Lethenteron reissneri (Far Eastern brook lamprey): 133341280
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Entry
133341280 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: recQ-like DNA helicase BLM
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03440
Homologous recombination
lrj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133341280
03460 Fanconi anemia pathway
133341280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrj03032
]
133341280
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133341280
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133341280
DNA replication proteins [BR:
lrj03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133341280
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
133341280
Bloom's syndrome complex (BTR)
133341280
FA (Fanconi anemia) pathway
133341280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
RQC
BDHCT_assoc
BLM_N
ResIII
DUF5637
Motif
Other DBs
NCBI-GeneID:
133341280
NCBI-ProteinID:
XP_061405771
LinkDB
All DBs
Position
11:3099205..3125141
Genome browser
AA seq
1502 aa
AA seq
DB search
MNPLPQNNLEEQLRLHQNKLSRSRNAALTPPAAQPKAGFTFKKTGSGPAIPELSSALPKR
TFAPSSGVLIANKLPGSPTRRLPVGTNRGPQKLLQNSQQSRISTFLQRPDPKPSPSVQQT
AATLATASIATTSRVPNNDKPPSTGTRSPVQPAVTLPAPIPARQVAWVTPMGDRTCPISE
QKIESVVDDVTANARTDLDDANPDSDFDDFEMGPAHQQQRALNCSALRAVQPANGGGLVQ
ENVPATALCLSGTSNSIITVSDVAVDDGRINDDDDDIVVRRKRGRILIDDDDEDDDDYGD
ATVLVPEQPLLPGTDLQTGQTSPCFNGTPCEEMRYDPGVVELHELDFEDDSFEDEYVPPS
PSPPPVVSVSSLGHNATLPSSMPTEPGQLRTMLCDVSRSMCALLETVPHRAILSLPIPPA
DAHKLLSHLARGKAIIRKLDILETNPPHTISDAQDRRSSDVNVVNQDSNLTPNPGASSKS
TSSLRIKSNERNYYNDGDSDMNYDDDLNLPSLMTKAVAASAGRGDAVSHRAGNPGDVSKN
WSPFAISASYETPNATRGASHAPPAYVETPRGRPPPSCDRAREDAPDYDNLSDDYDFSEN
IAEKKDNDGGRFRNDVAFDIDDFNDDDESWAQQVADGDCVDGQEGFDCMTPKPIKEGPPL
RKSLSTGVHATPAQRCRITASSLREAQVLHEFQGTSFPHSAEMLKVFRHKFGLLRFRKNQ
LEAINAAMFNRDCFVLMPTGGGKSLCYQLPACLSPGVSVVVSPLRSLIVDQVQRLASLDI
PATHLSGDINDGDLASIYMQLAKKEPVVKLLYVTPEKLSCSTRLLSALDNLYQRQLLSRF
VIDEAHCVSQWGHDFRPDYKRLSELRRRFPTVPIMALTATATTRVQTDILHQLTMKAPLT
FIQSFNRDNLKYEVLPKKPKKVAEDCVQWIRSNYPRDSGIIYCLSRHECDTMAESLRRAG
LDALSYHAGLTDKQRDQSQQCWINQRGCKVICATIAFGMGIDKPDVRYVIHASLPKSIEG
YYQESGRAGRDGIVAKCVLFYGYGDVTRLRRIIFSTEREGGSRESKQMHMSNLHSMVHFC
ENISECRRLQLLAYFGEKGFDPGFCRKNPTVACDNCSSMQTFRLRDVTENVKTVVRFLQS
SSWGSRGGVATTRYTLNMLVDIFLGNKSARMTSGPMFGIGSSFSRHNAERLFRKLVLDGL
LHEELHITGNDQAVSYVGVGSRGNDLLAGTMLKVELQETESCSSSIRRSRAQVCGGSSTV
QVMAEQCAQELTELCRRLGDKHGIKYYNVFSTVTLRKIAESFSDDAEALLQIEGVTEDKM
