Lethenteron reissneri (Far Eastern brook lamprey): 133341460
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Entry
133341460 CDS
T09663
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133341460
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133341460
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
133341460
NCBI-ProteinID:
XP_061406094
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Position
11:11928284..11995691
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AA seq
910 aa
AA seq
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MARACSGAAARRPGLQMVRKEKSRDAARSRRGKENFEFYELAKLLPLPGAITSQLDKASI
VRLTISYLKIRNFAAHGDPPWNLRSEGPPPNTSVKAIGVQRRRSPSALAQEVFEQHLGSH
VLQALDGFVFALTQDGRFLYISETVSIYLGLSQVEMTGSSVFEYVHPGDHAELAEHLGMR
LPPCRGAQPPTGGHAAGDGSSPTSSGPETPDTVEPVAPTMITAEQPLERSFFLRMKSTLT
KRGLHVKASGFKVIHVTGRLRVRLPLSHALPPSPTPLLGLVALAHALPPPTLSEVRVDCH
MFVTRLDLDLKIVYCENRVSEFMDMSPGELLGRSCYHFVHAEDVEAIRHCHVDLINKGQC
VTQYYRWMQRRGGYVWIQSLATVSINVKNAGGDKNIVWVNYLLSNHERGDCPMDLQQLPR
RGEADGVTGSSPRAAPGVVIAGERLQDEAEMRANLHADKNHASPGGGGTRRRSHVAAVPA
QGKDGRPTCAPARHNGRDRVTGEAAGGGRPVAPASGRAARGSLPGDSSEEEAGDSEPESA
PAALAAPPPVPAPLPSVKVEAGCDTRGPARVPSRRPVEADDDDGDDDGERDSDGDARSTA
SSGRCRPGRRRDRGARRAAPGRTRPPEDAPACKAIKTESSEPLNFDNDSSIWHFPPNREI
SRNESPFSMTARGAGAGDKADSPFPVSPGAGSTRSLTPVQSEPALSSPRDANGGGGGGGT
AGAAKPGTRAVPGLASFVYSAGEVEMLQRLQQHGNLVLPLAHGVAGPSAAHHHHPHHHPH
HPHHHPHHPHHHPHHPPRIYTTGTIRYAPADPSFTAQGGLLPANLAAGFGLDPKTSMEML
YHHVQRLGASPASFSAPGAAAGLAQLPGGAGVFSTPEGFFSTLPFHVYGNGVHAAPLPPL
PQPAAERKEN
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcgtgcagtggagcagcagcgaggcggccagggctgcagatggtccgcaag
gagaagtcgcgcgacgcggcgcgctcgcggcgcggcaaggagaacttcgagttctacgag
ctggccaagctgctgccgctgcccggcgccatcacgagccagcttgacaaggcttccatc
gtgcgcctcaccatcagctacctgaagatccgcaacttcgcggcccacggcgacccgccc
tggaacctccgcagcgaggggccgccgcccaacacctccgtcaaagcgatcggcgttcag
cggcgcaggagccccagcgcgctggcgcaggaggtgtttgagcagcacctggggagccac
gtcctgcaggcactggacggctttgtgttcgcgctcacgcaggacggccgcttcctctac
atctctgagacggtgtccatctacctgggcctctcacaggtggagatgacgggtagcagc
gtgttcgagtacgtgcacccgggcgaccacgccgagctcgccgagcacctgggcatgagg
ctgcccccctgtcggggtgcccagccccccacggggggccacgccgccggcgacggctcc
tcccccacctcgtccgggcccgagacccccgacaccgtggagcccgtggccccaacgatg
atcaccgccgagcagcccctcgagcgctccttcttcctgcgcatgaagtcgacgctcacc
aagcgcgggctgcacgtcaaggcctcgggcttcaaggtgatccacgtgacggggcggctg
cgggtgcggctgcccctgtcgcacgcgctgccaccgtcgcccacgccgctgctgggcctc
gtggcgctggcgcatgccctgccgccccccacgctgagcgaggtgcgcgtcgactgccac
atgttcgtcacgcgcctcgacctcgacctcaagatcgtctactgtgagaacagggtcagc
gagttcatggacatgtctcctggcgagctgctggggcgcagctgctaccacttcgtccac
gccgaggacgtggaggcgatccggcactgccacgtcgaccttatcaacaagggccagtgc
gtgacgcagtactaccgctggatgcagcggcgcggcggctacgtgtggatccagtcgctg
gccaccgtctccatcaacgtcaagaacgccggcggcgacaagaacatcgtctgggtcaac
tacctgctcagtaaccacgagcgcggcgactgccccatggacctgcagcagctgccgcgg
cgaggcgaggccgatggggtcacggggtcgtcgccccgcgccgctccaggggtcgttatt
gctggtgagaggctccaggacgaggctgagatgcgcgcgaacctccacgccgacaagaac
cacgcgagccctggcggcggcggcaccaggaggaggagccacgtggcggcggtgccggcg
cagggcaaggacgggcggccgacgtgcgccccggcacggcacaacggccgcgatcgcgtc
accggggaggccgccggcggggggcggcccgtggcgcccgcgagcggccgtgccgcccgc
ggctccctccccggcgactcgagcgaggaggaggcgggggactcggagccagagtcggcg
cccgcggccttggccgctccgccgcccgtccccgcgccgctccccagcgtcaaggtcgag
gccggctgcgacacgcggggcccggcgcgcgtcccgagccggaggcccgtcgaggccgac
gacgacgacggcgacgacgacggcgaaagggactcggacggcgacgcgaggtcgacggcg
tcgtctggccggtgccggcctggccgccggcgcgaccgcggggcgcggcgggcggccccg
gggaggactcgcccccccgaggatgcgccggcgtgcaaggccatcaagacggagagctcg
gagccactcaacttcgacaacgacagcagcatctggcacttccctcccaaccgcgagatc
tcgcgcaacgagtcgcccttcagcatgacggcgcgtggcgcgggggccggcgacaaggcg
gactcgcccttccccgtctcccccggcgccggctccacccgcagcctcacgcccgtgcag
tcagagccggcgctgtcttcgccgcgggacgcgaacggcggcggtggcggcggaggcacc
gccggagcggcgaagcccggcacgcgcgccgtcccgggcctcgcctcgttcgtctacagc
gccggcgaggtggagatgctgcagcggctgcagcagcatggcaacttggtgctgccgctg
gctcacggcgtggccggaccctcggcggcgcaccaccaccacccccaccaccacccgcac
cacccccaccaccacccgcaccacccccaccaccacccgcaccacccgccgcgcatctac
accacgggcaccatccgctacgcgccggccgacccgagcttcacggctcagggcggactc
ctcccagcgaatctggcggcgggtttcggcctggaccccaagacttcgatggagatgctc
taccaccacgtgcagaggctgggcgcgtcgcccgcctccttctcggcgccgggcgccgcc
gcggggctggcgcagctgcctggcggcgccggcgtcttctcgacgcccgagggcttcttt
tcgactctgccgttccacgtctacgggaacggcgtccacgccgcgccgctgccgccgctg
ccgcagccggcggccgagaggaaggagaactga
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