Lethenteron reissneri (Far Eastern brook lamprey): 133340909
Help
Entry
133340909 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase Trim36-like
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133340909
04121 Ubiquitin system [BR:
lrj04121
]
133340909
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133340909
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
133340909
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133340909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
fn3
COS
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4_4
SPRY
Motif
Other DBs
NCBI-GeneID:
133340909
NCBI-ProteinID:
XP_061405421
LinkDB
All DBs
Position
1:complement(5304654..5326263)
Genome browser
AA seq
895 aa
AA seq
DB search
MKNLERELMCPVCEELFTHPIILPCQHSWSSSSSTTSPWVPPAPHEASTEPASPSASPVP
SPRRRSLRGGGSPSVERLEKVLRAAVLLRKLTPKKSESLVNLTAAPLRPARPGPRGGCSF
PCPACDCDVDLGPKGIAGLFRNFTLETIVERFRQAARAATAVMCDLCYPPPTEATKSCLD
CRKSYCNECFKVHHPWNTPKATHEYIGPTKNFRPKVLMCPEHEAEKVNMYCEVCRRPVCH
LCKLAGIHANHKVTNINSAYKALKEKLAKSINLLVSKEDQVKEQLGVIETLIKDTETGGD
LAARSVTEAFGGLEEAVRARRAAMSHRLEGCRDDVACRLHAQHSECEQLLQSSGLVGLAR
EFLKESDPSCFMQTAKLLHSRIMRATDRFKSFEADVVDASFSGFTVNVAREQALLGSLDF
LKAPETPVLDPSRSAIYKDAQVSWSLPEGSAPADRFQLEFRPPPRRRPSPVPDRGTPDPA
SGDDVDDPEWSRVDGIRSTSHVVTGVQPGVDLTVRVRAVNAAGASAFSAEMTMAAPPAQV
FSFLLDDDCGYERERLVLSPRRASVDSVVGLPALLASEGLAGGSAGSSSAGDNDDPHRCH
GDGVNGAAGTAGPLAPLSFIAGDAAVRGGRHFWVVRVRPSSFLVRVGVAAPEALRCWLRR
AVTGGGKGSAGGKDAAARGKGVRHKPDSPSSAAPSAAPSAAPSCAFVSVGMGQVVAPSWA
QLPAPPPSSPAKGTTRAAPQAPASASPQHRQQQQQPQQQPAPRATSARSQRAAKPLVRSA
SAPKSAPGTPRRAAASGGRNARVSALPARLGVCLDHGAGTVAFYDADGGGATRLCEMPVD
CSGPVFPVFAFLGGGGLELEVADGGVCADGTGGAGGGGKRGAAPPLSAQPGVNGV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctggagcgcgaactgatgtgcccggtgtgcgaggagctcttcacgcacccc
atcatcctgccgtgccagcacagctggtcctcctcctcctccaccacctcgccgtgggtc
ccgccggcgccgcacgaggcctccaccgagccggcgtcccccagcgcgtcgcccgtgccg
agcccgcgccgccgcagcctccgcggcgggggctcccccagcgtcgagcggctggagaag
gtgctacgtgccgcggttttgttgagaaaactgactccgaagaaatcagaatcccttgtg
aacctgacggctgccccgctgcgccccgcccgcccgggcccccgcgggggctgctcgttc
ccgtgcccagcctgcgactgcgacgtcgacctggggcccaaagggatcgccggcctcttc
cgcaacttcacgctggagaccatcgtggagcgattccgacaggcggccagggccgcgacg
gccgtgatgtgcgacctgtgctaccctccgccgaccgaggccaccaagagctgcctggac
tgccgcaagagctactgcaacgagtgcttcaaggtgcaccacccgtggaacacgcccaag
gccacgcacgagtacatcggccccaccaaaaacttccggcccaaggtgctgatgtgcccg
gagcacgaggcagagaaggtgaacatgtactgcgaggtttgccgccgccccgtgtgccac
ctgtgcaagctcgccggcattcacgcgaaccacaaggtcaccaacatcaacagcgcctac
aaggcgctcaaggagaaattggccaagagcatcaacctgctggtgagcaaggaggaccag
gtgaaggagcagctgggagtcatcgagactctgatcaaggacacggagacgggcggcgat
ctcgcggcgcgcagcgtcacggaggccttcgggggcctggaggaggcggtgagggcgcgg
cgcgcggccatgtcgcaccgcctggagggctgccgcgacgacgtcgcgtgccggctgcat
gcgcagcactccgagtgcgagcagctgctgcagagctcggggctcgtgggcctcgcccgc
gagttcctcaaggagagcgacccctcctgcttcatgcagaccgccaagctgctgcacagc
aggatcatgagggcgacggatcgcttcaagtcgtttgaggcggatgtggtggacgcgtca
ttctcggggttcacggtgaacgtggctcgggaacaagccttgctgggctccctcgacttc
ctcaaggccccggagacgccggtgctggacccgagccgcagcgccatttacaaggacgcc
caggtgagctggtctctccccgagggctccgctcctgccgatcggttccagctcgagttc
cggccccctccgcggcgccgcccgtcgcccgtcccggaccgcggcaccccggatccggct
agcggagatgacgtcgacgacccggagtggagccgcgtggacgggatccggagcacgagc
cacgtggtgacgggagtccagcccggcgtggacctcacggtccgagtccgggccgtcaac
gcagccggagcgagcgcgttcagcgcggagatgacgatggcggcgccgccggcgcaagtc
ttcagcttcctgctggacgacgactgcggctacgagcgcgagcggctcgtcctctccccg
cgccgcgccagcgtcgacagcgtcgtcgggctgcccgctctgctcgcgtccgaggggctt
gccgggggcagcgccggcagcagtagcgccggcgacaacgacgacccgcaccgctgccac
ggggacggcgtcaacggcgccgccggcaccgccggcccgctggcgccgctgtcgttcatc
gccggggacgcggccgtgagaggcgggcgccacttctgggtggtgcgcgtgcggcctagc
agcttcctggtgcgcgtcggggtggcggcgccggaggctctgcggtgctggttgcgtcgt
gccgtcaccggcggcggcaaaggcagcgccggcggcaaggacgcggccgcgcgggggaag
ggcgttcggcacaagccggacagcccctcctcggccgccccctcggccgccccctcggcc
gccccctcctgcgccttcgtctccgtgggcatgggtcaggtggtggcccccagctgggcc
cagctgcccgcgccccccccctcctctcccgccaagggcacgacccgggcggcaccgcag
gcgccggcgtcggcgtcgccgcagcaccgccagcagcagcagcagccgcagcagcagccg
gcgccacgcgccacctccgcccgctcccagcgagccgcgaagcccctcgttcgttccgcc
tccgcgcccaagtcggcgccggggacgccgcgacgcgccgcggcctccggggggcggaac
gcgcgcgtgtcggcgctgccggcgcgcctcggcgtgtgcctggaccacggcgccgggacg
gtggcgttctacgacgccgacggcggcggcgcgacccggctctgcgagatgccggtcgac
tgctcgggccccgtgttccccgtgttcgcgtttctgggcggcggcgggctggagctggaa
gtggccgacggtggggtctgcgccgacggtaccggtggagccggcggcggcggcaagagg
ggagccgcgccgccgctgtcggcacagcccggcgtgaacggtgtctga
DBGET
integrated database retrieval system
