Lethenteron reissneri (Far Eastern brook lamprey): 133341870
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Entry
133341870 CDS
T09663
Symbol
GAPVD1
Name
(RefSeq) LOW QUALITY PROTEIN: GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133341870 (GAPVD1)
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133341870 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
133341870
NCBI-ProteinID:
XP_061406650
LinkDB
All DBs
Position
12:8971326..9041740
Genome browser
AA seq
1741 aa
AA seq
DB search
MMKPDISTLSQQLKQERLYVSSERQILQRLNADVLKTAERLYHTAWIGKQQRINLDRLIL
TSADASPTECCQRAKVLEDTQFVEGYRRLGSHEGMYGELVARLREAPRLVASCLVCGERL
GLEGTTTVLQVVYTALYGNGITPQDEAYLLQVLRYLMEFSLKQSDSPRRLLRRATCSFSL
LFRLLSDGLAAAKIFLTAALREPILRLLVEDQDRLETDPAKLLDRLEIHTQERLFGPRGT
DEFRARVLEAVEVNVTRLVALVNRFASSLRRSTHCFPTVLRWVASQAYVTLARAEGLSPG
EARAVCTDLLLACFICPALVNPEQYGVITDAPINEVARFNLMQVGQVLQQLAMLGCEDSD
SRMKNIVSRFDRSCVSSFVDVIIGARVLESPPLSSYNLMEGLSRTTVFITAGQLQGMIGF
LHAVLAANSLADDDRAWLESLLARLPSQPPLGAGGGTSSGGSSHALCSQGCTPSATPHVS
PATTPSSKKNLLQIAAGRSLGRLSVAGGQQPQDCDGDAASGDGYPEELPEEVLVLSLGAS
CSDVLPGFMSENEVLSLQVVGGSQGDGGGDEGKLEAEGKPDKTLRFSLCSDNLEGVSEAG
LNSGVFACAYPDPSGPSNRSNSVSSLDLEAESVSELGAGASANSDAAALHLLEHEQATTQ
DNLDDKLRKFEIRDMMGLGDDRDISETVSETWSTDVVGSDFDPNPDEDRLQEIAGTAADS
MLGNLLGLPGSGLLERCTGSAMSETTSEAWSVEVLASDSEVTELKQEERLQELESCSGLG
SVSDDTDVREVSSRPSTPGLSVVSGISATSEDNPNKTEDLRSECDSDFGGKDSMTSPETE
EAGRGPQQLTSSSSQIESILSIFDPLNLADGPPVVRPRIQVSRPEHPSPSEPFLADAAGN
AGGGDGQPGHGGQHQTAPGGFCDAPSAAAASGGAAGDYGGFVPPPLQPSQQVQQQQQQQQ
QQQQQQQQPYQFTPSQVHFSPQLHGGSGQTQVHFQSQHNQQGDGDAAAAAQAAMPHPAAP
SPPQHHHHHYQQQQQAAVVAAQRPFGWKSAFERPQTVRERFTQFVRPRSSEATGVTPGRD
GYPRSTTGLGAPLGQGLASAARRAPGGEDAVGPSLSWSRRPVNSSEEGALHHAWTKRTTF
AGDEAMLAASSSNWGIRRGGGGGGGGASGGGGGREELGRELPLGSEARNSVAEPSGPGVG
SASGSSSGSAGTGGHMAGLLPSESPHDDGGHFAAVSDQPDDRKDSDDEKSDKSKPWWKKK
LSAIQKGPISFKKRDRQDREREDGIMENRFQAIPDEAMQALPVVGPQTFAADDILDKYRS
AIKRASPSEEQHNEAAADGDIFQESPRDEGALSLSADDLPDSASQTALPRHSSFTFRDAK
KKLRLALCSADIMAFPLLSAPAVRNGPFPAAEHLDPEDNEIVCFLKVQLAEAIHLQDKSQ
IAQLQETLRCVARFDNRTCRKLLAAIDDDYRRRAPYIAYLTRCRQGLQATQAHLERTLQR
VQRDKDISTRYFTAVCVRLFLERREDRVLAFIDEFKGLTASDEKTAVVSDFLQSLYGAMA
QDVIWQHASEEQLQDAQVAIERSIMSRIFRLAFYPNQDGDIMRDQLFHEHIQRLCRVVSA
NHRALLIPEVYLKEAPWPSAQAEVRTISAYKTPRDKVQCILRTCSTIMNLLSLANEDSVP
GADDFVPVLVYVVIKANPPCMLSTVQYINNFYEKRLSGEEQYWWMQFTAAIEFIKTIDDR
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagccggacatcagcacgctgtcgcagcagctgaagcaggagcggctctacgta
agctccgagcgacagatcctgcagcgtctcaatgccgacgttctcaagactgccgagcgc
ctctaccacacggcgtggatcggcaagcagcaacgcatcaacctcgaccgcctcatcctc
accagtgcggatgcatctccgaccgagtgctgccagcgtgccaaggtgctggaggacacg
