Lethenteron reissneri (Far Eastern brook lamprey): 133341807
Help
Entry
133341807 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133341807
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133341807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
133341807
NCBI-ProteinID:
XP_061406540
LinkDB
All DBs
Position
12:5490478..5513480
Genome browser
AA seq
1071 aa
AA seq
DB search
MSTFNLQRFRFEGRSPPQTRPRVPVDSDGTTKPRREAVTSVPDTPESERKGWKRQTLKSP
LKALHSNSNGEKNNRRPLASQLCKPKNTGQHHSAKGVHYSDSDSDGKDDAPDTTVTANCT
APKPNSVRYKLLKMREMFPQRTDDELLEVIKVTTTLDGAVASALLIFPPDTDSNRKRKPN
SQESTSMDSHTKFSQPSSKRMKKSGDSDSGRKGAQSLKDRNQMVSRLQAKFPDLDKEELR
EVLRQHGWSYENALISIQVFAGDGESDSDDEDIVEREMRVEKKEEKFEEAAVVHKVKPNS
VMAERARQKLAMFSRKPMSSASSKNFLSGPILQNGTAKNGSLSRGAAPDKANSKSVKGGS
RAKQPIKEACKPKAKLSTIRKMSSSSGSEDDDEKPMTTESDTDYDDVGDEDAVTDNDDCG
LSVKKRAKVLEFFCDATTEELILVQGCSHKKADLIVELRPFTSWDDLMRKLTTKKGLSEL
VWESNTVLKEREVVLRLMAGCSDVAGGLESCVNRLRRKELADDGKQHRMLRQPPILNPAC
KMKSYQLVGLNWLALLHEQDVNGILADEMGLGKTVQAISFLAHLVERGEKDPHVIVVPSS
TLDNWTRELEKWCPDLKVLLYSGSQEERRQLRTDILHKQVDFNVIVSTYQAAITNLDDRS
LFRRLPINCAVFDEGHMLKNMASQRYQHLMTINARRRLLLTGTPVQNNLLELMSLLNFVM
PRMFSNSTHEIRRMFASSKKHGQQQSKFQKERIHRAKQIMKPFILRRLKIDVLQHLPKKS
ERMELCPMSERQAPLYTQLVQRFKKTSDGVKRTELRNIMMQLRKMANHPLMHRHMYTDDK
IRQMSQLILKEPTHYDADPALVQEDMEVLNDLELHRLCLQYPSLASHSLPCSVVFGSGKL
QFLSTLLPALKSNGDRVVMFSQFTMILDILVQFLDYHGYSYVRMDGNTPVSERIGIIDRF
NEEPEIFVFLLSTRAGGLGLNLTSANTVILHDPDMNPHNDHQAEDRCHRVGQTRPVQVIR
LISAGTVEEAIVQSSKHKLQLQQDITVTNNKSRENELPAELASLLKQMLSQ
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctttaacctgcaaaggtttcgtttcgagggacggagccctcctcagacgagg
cctcgggttcccgtggactccgacgggactacgaagccacgccgagaggccgtgaccagc
gtacccgacacaccagagtcagagcgaaaaggctggaaacgtcaaaccttaaagagccct
ctgaaggcgttacattcgaactccaacggtgagaagaacaatcggagacccctggcatcc
cagctctgcaagcccaaaaatacaggccaacaccactcggccaagggagtacattactcc
gactctgacagcgatggaaaagacgatgccccggacaccactgtcacagcaaattgcacg
gctcccaagcccaacagcgtgcggtacaagctgctaaagatgagggagatgttccctcaa
cgcaccgacgacgagttgcttgaggtgatcaaggttacaactacactggatggagccgtg
gcatctgccctacttattttcccccctgataccgactcaaaccgcaagcgtaaacccaac
tcccaggagtctacctcaatggacagccacacaaagttttcacagccctccagcaagcgg
atgaagaagagtggtgattcagactcgggcagaaagggtgcacagtccttgaaggaccgg
aaccagatggttagtaggttgcaagccaagttccctgacctggacaaagaggaactgcgg
gaggtgctccgccaacatggctggtcatatgaaaatgccctaatttctattcaagtgttt
gctggtgatggggaatctgactctgacgatgaagacatagttgagagggagatgagagtt
gagaagaaagaagagaagtttgaagaggcagcagttgtccataaagtgaaacccaatagc
