Lethenteron reissneri (Far Eastern brook lamprey): 133341827
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Entry
133341827 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrj01001
]
133341827
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133341827
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133341827
Protein kinases [BR:
lrj01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
133341827
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133341827
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_5
zf-RING_UBOX
YjcZ
PHD-1st_NSD
zf-C3HC4
VPS18_RING_C
UvrA_inter
CRLF3_N
Motif
Other DBs
NCBI-GeneID:
133341827
NCBI-ProteinID:
XP_061406584
LinkDB
All DBs
Position
2:complement(11061712..11094121)
Genome browser
AA seq
1241 aa
AA seq
DB search
MADGGSTGGALARGDGNSRASPAGDLAPNPAARAGDAEALAEREAAEERVSGDGGNGDAA
AATAAAAAAVAAAAASAIDGGGSSSGGRNSGDGDRTTKQSLPSLPPPPPPPPPPPPPVNL
LEACFVCRESLQSREPKLLPCLHSFCHACLPPPEERRLGVPTGPGAMNGGETRVQIAQVV
RCPVCQQEFRLVDVLDNYFVRDGPEQQPSATESTSQVCTSCEDNAEAAGFCVECVEWLCR
TCVEAHQRVKFTKDHTVRLKDDTADGLLGLSGQRPVLCPVHKQEQLKLFCETCDRLTCRD
CQLLEHKEHRYQFLEEAFQNQKTIIETFMAKLQEKRNYVQIAANQVQNRLNEVQESKRKV
EHDIKVAIYTLMNEINKKGKALLHQLEALTGERQSRLQAQHGEVMLLSRQVDHVMNFARW
ALTAHSNFALLYSKRLIFFQLRRVLRAPCDPTPALSGGVVRFYCDPNFWARNVLNLGTLV
MENPVTGPGRDGPQSYMTNQSAGSMAPPSAEGGAGSGGGAQPGQINLAQLRLQHMQHRLS
RLAASIRQPSSQHALQRPLTSVHMVNQQPIILQYHSAQPPRLVTLPPTSRGPPCGPLPNP
LQQLQQFSTGSIPGGSAPSHSSQQGVPPQLMRQHSVAGGGPGPPGGSHLSMGLSSIPSVT
NPENLPTVPDIPPIQLDEFGGMLLMRDGPPPGHLSHGATAAPPAHLSSPGSSSQSPHPPP
VQSPNLGASHLHGAVNSTSHMAPVRPSSASSNGSRASAMGDPLDHISIVKVEQVYVKQEP
GTTASHGNACRHSSPPPPPPPPQQQSHSSGRSRTAGGSTKTTTTTKVRIKPEGSTPSKRR
SCMLGSRGSSLTPPTSNPGSAEGAGGVTSGSTGRGGTGGGGEANASADDDDPNEDWCGVC
QNGGDLLCCERCPKVFHLSCHVPALLSFPTGEWLCAFCRSVGNPEMEYDSEDQQHGLDGK
RKTLLPSPGLSGPDQRKCERLLLHLFCHELSAAFHEPVSHSVPSYYKTIRKPMDLSTIKL
KLQKKHMDHYHTPAEFVSDVRLIFKNCAKFNEPDSEVGRAGLSVLSFFEETLSRLYPQLC
VPTTPAAVFGADGPPTSSASSSALTTAVTQPPSPPLPPSLLWLSSSPPPPLPLPPTPLRS
ASSSSSSPPRPSSVPSPNPASATSSSVPTFAAAAAAAVPLGGGGPGGKKKGGRRKLNNND
DDYHDDGEIETSDEDFEPRRKKRAGRGDEKPVHISESATTL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgggagtaccggcggcgctttggcgcgcggcgacggcaactcccgcgcc
tcccccgccggggacctcgcgccaaatcccgcagcccgagcaggagacgccgaggctctc
gcggagcgcgaggccgcagaggagcgagtaagcggcgatggcggtaacggcgacgccgcc
gccgccaccgccgccgccgctgccgccgtcgccgccgcggccgcatctgcgatcgacggc
ggcggcagcagcagcggcggtcgtaacagcggcgacggcgatcggaccaccaaacaatcg
ctaccttccctgcctccgccgccgccgcctcctcctccacctccgccgccggtgaacctg
ctggaggcgtgcttcgtgtgccgcgagagccttcagagccgcgagcccaagctgctgccg
tgcctgcactcgttctgccacgcgtgcctccccccgccagaggagaggcggctcggggtg
ccgacgggccccggagcgatgaacggcggcgagacccgcgtccagattgcccaagtggtt
cgttgccccgtgtgtcaacaagagttccgcctggtggatgtcctcgataactactttgtg
cgcgacggcccagagcagcagcccagcgcgaccgagagcacaagccaggtgtgcacgagc
tgcgaggataacgcagaggcagctggcttctgcgtggagtgcgtggagtggctgtgccgc
acgtgcgtggaggcgcaccagcgcgtcaagttcaccaaagaccacaccgttcgccttaag
gacgacaccgccgacggtttgctgggcctgtcgggccagcgccccgtgttgtgtcccgtg
