Lethenteron reissneri (Far Eastern brook lamprey): 133341248
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Entry
133341248 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04517
IgSF CAM signaling
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133341248
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133341248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133341248
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133341248
Intermediate filaments
Intermediate filament-binding proteins
133341248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
133341248
NCBI-ProteinID:
XP_061405718
LinkDB
All DBs
Position
11:complement(1138656..1224185)
Genome browser
AA seq
2424 aa
AA seq
DB search
MSASSPVPESEGGVGGREAGKRACVMLTTVSVGNSSSSNNGNNGNNGRWELNEEDRENEN
STSRLYERSRIRALADEREAVQKKTFTKWVNSHLARVSCRISDLYTDLRDGRMLIKLLEV
LSGETLPKPTRGKMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTII
LRFQIQDISVQTEDSKETRSAKDALLLWCQMKTAGYANVNVHNFTTSWRDGLAFNAVIHK
HRPDLVDFEKLKKSNAQHNLQHAFNAAEQHLGVTKLLDPEDVSVDQPDEKSIITYVVSFY
HYFSKMKALAVEGKRIGKVLESAIEAERMVERYESLASELLEWIGGTIAALNSRDFPNSL
VGVQQQLHAFSSYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLVAEINR
AWERLEKAEHGRELALREELIRQEKLEQLARRFDRKAAMRETWLAENQRLVMQDNFGADL
AAVEAATKKHEAIETDMAAYEGRVRAVEGVARELEAERYHEVARVTRRRDGVLQLWRRLQ
ELLAARRTRLEITLALQRAFHEMLYTGAWMDEMKLRLLSQECGKHLLGVEDLLQKHALVE
ADVAAQADRVKAVNAAALRFAEEVDGYRPCDPEVASERAGQLEASYAELCALCAARRARL
EQARALHLFLWEAEEVEAWVRQVEPLLASEDAGHDLAAVLRLLARHRAFEDELSGRRAQL
QQTLRLGEAAAAALAPPLADAAASEEEKREAERDAQAARARSAELEKLWASLELAASRRA
ERLRASESLHQLLSDSADVEAWARDAALLVAAGGDVGNDEFSTQALARKHRDVVEEIEGY
RPVIDSLREQAAALPASLAEPAGVRERLQRLEDAYGELAALAAERGRRLQDALALYTIHS
ETAACLLWLDEKSQWLDALDIPEKLEDLEVVQHRFESLEPEMNGLASRVAVVNQLARQLL
GSGHASEDDIKAKQDLLNARWSEFRELAESKKEALQAQLTLQSFQLECHETQQWIREKTR
LIESTQGLGNDLAGVMALQRKLSGMERDLAAIEVKVGDLQGEAERLAQRHPESSGAVRGQ
LADTAAVWGALRGTLRAREDSLGEASKLQKFLQDVDDFQAWLSKTQKAVASEDVPSTLPE
AEKLLAQHEAIKNEISNYSEDHRRMREMGEEVTRDQSDPQHVFLRQRLQALHTGWAELHS
MWDNRRALLAACHAYLAFARDARQADGVLSNQEYALSRVEMPATLQSAEEAIKKHEELTT
SMEANDEKVGGVLDTGRKLVGEGNFNADKIQEKMDSISERREKNQAAAADLLGRLRDNRD
LQKFLQDCQELSLWMNEKMLTAQDMSYDEARNLHSKWQKHQAFMAELASNKEWLDKIKKE
GEQLIRDKPETEGIVQEKLSELGTVWDHLESTTQLKAQRLFDANRAELFTQSCADINMWL
AELETQITSEDHGSDLTSVNILLKKQQLLEKQMEVREKEVRELQDQVLVLRQEQLKEGAG
GPGEGGEEEVDGMRASVEGRFKQVTQPLEERRLKLLASKEVHQFTRDLEDEILWVEERLP
LATSTDHGNSLQSVQLLVQKNQNLQKEMAGHEPRVHEVCERGEALAERGLGEGGAEAGAA
ARRLGELRALWGRLRDEAGARSARLHEAHRAQRYYFDVAEAESWMSEQELYMIAEEKVKD
EQSALALVKKHAIMEQGVEDYANVIRQLAETSRSLVADSHPESDRILLRQSQADKQYASL
KDLAEERRGKLSEKHGLFQLSREVEELEQWIAEREVVASSHELGQDYEHVTLLEERFAEF
ARETAATGHERVSGVMAAADVVIAGGNAESAAAAAEWKDTLAEGWAELLELMETRAQMLA
ASRRLHRFVHDAREVLGRVREKQQLLPDELARDLISVESQQRAHAAFETDVQAFGTQVTA
