Lethenteron reissneri (Far Eastern brook lamprey): 133341332
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Entry
133341332 CDS
T09663
Symbol
PARP1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03410
Base excision repair
lrj04210
Apoptosis
lrj04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133341332 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133341332 (PARP1)
04217 Necroptosis
133341332 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrj03032
]
133341332 (PARP1)
03036 Chromosome and associated proteins [BR:
lrj03036
]
133341332 (PARP1)
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133341332 (PARP1)
Enzymes [BR:
lrj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
133341332 (PARP1)
DNA replication proteins [BR:
lrj03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133341332 (PARP1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
133341332 (PARP1)
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133341332 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
WGR
PADR1_N
Zn_ribbon_PADR1
BRCT
BRCT_2
DUF5536
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
133341332
NCBI-ProteinID:
XP_061405854
LinkDB
All DBs
Position
11:5782720..5819778
Genome browser
AA seq
1025 aa
AA seq
DB search
MADKPFKAEYAKSSRASCKKCGGNIEKDCLRLAVMVQSPRFDGKVPQWHHFQCFWKRARP
LTQADVDGFSELRSADQDRIKKHIEGGADGEGKSSGKANGGGAAASNTLPDFVVEYAKSN
RSKCKGCDDKIEKDDVRISRKMINIEKPHLGMIDHWYHTNCFVEHRDQLGFLSTYGANQI
GGFTRLNANDKKAVEALLGTVVVVVDGKRKAEDQVDEVAKKIKLESMKQKEEEDKMLKKQ
SNVIWSFKDGLKSCSDEIDLKELLIANKQAVPSGESAVLERLADGMAFGALLPCAECKDG
QLVCMSDAYRCTGNISGWTKCTFSTKTPKRNEWIIPKEFKDVPFLKKYKYKQRERVFMSA
QATTSPPRAATVATATVATAATKSGEAPGTSAGAVPGKLLVGKALCLVGKLQKSRDDIKA
LVEKLGGKMTSTVSKADFCISTKKEVEKMSKKIAEAQTYNVCVVAEDLLAEDSGRPLAEL
VSAHRLSTWGASIKVEQEPTVKTEPVLEVPKEASAKSSKRKSEGQKAEANKLKLTVKGRA
AVDPLSNLVDVAHVLEDHGMIYGAAMSLVDVERGTNSYYKLQLLECDLNRKYWVFRSWGR
LGTTIGGTKLEKMKSREDAVEHFCQLYFDKTGNKWNTRNFVKYPNKFYPVETDYGQDDED
IHDLKAMAGTNSKLAKPIQELLRMIFDIDSMKRTMVEFEIDLCKMPLGKLSRKQIQSAYS
VLGDAQKLVSESGLTSLIQDLSNKFYTLIPHDFGMKKPTLLDNLDYIKMKVDMLDNLMDI
EVAYSLLNPKDETSGGKKDLLDASYEKLHTTIEVLGKDTEEFRVILEYVTNTHAHTHDAY
ELEVEEVFKVSRDGEFQRYRPFRELHNRQLLWHGSRMTNYAGIFSKGLRIAPKEAPVTGY
MFGKGVYFADMVSKSANYCHTSPSNPTGLILLAEVALGNMHELKQSESITKLPKGTHSVK
GVGKTAPDPKKTVTLNGVQVPIGNPAATGINDTSLLYNEYIVYDVAQVNIKYLLKLNFKY
KMQLW
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaacccttcaaggcggagtacgctaagagcagccgcgcttcgtgcaaaaaa
tgcggcggcaacattgagaaagactgcctgcgtctcgcagtcatggtgcagtcacccagg
tttgacggcaaggtgccacagtggcaccatttccagtgcttttggaagcgcgcgcggcct
ttgacgcaggccgatgtggacggcttcagcgagctgcgcagcgctgaccaggaccgcatc
aagaagcacatcgagggcggtgcggatggtgaagggaaaagcagtggcaaagcaaatgga
ggaggagcagcagcatcaaacaccctcccagattttgtggtggagtacgccaagtccaac
cgcagcaagtgcaagggctgtgatgacaagatcgagaaggacgacgtgcgtatctcacgg