QKYGTEVLKVMSKYTQWRLPGNSTNSTEGTWLDCSRPMEPGQSSGTSHVSPYVPPSPPPS
AGSSSAYFSSGRRGRAGKRKARGGGRSYKGNNYKRRRVSADGAEGSSYSSGGRGGQFRGR
GRAGARKRGSVKSGGGAVGFMDRSCTPPGRATGASWTGFSRKPGLMAMPTPRSARTTFPN
NK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccctgcctcagaataatctcgaggagcaactgcggctgcatcagaacaagctg
tcgcgttcccgcaatgccgctctcacgcctcccgcagcccagcccaaggctggattcaca
tttaaaaagacaggatccggcccagcaattccagaactgtccagtgcccttccaaagaga
acattcgctccctccagtggcgttctcattgcaaataaattgcctggcagtccgaccagg
agactgcctgtcggaaccaacaggggtccacaaaaactcctgcagaactcgcaacagagc
cgcattagcaccttcctgcagaggccagatccgaagccttctccctccgttcagcagacc
gcagcgaccttggcaacagcgtcgattgcaacaacttctcgggtgccgaacaacgacaag
cccccgtcgaccgggactcgctcgccggttcagcccgcggtcacgttgccggcgccgatt
ccggcgcgtcaagtggcatgggtgacacccatgggtgaccgtacatgcccgattagcgag
cagaagattgagagtgtggtggacgatgttacggcgaacgcacgaacagatcttgacgat
gcaaacccagactcggactttgatgacttcgaaatgggaccagcccaccagcaacagaga
gctctgaactgctctgccctgcgagcagtccaaccagctaatggcggaggtctcgttcaa
gagaacgttccagcaacagctctttgcctctcaggcacttccaacagcatcattactgtt
tcggacgtagccgttgatgacgggcgtattaacgacgatgatgatgacatcgtcgtaaga
agaaagcgtgggaggatcttaattgatgacgatgatgaggatgatgatgactatggcgat
gctacggtgttggttcctgagcaacctttacttcctgggaccgatttgcagactggccag
acgtctccatgctttaatggaactccgtgtgaagagatgagatacgacccgggtgttgtc
gaactccatgaacttgactttgaggacgactcatttgaggacgagtatgtgccgccatct
ccgtcgcccccaccagtcgtctctgtgagcagcctgggccacaacgcaactctgccctcc
agtatgcccacagagccagggcaactgcgtacaatgctgtgcgatgtgtcacgctcgatg
tgtgcgctgctggagactgtgccacaccgcgccatcctgagcctgcccatcccgcccgcc
gatgcccacaagctactctcgcacctcgccaggggcaaagccattatacggaagctggac
atattggaaaccaacccaccacatacgatttcagatgctcaagatcggagatcatcggac
gtgaatgtagtaaatcaagactcaaacctcaccccgaacccaggcgcgagctcaaaatca
acgagttctttgcgcataaaatcgaatgagcgcaattattataatgatggtgactctgac
atgaattacgatgatgatttaaatcttccatcgctcatgacgaaagctgtggccgctagt
gccggtcgtggtgacgctgtgagccacagggctggaaacccaggtgatgtcagcaaaaat
tggagtccctttgccatcagcgccagctacgagacacccaacgccacgcgaggggcttca
cacgcgcctcccgcatacgtggagaccccgcgggggcgacctccaccgtcgtgcgaccgc
gctcgcgaagacgcccccgactacgacaatctgagcgacgattacgacttttcggaaaat
atcgccgaaaagaaggacaacgatggcggacgcttccgaaacgacgttgcttttgacatc
gacgactttaacgacgatgatgaaagttgggcacagcaggtggcggatggtgattgcgta
gatgggcaagaaggctttgattgtatgacacccaagccaatcaaagaaggacccccactg
cgtaaaagcctgtctacgggcgtccatgccacgcctgcacagcgttgtcgaatcaccgca
agctcattgcgcgaagcgcaagttctgcacgagttccaagggacatcgttcccccactcc
gctgagatgctcaaggtgttccggcacaagtttggcctcctccgctttcgcaaaaaccaa
ctagaagctatcaacgcagccatgttcaaccgggactgctttgttctcatgcccaccgga