LQESARGLQESYAGDKAEEIRQREREAVSAWEGLLAACATRRQLLSDTWEKCRFFSAARD
LLLWMEGIERQMEAQEKPRDVSSAELHITNHQGVKAEMDARNDSFVAVVEMGQSLLDRGH
YASDEIEEKLEQLKDKQKGMVLHWEDRAEWLKLMLEVHQFARDAGVAEAWLLAQEPHVTC
QEFGESADEVDELLKRQEAFEKSAGTWEERIALLERLTTLEVREHKRREARLAEERRQEQ
LERERQEKEEEEAARRAAEQEEREKELMEQTVQNGIPSDQESPKANGEDAKEADGSAVPT
AADEVQPATLKEGSLHRKHELDANGKKASSRSWNTVFCKLTDLGLGFYKDNKSAAAGALY
HNEPPLPLAGAACEVASDYKKRKHVFKLQLADGSEYLFQAKDDDEMNAWIQSICGNGMGS
GSASGVGMGGSVSASGLPSGGGGDTASLGGGGGEPQQPQQQQQQQSPAAVVLRRKPTSPG
SAASDTTSPSRKSEKRFSFFGKKK
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcttctcccgtcccggagagcgagggcggcgttggggggcgcgaggccggc
aagcgcgcctgcgtcatgctcaccaccgtgtcggtgggcaacagcagcagcagcaacaac
ggcaacaacggcaacaacgggcgctgggagctgaacgaggaggaccgagagaatgagaac
agcacgtcgaggctgtacgagcgctcgcgcatccgcgccctcgcagacgagcgtgaggcc
gtgcagaagaagacgttcaccaagtgggtgaactcgcacctggcgcgcgtgtcctgccgc
atcagcgacctctacacggacctccgcgatggacgcatgctcatcaagctgctggaggtg
ctctccggggagacgctgcccaagcccacgcgtggcaagatgcgcatccactgtctggag
aacgtggacaaggcgctgcagttcctcaaggagcagaaggtgcacctggagaacatgggc
tcgcacgacatcgtcgatggcaaccaccgcctcattctgggcctcatctggaccatcatc
ctgcggttccagatccaggacatcagcgtgcagacggaggacagcaaggagacccgctct
gccaaggacgcgctgctgctgtggtgccagatgaagacggcgggctacgccaacgtgaac
gtgcacaactttacgaccagctggagggacggcctggctttcaacgccgtcattcacaag
caccggccggacctggtggactttgagaagctaaagaagtcgaacgcgcagcacaacctg
cagcacgcgttcaacgcggccgagcagcacctgggggtcaccaagctgctcgaccccgaa
gacgtgagcgtggaccagccggacgagaagtccatcatcacctacgtggtctccttctac
cactacttctccaagatgaaggccctggccgtcgagggcaagcgcatcgggaaggtgctg
gagagcgccatcgaggcggagcgcatggtggagcgctacgagtcgctggcatcggagctc
ctcgagtggatcggcggcaccatcgcggcgctcaacagccgagacttccccaactcgctg
gtgggcgttcagcagcagctgcacgccttcagcagctaccgcaccgtcgagaagccgccc
aagttcacggagaaaggaaacctggaggttctgctcttcaccatccagagcaagatgagg
gccaacaaccagaaggtgtacacgccgcgcgaggggaagctcgtggcggagatcaacagg
gcgtgggagcggctggagaaggcggagcacgggcgcgagctggcgctgcgtgaggagctc
atccgccaggagaagctggagcagctggcgcgccgcttcgaccgcaaggcggcgatgcgc
gagacctggctggcggagaaccagcggctcgtcatgcaggacaacttcggcgcggacctg
gcggcggtggaggcggccacgaagaagcacgaggcgatcgagacggacatggcggcgtac
gaggggcgcgtgcgcgccgtggagggcgtggcgcgcgagctggaggcggagcgctaccac
gaggtggcgcgcgtgacgcggcgccgcgacggcgtgctgcagctgtggcgccgtctgcag
gagctgctggcggcacggcgcacgcggctggagatcacgctggcgctgcagcgagccttc
cacgagatgctctacaccggcgcctggatggacgagatgaagctgcgcctgctgtcgcag
gagtgtgggaagcacttgctgggcgtggaggacctcctgcagaagcacgccctcgtggag
gccgacgtggccgcgcaggccgaccgcgtgaaggccgtcaacgcggccgccctgcggttc
gccgaggaggtggacggctacaggccgtgcgaccccgaggtggcgagcgagcgagcgggg
cagctggaggcgtcctacgcggagctgtgcgcgctgtgcgcggcacggcgcgcacgcctc
gagcaggctcgcgccctgcacctcttcctgtgggaggccgaggaggtggaggcctgggtg
