTQPPPLQPRGWLRARGSSVGHGTSAVAGQPGLLQAV
AWGLTSGVLGAGEAREGRKEPSGGGGGGGGAAGGGAGVVSAAMPLERTRTPLLFLPVECG
DSVGGDGGGGGDGAAMAMAGDGLDASVVALRENAPSEDKQRVLMLEKALHQKEKEHSRLV
QRLMSQSVAPVSPRQPEKLAIKDFQVGDLVLIILDERHDNYVVFTVGPTLYFLHAESLPP
LELRPVPGVPRKPWVLGRITEKEYCQAKKAQNRFRVPVGTKFYRVKAEPWGRRTSVGRST
PPHPPPPQQPPQADDAASGSSLAGPTVGGGGGPGADDFPALGGHPLL
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttgtgttcctggtgaacacgggtgccaccctcaccttcgacaccgagctg
gcactccaaaccgtggcggagttgaggcacgccatccacaccaagtatcgcatcggagtt
cagcaccaggtgctggtggtcagcggcggcgagtgcctggcgggcgagcggagggtgtgc
agctacagcgccggcacggacacgaacccgatcttcttgttcagcaaggagctgatcctg
cacgaccgggcgccgtgcgtgagccgtgtggtgctgcccggcgaggcgcagatggagccc
aaggtggaggagtcggtgatcatgccggcggtgttccacaccgtgacgctgcgcacgcag
ctcgcgctggagatgcaggagctggcgcagcggctgtgcatggtgtgcgagtcgctggtg
cacgacgagcacatgcagcaccagggctgggcggccgtcaccgccaacctcgacgactgc
agctcggccttcgcgggcctcctgacggccttcacgcgcgcctacgcagccttcctggag
tcacgccgcgacatcctcgcccagctctccgagctgggcgacgccgtcaccgtcatggct
cagatcccgctgctccagtgcctcaccgcctccgcctcctccgtcccctccgtctcccgc
cggcgcgacagcctgtgccggctcgccgaccactccgaccccggccgcctctccgccgac
ctctcctcctccgccagctcgcggccagcggggcggccgcgcgctcgggccggcccggcc
tctcccgaaggccccgggacgccgcctccgaaatgtccaagcggcggcgctgacgacggc
cgactttcaccgggccccgagggcgacggtggagacgatggcggtggccggataaagggc
agcttcaatgtgtcgttgctcgactgggtgaacgttcaagatcgacccaacgacgtggag
acgctcgtccgaaagtgcttcgagtcgatgagcaggctggagcccggcatcgtgcagccc
ttcctgggcgactgccaggaaactctggccaagatggacaatccgagcatgaagtcaatc
cgcgggctggaggaccggctcttcgtgctcgaccagctgctcgcctcctgccagcgcctc
gtcaccgagcagaaggagctggcgcagggcttcctggcgaatcaaaagcgcgcggagaac
ctcaaggacccgtcggtcctgccagacctgtgccgcagccacgccaaccagctggtgatc
atgctgagcaaccacaagaagctgctggacgtcaagcaccgctgcgccaccgccaagcag
gagctcaccgacaacctgcacgtgcgcctgcggtggtgctactacgtgatgcaccacgcc
gacctgggccgcgagaagctgcaggcgctgtgccacgtgctgcgcgagctcacgggccgc
gtgggcgccgcgcgcgaggtggcgcttgccccgcgcctctactgcctggccgccaccgag
acgctgcggcggcgcgccttctccacgcactaccggcggtgggcgagtttgctggtgcgt
gatgggaaagagctctaccaggctgagagagagaggagagaggcgttcagacagatcttc
ggccacagcttcctcaaagggcggctcttccaggggctcgagtcgtggcctccgtcgaca
ttttgcacgcgtgagccacgcgcgtttgacgagcagcttcccgcggtgacgctcgaagac
cttcacttcctgcagagccacagcccccccgagatgcagccctacctgcagctcccgacg
ctgtgcgactttgagctgctgcgggagcactcggcacgcggacggaggttggcgcgggcc
gtgcgcggtgcccaggacgcgtcgctcgccctcgctcagctcctctccaccaaaacgctg
gtgggcaggagcgatggccgtggggaggccgggagctgggagggggagagccccgcgtct
cccgaccgccccggcagcctcctgctcctgtcgccgccgtcgcacggggatacgggcgac
ccgggacgcgaggacgcgggggcccacgggggccacgatggggaccccctcacgagggac
aacagggatttgtccccggacagcatcgactcgcaggtgttcgacttcgagacgatcaac
cacccagcggcggagacgcacccaccgctttccaccgcagcgtcgaccgcagccgcggca
agcgcagcgacgtcaatcgcggccgccgccgccaccgcccaggccatcagcccccggtcg
gcgggcctcctgcagagcccggacgcggtggttgaatccctgtacgcgtctgtcatcaac
gccatcgacagccagcgacggatgcggagggagggcggcgatggcgatggtggcgatggt
ggtggcgatggagcgatgagcgattcgcgtttgtcctcgcctcaccccgactcttggtcg
tcgccgtcgaatcggtccgacgttcgctcgaggagcggcgttgctcgaggccgcgggtgc
gcggctgcgttcaccgcgctgcgggcgtcgacggcgggagtgcgccgggagctggccggg
ctcggagagcaggtgcgcagcgacgggcgccagctcgccggcctgctcgccgacgcccgc
cggcacctggaggaggctctgccggcacaccgggagtctagctcagacagcacgggcgca