aagatgatcaacattgagaagccgcacctgggcatgattgaccactggtaccacaccaac
tgtttcgtggaacatcgcgatcagctgggcttcctttcgacgtacggcgcaaatcagatc
ggtggcttcactcggctcaacgccaatgacaagaaggctgtcgaggccctgcttggcact
gttgtcgtcgtcgtcgatggaaaacgtaaagcagaggatcaggtagatgaggtggccaag
aagatcaagttggagtccatgaaacagaaggaagaggaagataagatgctaaagaagcag
agcaatgttatctggagcttcaaggatggcttgaagagttgcagcgatgagattgacctc
aaggagctgctgattgccaacaaacaggccgtgccatccggcgagtctgcggtgctggag
cgcctggctgacggaatggcgttcggtgcgcttctgccatgtgcagagtgtaaggacggg
cagctcgtgtgcatgagtgacgcttaccgctgcacggggaacatctccggctggaccaag
tgcacattcagcacaaagacacccaagcgcaatgagtggatcatcccaaaggagttcaag
gatgtgccattcctaaagaagtataagtacaagcagcgcgagcgcgtcttcatgtccgcc
caagctactaccagcccgccacgcgctgccaccgtcgccactgccaccgtcgccactgcc
gcaaccaaaagtggagaagcccccggaaccagcgctggcgcagtcccagggaaattattg
gtcggcaaggcgttgtgcttggtggggaagctgcagaagagtcgtgatgatatcaaggca
ctggtggagaaactgggaggcaagatgaccagcacagtctccaaggccgacttctgcatt
agcaccaagaaggaggtggagaagatgtcaaagaagattgcggaggctcagacgtacaac
gtatgcgtggtggcggaggatctgctcgcagaggactcggggcggcccttggctgagctg
gtgtcggcgcaccgcctctcgacctggggggcgtcaatcaaggttgagcaggagccaacg
gtgaagaccgagccagtgctggaggttcccaaggaggcgtcggctaagagcagcaaacga
aagtcggagggtcagaaggccgaggcgaataagctgaagctgactgtgaagggtcgtgct
gccgtggaccccttgtctaatttggtggatgtggcccacgtgctggaggatcatggcatg
atctacggcgccgcaatgagtctggtggatgttgagagaggaaccaactcgtactacaag
ctgcagctgctggagtgtgacctcaatcgaaaatactgggtgtttcgctcatggggccgc
ttgggcacgacgatcggtggcaccaagctggagaaaatgaagagccgtgaagacgcggtg
gagcacttctgccagctctacttcgacaagaccggcaacaaatggaacacccgcaacttc
gtcaagtaccccaataagttctacccggtggagacggactacgggcaggatgatgaggac
attcatgatctgaaggccatggcgggtaccaactcgaagctagcaaagccgattcaggaa
ctgctgcgcatgatcttcgacatagacagcatgaagaggaccatggtagagttcgagatc
gatctctgcaagatgcctcttggaaagttgagcaggaagcagatccagagcgcctacagc
gtgctgggggatgcacagaagctggtgtccgagagtggcctcacctcgctgatccaggac
ctgtccaacaagttctacaccctcatcccgcacgacttcggcatgaagaagcccacactc
ctggacaacctcgactatatcaagatgaaggtggacatgctcgacaacctgatggacatc
gaggtggcatacagtctcctgaaccccaaggacgagacgtcgggtggcaagaaagatttg
ctggatgcaagctacgaaaaactgcacaccactatagaggtgctgggtaaggacacggag
gagttccgagtgatcctggagtatgtcaccaacacgcacgcgcacacgcacgatgcctac
gagctcgaggtggaggaggtgttcaaggtgtcgcgggacggcgagttccagcgctaccgc
ccgttccgcgagcttcacaaccgccagcttctgtggcacggttcccgcatgacaaactac
gccggcatcttctccaagggcctccgcatcgcgcccaaggaggctccagtgacgggctac
atgttcggcaagggtgtctatttcgccgacatggtgtccaagagtgccaactactgccac
acaagccccagcaaccccaccggcctcatcctgctcgccgaagtcgccctcggcaacatg
catgagctgaagcaaagcgaatcgattaccaagctgccaaagggaacccacagtgtgaag
ggtgtgggtaagacggcgcctgacccgaagaagaccgtgactctcaacggcgtgcaggtg
cccattggcaatcctgccgcgacgggcatcaacgacaccagcctgctgtacaacgaatac
atcgtttacgacgtggctcaggtgaacatcaagtacctgctcaaactgaacttcaagtac
aagatgcagctgtggtag
DBGET
integrated database retrieval system
