Lethenteron reissneri (Far Eastern brook lamprey): 133341926
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Entry
133341926 CDS
T09663
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133341926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_DL_JAG
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
133341926
NCBI-ProteinID:
XP_061406749
LinkDB
All DBs
Position
12:13729235..13836777
Genome browser
AA seq
2534 aa
AA seq
DB search
MEPRALLPLLLLLLALGARLSRGLQCQDSNQPCINGGTCETFSNGTGICKCQRNFVGIYC
QLDNRCASSPCQNGGTCSTVVRGGVPDYACECPLGFMDPVCLTPADNACLGVPCHNGGTC
RLLSLHRFECHCLLGWSGKTCEKADPCASNPCAHGGACRAVGSRYACACRPGFSGPMCRA
DVDECAARPCHNGGSCANVPGSYACACPAAYTGRHCETAYVPCAPSPCLNGGTCRQTGDT
AYDCSCLPGFEGRDCDVNVDDCPGNRCDNGATCVDGVNTYNCQCSPQWTGQYCTEDVDEC
QLQPNACLNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCAIAACFNGATCHDRVASFFC
QCPLGKTGLLCHLDDACVSDPCHEGAICDTNPINGKAICTCRAGFTGGACNQDVDECSIG
ANPCEHGGRCINTQGSFRCQCTAGFTGPRCETDINECNSMPCLNDATCLDKIGEFTCICM
PGFEGRHCEIDINECQSGPCLNDGNCTDHVNGFLCRCPPGFTGPMCQIDMDECASTPCLN
GAKCVDQPNAYLCECTEGFAGLVCELNVNECQPDPCHHGKCVDGIASFYCVCSPGYTGFL
CDSQLNECQSSPCQNGGKCVDLVNRYHCQCPEGTEGVNCETNFDDCAGDPCQRGKCVDGV
NEYRCLCDAGYTGLQCDVELNECESSPCHNDGSCKDLVDAFECVCLPGFHGPLCYSETDA
CYASPCLHGTCLDHGESYRCACEAGWTGPLCEVDIDECESSPCQNGGACQEHLDGYTCRC
RDGFKGPTCQKNVNECVSNPCLNRGTCVDGVAGYTCLCTLPFTGRNCEAVMAPCASQPCH
NAATCKESVNLSSFSCACPPGWRGATCSLDIDECAGVPCQHGGACMNTQGGFRCSCRPGY
TGPTCQTDIDDCSPNPCQNGGSCTDSIGAFSCKCRPGFRGSRCETEVNECASNPCRNGGS
CADYVNSYTCRCRPGFNGIHCEHDITECTDSSCLNGGSCVDGINAYTCLCRGGFTGSYCQ
FDIDECESQPCQHGGTCLDGLGTYKCTCPRGYTGGNCQALVDWCSSSPCKNSGSCVQSRT
SYRCDCHSGWTGLYCDIPNMSCDTAARNKGLSVSHLCRHGGRCIDAGNTHHCQCSRGFEG
SYCEKEVDECTSNPCHNGATCRNFLGSYKCECPVGYHGLNCDYEINECLSQPCQNGGKCI
DLVNRFNCVCPPGTQGILCEINTDDCNPGPDAPMPGPRCFNGGSCVDGVGSFTCSCPPGF
VGERCEGDVNECLSNPCDPRGSLDCIQLVNDYKCQCRPGFTGHNCEVVINTCRLEPCRNS
GTCMITVNTPLGFTCLCAPGYAGHACEDNAYTCGNLSCRNGGTCLLDRAAGPLCVCPRAW
RGPECQYHSGGGGGSSACASSPCENGAACYEEVRPPFYRCVCPPLFTGPRCRVLGPKVPG
DASSGRALPVPPPVLEESCPVAECESHAGDGLCDRDCNNHACAWDGGDCSLHFPSPWRNC
SIRLQCWLRFRNGECDEQCNSLGCLFDGFDCQLGMKNCNPLYNAYCTAHYADQHCDQGCN
SDECGWDGGDCAGEVPERLADGVLVLIVLLPPARVHNDSANFLRQLGSLLHATARFKKDT
NGQDMIFPYYGDEARGGVGPRLERASRSLPRFVREMERPLIGSKVYVEIDNRHCYQTSDR
CFSSAADAAAFLAAQATHGSLPLPLLGVSSEVPDVTAPRVQVYVLLGLVLLVLMVVVLLG