gctaacgacgtggaaaggcgacctctcgctgacccctcacatcacctggctcaactacag
cagcaacaacgagaggaggaggaggaggtgagggtgcgtgggttggatgcggagctcacc
tgtgaggccgagagggttcgagggctagaggtgcagctcgcccaggaggccgagaggaga
agcgacctggagacggagctcgccgaggaggccgagaggtgtcaaggcctgagggtggag
ctcgcccaggaggcacagaggaggaacagtcagcaagtgctgctcgctcagcaggccgag
aggaaaatgagcctggaggtggagcttacccaggaggccgagaagcaccgtgggctggcg
gcagagctcactcaggagaccgagaggagagtaggcctggagaaggagcttgctcgggag
accgagaggagaatgagcttggagactgacctcgtccaggagaccgggagaagggtgggc
tgggagacggagctcactcagcaagctgagaagagagtgaccctggagaaggagctcgtg
gtggagagcgaaaggaggcattttctggaatcggagcttgcccaggaagccgagaggcga
gtaggcctggagacggagcttgccgaggaggccgagaggcgagtaggcctggagacggag
cttgccaaggaggccgagaggcgagtaggcctggagacggagcttgccgaggatgctggg
aagagaatgggcctggagaaggagctcgctcgggaggccgagaggagagttggcctggag
acggagcttgtccaggaggctgagaggcgagtaggcctggagacggagcttgccctagag
gctcaaaagcgccgagcgcttgagacgaagctctctgatgaatccaagaaaacggtgggc
ctggaagcgcagcttgccgaggagaccgccaggagccaaggcctgacagcagagctcacc
caggagaccgagagaagccagaccctggaaacgatgctcagtgaggagtccgagaggcga
gaacgcctggaaatggagctcatcctggaggccgagagtcaccaagctcttgacacgaag
ctcgctgaggaagcgcagaagaggacgggcctcatggtggagctcgcccgggagaccgaa
agaagacgcaacctggaggcggagctcgttcaggaggccgagacgagagtgagcctggag
acggagctcacccaggaggccgagaggtggcgcggcctggcggcgggcctcgcccaggag
accaacaggaggattctcttggaggcagacctcgctcacgaggtcaaagcgcaccgggag
ctggtggcggcgctcgccgacgagactgagaggcggcacgagctgcaagcagagctcgcc
gacagggccgcggagcgggaggcgagcctgcacggcctggcagcgctgctggagcatgag
cgggagctggccgtcgccgagctgctgagctgccacgaggcggaggtggcgcggctcacc
gcggagctccgccaggcagaaacgagggcccagcggctggaggagcagggggaggaggca
ggaggtctcaccgtggagctccaggagggggtgctggacgtggagtggaggtctcgcgag
gcttccagggggaggcggagagagaagccggtcggggtggcgctcaagacggcggggagc
gaagcggggcgtcatcagcagcagcagcatcagcagcatcagcagcagcagcagcagggc
ctgacgattgcagccgaaagggggctcaagaccggggcgtctagcgagccgcagggctcc
gccgggggggagaggctcatcaaggggaaggtgatcacggagctgggcgaaaagctgcag
aggctcctcgagcagcacgaccgcgacaaagaggccatcgagaagctgctgtcagagaag
acgttcctggaggagacggtcgcccgcttgaaaggaactcacgacctcgctgccgcgtct
ccgtcttcccccaacgtcgccgaagctcgggcgcaacaaccgccgccgccaccgacacaa
ccgacacagccgacacagccgccgccgctgcaacccagaggctggctccgggcccgcggc
tcctcggtgggacacggcacgagtgcggtcgcggggcagccgggcctgctgcaggccgtg
gcgtggggactcacgtccggcgtgctgggtgccggggaggcgagggaagggaggaaagag
ccttctggtggtggtggcggtggtggcggtgctgctggtggtggtgctggggtggtgtcg
gccgcaatgccccttgagagaactcgtactcctctactcttcctccctgtggagtgcggt
gacagtgttggtggtgatggcggcggcggcggtgatggggcagcgatggcgatggccggg
gatgggttggatgcgagtgtcgtcgcgctcagggagaacgcgccgagcgaagacaagcag
agggtgctgatgctggagaaggccctgcaccagaaggagaaggaacattcccggctcgtc
cagaggctgatgtctcagagcgtggcacccgtgtctcctcgccagcccgagaagctggcc
atcaaagacttccaggtgggagacctggtgctcatcatcctggacgagcggcacgacaac
tacgtcgtcttcacggtggggcccaccctctacttcctgcacgccgagtcgctgccgccg
ctggagctgcgccccgtccctggcgtgccacgcaagccctgggtgctgggcaggatcacc
gagaaggagtactgccaggccaagaaggcccaaaaccgcttccgcgtcccggttgggacc
aagttctaccgggtcaaggccgagccgtggggccgccggacctcggtcgggcggtccacg
ccgccacatccgccgccaccgcagcagccgccacaggcggacgacgcggcctcgggctcc
tcgctcgccgggcccaccgtcggcggcggcggcggccccggggcggacgacttccccgca
ctcggaggccaccccctcctctag
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