ggtggtaagagtctgtgttaccagctgcctgcgtgtctgtctccgggtgtcagcgtggtg
gtgtcaccgctgaggtctctcatcgtcgaccaagttcagcgtttggcatcacttgatatc
ccggcgactcacctctctggtgatatcaatgacggagacctggcttccatttacatgcag
ctcgccaagaaggagccagtggtcaagctcttatatgtgacaccagaaaagttgagctgt
agcacccgtctgctgtcggcgctcgataatctctaccagaggcagctgctgtcccgtttt
gtcatcgatgaggcccactgtgtgagccagtggggacacgacttccggccggactacaag
cggctgtcggagctgaggcgccgtttcccgacggttcccataatggcgctgacggccacg
gcgacgacacgtgtgcagaccgacatcctgcaccagctcaccatgaaggcgccactcacg
ttcatccagagtttcaacagggataacctgaagtacgaggttttgccaaagaagcccaag
aaggttgcggaagactgcgtgcagtggatacgcagcaactacccacgcgactcgggcatc
atctactgcctgtcgcggcacgagtgtgacaccatggccgagtccctacggcgggcgggg
ctggatgccctaagctaccacgctgggctcacggacaagcagcgtgaccagtcgcaacag
tgctggatcaaccagcgcgggtgcaaggtcatttgcgccaccatagcgtttggcatgggc
attgacaagccagacgtgcgctacgtcatccatgcgtccttgcccaagtccattgagggc
tactaccaggagtctgggcgcgcgggtcgcgacggcatcgtggccaagtgcgtgctcttc
tacggctacggggacgtcacgcgattgcgcagaatcatcttctcaacggagagggaaggt
ggttcgcgtgagagcaagcagatgcacatgagcaacctccacagcatggtccacttctgc
gagaacatctccgagtgccggcgcctgcagctgctcgcctactttggggagaaggggttc
gacccgggcttctgccggaagaaccccaccgtggcctgcgacaactgcagcagcatgcag
acgttccgcttacgcgacgtgacggagaacgtcaagacggtcgtgcgtttcctgcaatcg
tcgagctgggggagcagggggggcgtggcgacgacgcgctacacactcaacatgctcgtc
gacatcttcctaggcaacaagtcggcccgcatgacctcgggccccatgttcggtattggc
tccagcttctcgcgtcacaacgcagagcggctcttccgcaagctggtgctggacggcttg
ctgcacgaggagctgcacatcaccggcaacgaccaggcggtgtcgtacgtcggggtcgga
tcgcgtggcaacgacctgctcgctggaacgatgttgaaggtggagctgcaggagacggag
agctgcagcagcagcatacgccgcagccgcgcccaggtgtgcggaggctcctcgacggtg
caggtgatggcggagcagtgtgcgcaggagctcaccgagctgtgtcggcgcctcggggac
aagcacggcatcaagtactacaacgtcttcagcaccgtcacgctgcgcaagatcgcggaa
tctttctcggacgatgcggaggctctcctgcagatcgagggcgtcacggaagacaagatg
caaaagtatggcaccgaggtcttgaaggtcatgagcaagtacacacagtggcgcctccca
gggaacagcaccaactctaccgaaggaacgtggctggattgcagccgcccgatggaaccc
gggcagtcgtctggcacatcccacgtatcaccgtatgtccccccatcccctccgccatcg
gcgggatcgtcttccgcgtactttagctcggggcgccgtggcagggcgggcaagcgcaag
gcgagaggcggtggccggagttacaagggcaataactacaagcggcgtagagtctcggca
gacggcgcagagggcagcagttactcgagcggtggacgcggcggccaattccgcggcagg
ggccgggccggcgctcgcaagcgcggaagcgtcaagagcggcgggggtgcggtgggcttc
atggaccgctcttgcaccccccccgggcgcgcgacgggcgcaagctggaccggtttcagt
cgcaagccgggactcatggccatgcccacaccgcggagtgcgcgtaccaccttccccaac
aacaaatga
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integrated database retrieval system