VLVGRKRRREQGTLWFPEGFILGPPSDKKKRREPVGQDDVGMKTLSQSSVEDSLIDGNQN
EAWLDGSVPSTKRRKLEEQGMLPEAEEPVDHRPWTQQHLEAADIRTAPALALALTPPQGE
ADDGMDVNVRGPNGFTPLMVASFHGGGLDSSLCDEEESSDGLFEDGADDGSANVITDLIC
QGAALHAQTDRTGETALHLAARYARSDAAKRLLDAGADANLPDNMGRSPLHAAVSADAQG
VFQILIRNRATDVDARMHDGTTPLILAARLAVEGMAEELINCHADVNKVDDLGKSALHWA
AAVNNVEATLVLLKNGANKDMQDNKEETPLFLAAREGSYETAKLLLDHFASRDITDHVDR
LPRDIAQERLHHDIVRLLDEYNVVRNPSGPNGLVSPPQANGAYAHGAKAGKKGVRRPGNK
SGVAHDAAKCKKAQKKVNGGIASGGGGDGAPLLGLDGSASLSPVNSESSQSDATSPSLLT
SPHAAHSLYASMEAVGCGPPRVGHPMAFRNGAIAVASGWINPMQNVPLSQFAHQGHSLGL
TSSHPQSNHRAMMSPLHPAMINSQHHQMLAFQQNLYSPRNKPLMEAPQHHPEQARGGAFF
QSKMPMMQPQSNLQAASQQSQLLASISQGNMFPSLQQQHQQHQGIAVPMQSFVGSEFGES
FTANDYKPNEMSRSQTSCVLTQTVLPPQEANPSAQSSQLAKHEGAAPAEQFPTPPSQHSR
GEGSPGHAPPPGTPGEHPYLTPSPETPERWSTCSPRSGASDWSDGVSSPPGLAARAQRRP
ADPQQQLHNLQALM
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atggagccccgcgcgctgctgccgcttcttctacttctactcgcgctcggcgcccggctc
agccgagggctgcagtgccaggactctaaccaaccgtgcatcaacggcggcacgtgcgag
acattttccaacggcacgggcatctgcaagtgccagcgcaactttgtgggcatctactgc
cagctggataaccggtgcgccagctcgccgtgccagaacggcggcacgtgcagcaccgtg
gtgcggggtggtgtgccggactatgcttgcgagtgcccgttgggcttcatggaccccgtg
tgcctcacccccgccgacaacgcctgcctcggtgtgccgtgccacaacggcggcacatgc
cgcctgctctccctccacagattcgagtgccactgcctcctcgggtggagtggcaaaacg
tgcgagaaggccgacccgtgtgcctccaacccctgcgcgcacggcggtgcctgtcgcgcc
gtgggctcacgctacgcctgcgcctgccggcccggcttctcggggcccatgtgccgcgcc
gacgtggacgagtgcgccgccaggccctgccacaacgggggctcttgcgccaacgtgccg
ggctcgtacgcgtgcgcatgccccgctgcctacactggccgccactgcgagacggcgtac
gtgccctgcgccccgtcgccctgcctcaacgggggcacctgccggcagacgggcgacacg
gcctacgactgctcctgcctgccaggcttcgaaggaagggattgtgacgtgaacgtggac
gactgcccgggcaaccgctgcgacaacggggccacgtgcgtggacggggtcaacacatac
aactgccagtgctccccgcagtggaccggccagtactgcacggaggacgtggacgagtgc
cagcttcagcccaacgcgtgccttaacgggggcacgtgccacaacacgcacggcggatac
aactgcgtgtgcgtcaacggctggaccggcgaggactgcagcgagaacatcgatgactgc
gccatcgctgcctgcttcaacggcgccacgtgccacgaccgcgtcgcctccttcttctgc
cagtgcccactcggcaagaccggtttgctgtgccacttggacgacgcgtgtgtgagcgac
ccgtgccacgagggggccatctgcgacacgaaccccatcaacggcaaggccatctgcacc
tgtcgtgccggattcaccggcggcgcctgcaaccaggacgtggacgaatgctccatcgga
gcaaacccctgcgagcacggagggcgctgcatcaacacccagggctctttccgctgccag
tgcacggcaggtttcacgggcccgcgctgtgaaacggacatcaacgagtgtaactcaatg