cagtttgtggagggctaccggcggctgggctcgcacgaggggatgtacggcgagctcgtg
gcgcgtctgcgcgaggccccacgcctcgtcgcctcgtgcctcgtgtgcggcgagcggctc
ggcctagagggcaccacgacggtgctgcaggtcgtgtacaccgcactctacggcaacggc
atcaccccgcaggacgaggcctacctgctgcaggtcctgcgctacctcatggagttctcg
ctcaagcagagcgactccccgcgccgcctcctccgccgtgccacctgctccttcagcctg
ctcttccgcctgctctcggatggcctggccgccgccaagatcttcctgacggcggcgctg
cgcgagcccatcctgcgtttgctcgtcgaagaccaagaccggctcgagaccgacccggcc
aagcttctcgaccgcctcgagatccacacgcaggagcgcctgtttgggccgcgcggcact
gacgagttccgggcgcgcgtgctggaggccgtggaggtgaacgtgacgcggctggtggcg
ctggtgaaccgctttgcgtccagcctgcgccgcagcacgcactgcttccccaccgtgctg
cgctgggtcgcctcgcaggcgtacgtgacgctggcacgcgcggaaggcctgagccccggc
gaggctcgggccgtgtgcacggacctgctgctcgcctgcttcatctgtccggccctggtg
aaccccgagcagtacggcgtcatcaccgatgcccccatcaacgaggtggccagattcaac
ctcatgcaggtggggcaggttttgcagcagctggccatgctggggtgtgaggatagcgac
tcgcgcatgaagaacatcgtcagcaggtttgaccggagttgtgtgtcgtccttcgtggac
gtgatcattggagcgcgggtgctggaatctcctccgctgtccagctacaatctcatggag
ggtctgagcaggaccactgtgttcatcacggcggggcagctgcagggcatgatcggcttc
ctgcacgccgtgctggccgcgaactcgctggcggacgacgaccgcgcgtggctggagagc
ctgctcgcgcgcctcccttcccagccgccacttggtgccggcggaggcacaagcagcgga
ggcagcagccatgccctgtgcagccaggggtgcacaccgtctgccacgccgcacgtctcg
cccgccaccacgccctccagcaagaagaacctgctgcagatcgccgctggccgcagtctt
ggccggctgtccgtcgcgggggggcagcagccccaggactgcgacggcgacgcggcgtcg
ggtgacggctaccccgaggagctcccggaggaggtgctggtgctctcgctgggcgccagt
tgctcggacgtgctgcctggcttcatgtcagaaaatgaggtgctgtccctgcaggtggtt
ggcgggagccagggcgacggcggcggggacgagggtaaactggaagccgagggcaaaccc
gacaagactctgcgcttctcgctgtgctccgacaacctggagggcgtttccgaagcaggc
cttaactcgggcgtgttcgcgtgcgcatacccggacccctcagggccgtcgaaccgctcc
aactcggtgtcgtctctcgacctggaggccgagtccgtgtcggagctgggagccggcgct
tcggccaacagcgacgcggctgctctgcatctcctcgagcatgagcaagccacgacgcag
gacaacctggacgacaagctgcgcaagtttgagatccgcgacatgatggggctcggagac
gaccgcgacatctcggagacggtgagcgagacgtggagcactgacgtggtgggcagcgac
ttcgacccgaacccggacgaggatcggctccaagagatcgccggcacggcagccgacagc
atgctcgggaacctgctggggctgcccggctcggggctgctggagcgctgcacgggatct
gccatgtcggagacgaccagcgaggcgtggagcgtcgaggtgctcgccagcgactcggag
gtgacagagctgaaacaggaggagcggctgcaggagctggagagctgttctggcctgggc
tcggtgtcagatgacacagatgtgcgggaggtcagctccaggcccagcactcctggcctc
agcgtcgtctcgggcatcagtgccacctcggaggacaaccccaacaagacggaggacctg
cgctcggagtgcgactcggacttcgggggaaaagactcgatgacgagccccgagactgag
gaggctgggcgcggtcctcagcagctgacctcctcttcatcgcaaatcgagtccatcctc
tccatatttgatccgctcaacctggcagatggaccacccgtggtgcggcccaggatccag
gtgtcgcgcccggaacacccgtccccgtccgagccattcctcgcggatgcagccggcaac
gccggcgggggcgacgggcaacccgggcacgggggacagcaccagactgcgcccggcggt