gtaatggcagagcgtgctcggcagaagctggccatgttttcacgcaagcccatgtcctct
gcctcctccaaaaacttcctgtcggggccaatcctacagaacggcactgccaagaacggc
agcctcagtagaggggcagcaccggacaaggccaattccaagtcggttaaaggaggcagc
cgggccaagcagcccatcaaggaggcttgcaaacccaaagcaaagctcagcaccattcgt
aaaatgtcttcctcctccggatcggaggatgatgacgaaaagccaatgactacggagagc
gacacggactacgacgacgtgggtgatgaggacgcggttaccgataacgacgactgtggt
ctcagcgttaagaagagggcaaaggtgctggaattcttctgcgatgcgaccactgaggag
ttgatactcgtgcaaggctgctcgcacaagaaagcggacctcattgtggagctgcggccc
ttcacgagctgggatgacctgatgaggaagctgacaaccaagaaggggctgtcggagctg
gtgtgggaatccaacacggtgctgaaggagcgcgaggtggtgctgcgtctcatggcgggg
tgcagcgatgtggctggtggactggagagctgcgtgaaccgccttcgcaggaaggagttg
gccgacgatggcaagcagcatcgtatgctgcggcagccccccatcctaaaccccgcatgc
aagatgaagtcctaccagctggttgggttaaactggctggcacttcttcatgagcaagat
gtgaatggaattttagctgatgaaatgggtttgggtaagaccgtgcaagccatctcattt
ctggcccacctggtagagcggggcgagaaagatccacatgtcatcgttgtaccatcatcg
acattggacaactggacaagagagctagagaagtggtgtcctgacctgaaggtgttgctt
tactccgggtcccaggaggagaggcgacaactccgcacagatatcctccacaagcaggtc
gacttcaacgtcattgtcagcacgtaccaggctgccatcaccaatttggatgaccggagc
ctgttccgccggttgcccataaactgtgccgtgtttgatgagggccacatgctcaagaac
atggcctctcagcgctaccagcacctcatgaccatcaacgcacgaaggcgactgttgctg
acgggtactccggtgcagaacaatctcctggaactcatgtctctactcaactttgtgatg
ccgcgcatgtttagcaacagcacgcatgagatccggcgcatgtttgcctcgtccaaaaaa
catggccaacagcagagcaagttccaaaaggagagaatccatcgggcgaagcagatcatg
aaaccgttcatcctccgccgactcaaaatagacgtgctgcaacatctgccgaagaagtct
gaacgaatggagctgtgcccgatgtcggaacgccaggctccgctgtacacacagcttgtg
cagcgctttaaaaaaaccagtgacggagttaagaggacagagctgcgcaacatcatgatg
cagctgaggaagatggctaatcacccgctgatgcaccgtcacatgtatacagacgataaa
attcggcagatgtcccagctcatcctcaaggagccgacccactacgatgcagacccggcg
ctggtgcaggaggacatggaggttctcaacgacctggagctccaccgtctgtgcctccag
tacccctctctggcttctcacagcctgccgtgttctgtcgtattcggctccggcaagctg
cagtttctctcaacgctattgcctgccctcaagagcaatggtgatcgcgtggtgatgttc
agccaattcaccatgattttagacatcctggtacagttcctggattatcacggttactct
tacgtgcgtatggatggcaacactccagtgtcagagcgcattgggatcatcgaccgcttc
aatgaggagcccgagatttttgtgttcctgctgtcaacgcgtgctggtggccttggcctc
aacctgacgtctgccaacaccgtgatcttgcacgaccccgacatgaacccccacaatgac
catcaggccgaggatcgctgccaccgcgtgggacagacacgcccggtgcaggtgatccgg
ctgatcagcgccggcacggtggaggaggccattgtgcaatcgtcgaagcacaaattgcaa
ctgcagcaggatataacggtcaccaacaacaagagcagagagaatgaattaccagcagag
cttgcttctctgctaaagcaaatgctgagccaatga
DBGET
integrated database retrieval system