cggcaggtggagcccctcctcgccagcgaggacgccggccacgacctcgcggccgtgctg
cgcctgctggctcggcaccgcgcattcgaggacgagctgagtggccgccgggcccagctg
cagcagacgctgcgcctgggcgaggcggccgcggcggcgctggcgccccccctggccgac
gccgccgcctccgaggaggagaagcgcgaggcggagcgcgacgcgcaggcggcccgcgct
cgctccgccgagctcgagaagctgtgggcctcgctggagctggcggcgtcgcgcagagcc
gagcgcctgcgggcctccgagtcgctgcaccagctgctgtcggactcggccgacgtcgag
gcctgggcccgggacgcggcgctgctggtggcggccggcggcgacgtgggcaacgacgag
ttctccacgcaggcgctcgcgcgcaagcaccgcgacgtcgtggaggagatcgagggatac
aggccggtgatcgactcgctgcgggagcaggcggcggcgctgcccgcgagcctcgcggag
ccggccggcgtgcgggagcggctgcagcgcctggaggacgcgtacggcgagctggcggcg
ctggccgccgagcgcggccgccgcctgcaggacgcgctggcgctctacaccatccacagc
gagacggccgcctgcctgctctggctcgacgagaagagccagtggctcgacgcgctggac
atccccgagaagctggaggacctggaggtcgttcagcaccggtttgagagcctggagccc
gagatgaacggtctggcgtcgcgcgtcgccgtggtcaatcagctggcccggcagctgctg
gggtcggggcacgccagcgaggacgacatcaaggccaagcaggacctcctgaacgccagg
tggagcgagttccgggagctggcggagagcaagaaggaggcgctgcaggcgcagctgacg
ctgcagagcttccagctggagtgccacgagacgcagcagtggatccgcgagaagacgcgt
ctcatcgagtccacgcagggcctgggcaacgacctggccggggtcatggcgctgcagcgc
aagctgtccggcatggagcgagacctggctgccatagaggtgaaggtgggggacctgcag
ggcgaggcggagcggctggcgcagcgccacccggagagctccggcgccgtgcgtggccag
ctggccgacacggccgccgtgtggggcgccctgcgcggcacgctgcgcgcccgcgaggac
tccctcggcgaggcctccaagctgcagaagttcctgcaggacgtcgacgacttccaggct
tggctctccaaaacccagaaggccgtggcgtcggaggacgttcccagcaccctccccgag
gctgagaagctcctggcgcagcacgaagcgatcaagaacgagatcagcaactacagcgag
gaccaccggcgcatgcgggagatgggcgaggaggtgacgcgcgaccagagcgacccgcag
cacgtgttcctgcgccagcggctgcaggccctgcacacgggctgggccgagctgcacagc
atgtgggacaaccggcgcgcgctgctggccgcgtgccacgcgtacctcgccttcgcgcgc
gacgctcgccaggccgacggcgttctcagcaaccaggagtacgcgctgagccgcgtggag
atgccggcgacgctgcagtccgccgaggaagccatcaagaagcacgaggagctgaccacc
agcatggaggccaatgacgagaaggtcggcggcgtgctggacacggggaggaagctggtc
ggcgaggggaacttcaacgccgacaagatccaagagaagatggattccatcagcgagagg
cgtgagaagaaccaggcagcagcagcagacctcctgggccgtttgagggataaccgggac
ctacagaagttcctgcaagattgccaggagctgagcctgtggatgaacgagaagatgctg
acggcgcaggacatgtcgtacgacgaggccaggaacctccactccaagtggcagaagcac
caggccttcatggcggagctggcctccaacaaggagtggctggacaagatcaagaaggag
ggggagcaactgatccgggacaagccggagacagagggcatcgtgcaggagaagctctcg
gagctgggcaccgtgtgggaccacctggagagcaccacgcagctcaaggcccagcggctc
ttcgacgcgaaccgcgccgagctcttcacacagagctgcgccgacatcaacatgtggctc
gccgagctggagacacagatcacctccgaggaccacggcagcgacctcaccagcgtcaac
atcctgctcaagaagcagcagctgctggagaagcagatggaggtgcgcgagaaggaggtg
cgtgagctgcaggaccaggtgctcgtgctgcggcaggagcagctcaaggagggcgcgggc
ggcccgggggagggcggggaggaggaggtggacggcatgcgcgccagcgtggagggccgc
ttcaagcaggtgacgcagccgctggaggagcgccgcctcaagctgctggcgtccaaggag
gttcaccagttcacccgcgacctcgaggacgagatcctctgggtggaggagcggctgcct