ttctgcgacgctccttccgccgccgccgcctctggtggggcagcgggcgattacggtggc
ttcgtgccaccgccactgcaaccgtcgcagcaggtgcagcagcagcagcaacagcagcag
cagcagcaacaacaacagcaacagccctaccagttcacgccatcgcaggtgcacttctcc
ccccagctgcacggtggctcgggacagacgcaagtccacttccagtcgcagcataaccag
cagggcgacggggatgcggctgcagctgcgcaggcggcgatgcctcaccccgcggcgcca
tcgccaccccagcatcaccatcaccactaccagcagcagcagcaggcggcggtggttgcg
gcgcaaaggccgttcgggtggaagtcggcgttcgagcggccgcagaccgtgcgggaacgc
ttcacgcagttcgtgcggccgcgcagctcggaggcgacaggcgtgactcctggccgcgac
ggctacccgcggagcacgacaggtctgggagcgcctctgggccagggattggccagcgcg
gctcggagggccccgggtggcgaggacgcggttgggccctctctgagttggtcacgaagg
cccgtcaactcctcggaggagggcgcccttcaccacgcctggaccaagcgcaccactttc
gccggcgacgaggccatgttggctgcctcttcctcgaactggggcatccgccgtggcggt
ggcggcggtggcggtggagcgagcggtggcggcggtggccgggaagagctgggtcgagag
ctccctctcggctccgaggctcgcaacagcgtggccgagccgtccggcccgggcgtcggc
tctgcgtccggttcgtcgtccgggtcggcaggcacgggaggtcacatggccggcttgttg
ccctccgagtcaccgcacgacgacggggggcatttcgcggctgtttcggaccagcccgat
gacagaaaggacagtgatgatgagaagtccgacaaaagcaagccgtggtggaaaaagaag
ctgtcggccatccagaaaggccccatcagcttcaagaagagagaccggcaggaccgggag
cgggaggacgggatcatggagaacaggtttcaggccattccagacgaggcaatgcaggcc
ctcccagtggtgggcccgcagacgttcgccgctgatgacatcctggacaagtaccgcagc
gcaatcaagcgggcgagtcccagcgaggagcagcacaacgaggcagcggcggacggggac
attttccaagagtctccccgtgacgagggtgcgcttagcctctcggccgacgacctccca
gactcggcgagccagacggccctccctcggcactcctccttcaccttcagagatgccaag
aagaagttgcgtctggcgctgtgctcggccgacatcatggcctttccgctgctgtcggcg
cccgctgtgcgcaacggccccttcccggccgccgagcacttggaccccgaagacaacgag
atcgtgtgcttcctgaaggtgcagctcgccgaggccatccacctgcaggacaagagccag
atcgcgcagctgcaggagacgctgcgctgcgtcgcgcgcttcgacaaccgcacctgccgc
aagctgctggctgccatcgacgacgactacaggcggcgggcgccgtacatcgcgtacctg
acgcgctgccgccagggcctgcaggcgacgcaggcgcacctggagcgcacgctgcagcgc
gtgcagcgcgacaaggacatctccacgcgctacttcactgccgtgtgcgtgcgcctcttc
ctggagcggcgcgaagaccgcgtgcttgccttcatcgatgagttcaagggtctgacggca
tcggacgagaagacggcggtggtgtcggacttcctgcagtcgctgtacggcgccatggcg
caggacgtgatctggcagcacgcgagcgaggagcagctgcaggacgcgcaggtggccatc
gagcgcagcatcatgagccgcatcttccgcctcgccttctaccccaaccaggacggcgac
atcatgcgcgaccagctcttccatgaacacatccagaggctgtgccgtgtggtgtcggcc
aaccacagggcactgctcatcccggaggtttatttgaaggaggctccttggccgtccgct
caagctgaagtccgcaccatcagtgcctacaagactcccagagacaaggtgcagtgcatc
ttgcgcacgtgctcgaccatcatgaacctgctgagtctcgccaacgaagactcggtgccg
ggagcagacgacttcgtcccggtgttggtctacgtcgtcatcaaggccaatccaccgtgc
atgctgtccacggtgcagtacatcaacaacttctacgagaagcgactgagcggggaggag
cagtactggtggatgcagttcaccgccgccatcgagttcatcaagaccatcgacgaccgc
aagtga
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integrated database retrieval system
