Lethenteron reissneri (Far Eastern brook lamprey): 133341320
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Entry
133341320 CDS
T09663
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133341320 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133341320 (PNPT1)
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133341320 (PNPT1)
Enzymes [BR:
lrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
133341320 (PNPT1)
Messenger RNA biogenesis [BR:
lrj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
133341320 (PNPT1)
Transfer RNA biogenesis [BR:
lrj03016
]
Prokaryotic type
tRNA degradation factors
133341320 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
133341320
NCBI-ProteinID:
XP_061405833
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All DBs
Position
11:complement(5352201..5374508)
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AA seq
815 aa
AA seq
DB search
MAAPCTRHAAALALGLRSLLLCARRYPRGPRLGWGGVRGGMGLGAGLGVGLSSAPASSRR
RWAHNSAWSASGVRGQAEVALGTRKLKISTGKLARFADGCAIVQLGETAVMVTAVSKAKA
ATVQFMPLVVDYKQKAAAAGRIPTNHLRRELGTTDLEILTSRVIDRSIRPLFPAGYFYDT
QVICNLLSVDGVNDPEVLAINGASAALALSDIPWDGPVGAVRVGIVNGDVVINPTRRELT
QSSLNMIVTGGVSSSVVMLEAAAEDVLQQDLCHAIKVGVKHTTQVVLAIQQLARQHGRAK
RTPQKLWVPRADMVERARQLASKEVYAIFTDYTHDKISRDEAVNKLRLETEEQLRASFTD
AEHYDIIEAFNVITKEVFRGLILNEYKRCDGRELSALRDIACEVDLYRPLHGSALFQRGQ
TQVLCSVTFDSMESALKTDRIAALGSGVKDRNFMLHYEFPPYATNEIGRVSGLNRRELGH
GALAEKGLRPVIPKDFPFTIRVTSDVLESNGSSSMASVCGGSLALMDAGVPISSAVAGVA
VGLVAKMDPENPRDISDYRLLTDILGIEDYFGDMDFKLAGTKKGITALQADIKLPGIPLK
VVMEAIQQATVAKSEILQIMNNTIAKPRPNRKESGPVVDTIQVPLSKRSRFVGPGGYNLN
RLQAETGVTISQLDEESYSVFAPTPDAMNEAREFIDNICKDDQEQRLEFGAVYTATIAEI
RDSGVMVKLYPNMTPVLLHNSQLDQRRIQHPSALNLEVGQQIQVKYFGRDPTDGRMRLSR
KVLMAMGSQTPAKTLGDRQSISMTGDRPLAMQADK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccctgtacccgccatgccgccgctctcgcgttgggcctcaggtcgctgctt
ctctgcgctcgccgctacccccgcgggccccgtctcggctggggcggcgtgcggggcggc
atgggcctcggcgcaggcctcggcgtaggcctcagctcggctcccgcgagcagccggcga
cgctgggcgcacaacagcgcgtggagtgcgagcggcgtcaggggccaggccgaggtggcg
cttggaactcggaagcttaagatctctacggggaagttggcgaggttcgcagatggatgc
gctatcgttcagctcggggaaacggcggtgatggtgacggctgtcagcaaggccaaggcg
gccacagtgcagttcatgccgctggtggtcgactacaagcagaaggccgcggctgctggg
agaatacccacaaaccacctccggcgagagctcgggaccaccgacttggagatcctgacg
agccgagtcatcgatcggtccatcaggcctctcttcccggctggatatttttacgacacg
caggttatttgcaacctcctgtcggtggacggggttaatgaccccgaagttctcgccatc
aatggagcatcagcagcgttggcactctctgacatcccgtgggatggacccgtgggtgcg
gtgcgcgtgggcatcgtgaacggagacgtggtcatcaacccaacacggcgtgagctgacc
cagagctcgctcaacatgatcgtcacgggtggggtcagcagctctgtggtgatgctggag
gccgcggccgaggacgtcctgcagcaagacctgtgccacgccatcaaggtcggcgtgaag
cacaccacacaggtggtgctcgccatccagcaactggcacgacagcacgggcgcgccaag
cgcacgccgcagaagctgtgggtgccccgcgccgacatggtggagagggccaggcagttg
gcatcaaaggaggtttacgcgatattcacagactacactcacgacaagatctcgagagac
gaggccgtcaacaaactccgcctggagaccgaggagcagctgcgtgcgtcgttcacggat
gctgagcattatgacatcatcgaggccttcaacgtgattaccaaggaggttttccgagga
cttattctcaacgaatacaagaggtgcgacggccgcgagctgtcggccctgcgcgacatc
gcgtgcgaggtcgacctctaccggcccctgcacggctcggcgctgttccagcgtggccag
acgcaggtcctgtgctcggtgacattcgactccatggagtcggcgctcaaaaccgaccgc
atcgctgcgctcggcagcggggtgaaggatagaaacttcatgcttcattacgagttccct
ccatacgccaccaacgagatcggccgagtgagcggactgaaccggagagagctgggccac
ggcgcgctggcggagaagggcctgcggcccgtcatccccaaggacttccccttcaccatc
cgtgtcacgtccgacgtgttggaatccaacggctcgtcctccatggcgtccgtgtgcgga
ggaagtctcgctctgatggacgctggcgtgccgatctctagcgctgtggcgggcgtggcc
gtgggtctggtggcgaagatggacccagagaatccgcgggacatctcggactaccgcctc
ctcaccgacatcctgggcattgaggactactttggggacatggacttcaagctcgcggga
accaagaagggaatcacggccctgcaggctgacattaagctgccaggaatacccttgaag
gtggtgatggaagccatccagcaagccacggtggcaaagtcggagattctgcaaatcatg
aacaacaccatcgccaagcccaggcccaaccgcaaagagagtggccccgttgtcgacaca
atccaggtgcccttgtccaagaggtcgaggttcgtggggcccggtgggtacaacctaaac
agactgcaggccgagacgggcgtcaccatcagccagctggacgaggagtcgtactccgtg
ttcgcgcccacgcccgacgccatgaacgaagcgcgcgagttcatcgacaacatctgcaag
gacgaccaggagcagcggctcgagtttggtgccgtctacacggcaaccatcgcggagatc
agggattccggtgtgatggtgaaactgtaccccaacatgactcccgtgcttctgcacaac
tcccagcttgaccagagacggatacagcatcccagtgcgctcaaccttgaggtgggacag
cagattcaggtaaagtattttgggagggacccaacggacggccgcatgcgtctctcacgc
aaggtgctcatggcgatgggctcccaaactcctgcgaagacgctcggagaccgccaatcc
atctccatgaccggagacaggcccctggccatgcaggctgacaagtag
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