ctggccacgtccacggatcacggcaacagcctgcagtcggtgcagctgctcgtccagaag
aaccagaatctgcagaaggagatggcggggcacgagccgcgcgtgcacgaggtgtgcgag
cgcggcgaggcgctggcggagcgcggcctgggcgagggcggcgccgaggcgggcgccgcg
gcgcgccgcctgggcgagctgcgggcgctgtggggccgcctgcgcgacgaggcgggggct
cggagcgcgcgcctccacgaggcccaccgcgcgcagcggtactacttcgacgtggcggag
gccgagtcgtggatgagcgagcaggagctctacatgatcgccgaggagaaagtgaaggat
gagcagagcgcactggctctggtgaagaagcacgccatcatggagcagggggtggaggat
tacgccaacgtcatccggcagctggctgagaccagtcgcagcctggtggcagactcgcac
cccgagagcgaccggatcctgctgcggcagtcgcaggcggacaagcagtacgccagcctc
aaggacctggcggaggagcggcgcgggaaactgtcggagaagcacggcctcttccagctg
agccgcgaggtggaggagctggagcagtggatcgccgagcgggaggtggtggcctcctcg
cacgagctgggccaggactacgagcacgtcaccctcctggaggagcggttcgcggagttt
gcgcgggagacggcggcgacgggccacgagcgcgtgagcggcgtcatggcggccgccgac
gtggtcatcgccggcggcaatgccgagtcggcggcggcggccgccgagtggaaggacacg
ttggccgagggctgggccgagctgctcgagctcatggagacgcgggcgcagatgctcgcc
gcctcgcgccggctgcacaggttcgtgcacgacgcgcgcgaggtgctggggcgcgtgcgc
gagaagcagcagctgctgcccgacgagctcgcgcgggacctcatctccgtggagagccag
cagagggcccacgccgccttcgagaccgacgtgcaggccttcggcacgcaggtgacggcg
ctccaggagtcggcgcgcggcctgcaggaatcgtacgcgggggacaaggcggaggagatc
cgccagagggagcgggaggccgtgagcgcctgggaggggctgctggcggcgtgcgccacg
cgccgccagctgctctccgacacgtgggagaagtgccgcttcttcagcgctgcccgcgac
ctcctgctgtggatggagggcatcgagaggcagatggaggctcaggagaagccaagggac
gtttcctctgccgagctgcacatcaccaaccaccagggcgtcaaggccgagatggacgcg
cgtaacgacagcttcgtcgccgtggtggagatggggcagtcgctgctcgaccgcgggcac
tacgcctccgacgagattgaggagaagctggagcagctgaaggacaagcagaagggcatg
gtcctgcactgggaggatcgcgctgagtggctcaagctcatgctggaggtgcaccagttt
gcgagggatgccggcgtggcggaggcctggctgctggcgcaggagccgcacgtcacgtgc
caggagtttggggagagcgcagacgaggtggacgagctgctcaagcggcaggaggccttc
gagaagtcggccggcacctgggaggagcgcatcgcgctgcttgagaggctgaccaccctg
gaggtccgcgagcacaagcggcgggaggcgcgcttggcggaggagaggcgccaggagcag
ctggagcgcgagcgccaggagaaggaggaggaggaggcggcgcggcgggcagcagagcag
gaggagagggaaaaagagttaatggaacagactgtgcagaatggtatcccgtctgatcaa
gagtccccgaaggccaacggagaggacgcgaaggaggcggacggcagcgccgtgccaacg
gccgcggacgaggtgcagcccgccacgctcaaggagggctccctgcaccgcaagcacgag
ctcgatgccaacgggaagaaggcctccagcaggtcctggaacacggtgttctgcaagctc
acggacctcggcctgggcttctacaaggacaacaagagcgccgccgcgggggctctgtac
cacaacgagccccccctgcccctcgccggcgccgcctgcgaggtggcctccgactacaag
aagaggaagcacgtcttcaaactgcagcttgcggacgggagtgaatacctgtttcaagcc
aaggacgacgacgagatgaacgcctggatccagagcatctgtgggaacgggatgggttcg
gggagcgcgagcggcgtggggatggggggcagcgtcagcgccagcgggctgcccagcggc
ggcggcggggacacggcgagcctcggcggtggtggtggggagccgcagcagccgcagcag
cagcagcagcagcagtcgcctgccgccgtggtgctgcgccgcaagccgacgtcgccgggt
tcggccgccagcgacacgacgagcccgagccgcaagagcgagaagcgcttcagcttcttc
gggaagaaaaagtaa
DBGET
integrated database retrieval system