cacaagcaggagcagctgaagctgttctgcgagacgtgcgaccgcctcacctgccgcgac
tgccagctgctggagcacaaggagcacaggtaccagtttctggaagaagcctttcagaac
cagaagaccatcattgagacctttatggccaagctgcaagagaagaggaattacgtccaa
atcgccgccaaccaagtgcagaaccggttgaacgaggtgcaggagagcaagaggaaggtg
gagcacgacatcaaggtggcgatctacacgctcatgaacgagatcaacaagaagggcaag
gccctactgcatcagctcgaggccctgacgggggagcggcagtctcggctgcaggcgcag
cacggggaggtgatgctgctgtcccgccaggtcgaccacgtcatgaacttcgcgcgctgg
gccctgacggcgcacagcaacttcgctctgctctacagcaagagactgatcttcttccag
ctgcgccgcgtgctgcgagcaccttgcgatcccacgccggcgctgagcggcggcgtcgtc
aggttttactgcgaccccaacttctgggcacgcaacgtcctcaacctgggaacactggtg
atggagaaccctgtgactgggcccgggagggatggaccccaatcttacatgaccaatcaa
agtgcggggagcatggctccaccctcggcagagggtggagccggcagtggcggtggggca
cagccaggccaaatcaacctggcgcagctccgcctgcagcacatgcagcaccgcctgagc
cgcctggccgcctccatcaggcagccgtcctcccagcatgcactgcaacgaccgctcacc
tccgtccacatggtcaaccaacagccaatcatcctgcaatatcatagtgcacagcccccc
aggctggtcaccctgccccccacttcacgggggcccccctgcggacccctacccaacccg
ctgcagcagctgcagcaattctccacgggatccattcccggggggtcagcgccatcccac
tccagccagcaaggggtacccccccaactcatgcggcagcactctgtggcgggtggggga
cctggacccccgggtggctcccacctctccatgggtctctcatcaatcccgtccgtcact
aacccagaaaacctacccacggtacccgacatccctcccatacagctggacgagtttggc
ggcatgctgctgatgcgagacgggcccccccccggccacctgtcccacggcgccacggcc
gccccccccgcccacctctcctccccggggtcaagctcgcagtcgccccatcctccgccg
gtgcagtcgcccaacctgggtgcatcgcacctgcacggggccgtcaactccacgtctcac
atggctcccgttcgaccctcaagtgcctccagtaacggcagccgagccagtgccatgggc
gatccgctggaccacatttccatcgtgaaggtggagcaggtctacgtgaagcaggagccc
ggcaccaccgccagccacggcaacgcctgccgccactcctccccaccgccgccaccaccg
ccgccgcagcagcagtcgcacagcagcggcagaagcagaactgcaggtggctcgacaaaa
acaacaaccaccaccaaagtgcgcatcaagccggaaggcagcacgcccagcaagcggcgc
tcctgcatgctcggttctcgcgggtcaagcctcacgcccccgacctctaaccccggctct
gctgagggggctgggggagtgacgagcggcagcacaggaagagggggaacaggcggcggg
ggcgaggcaaatgcctcggcggacgacgacgacccgaacgaggactggtgcggtgtgtgt
cagaacggaggagacctcctctgctgcgagcggtgccccaaggtcttccacctgagctgc
cacgtgccggccctgctctcgttccccaccggggaatggctgtgcgctttctgccggagc
gtggggaatccagagatggagtacgacagcgaggatcagcagcatgggctggacgggaag
cgcaagaccctgctgccctctccggggctctccgggcccgaccagcgtaaatgtgagcgg
ctgcttttgcacctgttctgccacgagctgagtgcggcatttcacgagcccgtcagccac
tcggtgcctagctactataagacgatccgcaagcccatggacctgtcgaccatcaagctg
aagctgcagaagaagcacatggatcactaccacactcccgccgagttcgtgagcgacgtg
cggctcatcttcaagaactgcgccaagttcaacgagcctgactcggaggtgggccgtgcg
ggcctgtccgtcctgtccttcttcgaggagacgctctcccggctttacccgcagctgtgc
gtgcccaccacgccggcggccgtgttcggcgcagacggccctcccacctcgtcggcgtca
tcgtcggcgttgacgacggcggtgacgcagccaccgtcgccgccgctgccgccgtcgttg
ctgtggctgtcgtcgtctccgccgccgccgctgccgctgccacccacgcctcttcgctcg
gcctcgtcctcttcctcgtcgcctccacggccgtcgtcggtgccgtcgccgaacccggcc
agcgccacctcctcctccgtgccgaccttcgccgccgccgccgccgccgccgtccccctc
ggtggaggagggccgggagggaagaagaagggcggacgacggaagctgaacaacaatgac
gatgactatcacgacgacggggaaatcgagacgtctgacgaggactttgagcctcggcgg
aagaagcgtgcggggcgcggggatgagaagccggttcacatcagtgagtcggccacaacg
ctgtga
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