ccctgtctcaacgacgctacctgcctcgacaagatcggagaattcacctgcatctgcatg
ccaggtttcgaaggacggcactgcgagattgacatcaacgagtgccagagcggaccttgc
ctcaatgacggaaactgcacggaccatgtgaatggcttcttatgccgctgcccacccggc
ttcacggggcccatgtgtcagatcgacatggacgagtgcgccagcacgccgtgtctcaac
ggggccaagtgcgtggaccagcccaatgcctacttgtgcgagtgcacagaaggctttgca
gggctggtatgcgagctgaacgttaacgagtgccagcctgacccgtgccaccacggcaag
tgcgtggatggcatcgccagcttctactgcgtgtgcagccccggctacaccggcttccta
tgcgactcccagctcaatgaatgccagagcagcccctgccagaacgggggcaagtgcgtg
gatctggtgaaccgctaccactgccagtgccccgagggcactgaaggtgtgaactgtgag
acgaactttgacgactgcgcaggagatccgtgccagcgtgggaagtgcgtggatggcgtc
aacgagtaccggtgcctttgcgacgctggctacactggcctgcaatgtgacgtcgagctg
aacgagtgcgagtcgtctccgtgccacaacgacggctcgtgcaaggacctcgtcgacgcg
tttgagtgcgtgtgcctgccggggttccacgggccgctgtgctactcagagactgatgcc
tgctatgccagcccctgtctgcatggaacctgcctcgaccatggggaatcctatcggtgc
gcctgcgaagcgggctggacagggccgctctgcgaggtggacatcgacgagtgcgagtcg
tcaccgtgccagaacggaggcgcctgccaggagcacctcgacggctacacgtgccggtgc
cgcgacggcttcaaaggccctacctgccagaagaatgtgaacgagtgcgtctccaacccg
tgcctgaaccggggcacatgcgtggacggggtggccggctacacatgcctctgcacgctg
ccgttcaccggccgtaactgtgaggcggtgatggccccgtgcgcctcccagccgtgccac
aacgcggccacctgcaaggagtcggtgaacttgtcctccttctcctgcgcatgtcctccg
ggctggcgtggtgccacctgctcgctggacatcgacgagtgcgccggcgtgccgtgccag
cacgggggggcttgcatgaacacgcagggtggattccggtgctcctgccgccccggctac
acaggccccacgtgccagacggacatcgacgactgcagcccgaatccgtgccagaatggg
ggctcatgcactgacagcatcggcgccttcagctgcaagtgccgccccggattccgtggg
tcgcgctgcgagacggaggtgaacgagtgtgccagcaacccctgccgcaacggaggctcg
tgcgccgactatgtcaacagctatacgtgccgctgccggcccggcttcaacggcatccat
tgcgagcacgacatcaccgagtgcaccgacagctcgtgcctaaacggcggctcgtgcgtg
gacggcatcaacgcgtacacgtgcctgtgccgcggcggcttcacgggaagctactgccag
ttcgacatcgacgagtgcgagtcccagccctgccagcacggaggcacctgcctggacggc
ctgggcacctacaagtgcacgtgcccgcgcgggtacactggagggaactgccaggcgctc
gtggactggtgctcctcgtcaccctgcaagaacagtgggtcctgtgtgcagtcgcgcacg
tcataccgctgcgattgccacagtggctggactggcctctactgcgacatccccaatatg
agctgcgatacggctgccagaaacaaaggcctgtcggtcagccacctctgtcggcacggg
ggtcgctgcattgacgcgggcaacacacaccactgccagtgctcgcgtggcttcgagggc
agctactgcgagaaggaggtggacgagtgcacctccaacccctgccacaacggggccacc
tgccggaacttcctcgggagctacaagtgcgagtgccccgtgggctaccatggcttgaac
tgcgactatgaaatcaacgagtgcctctcgcagccgtgccagaacggcggaaagtgcatc
gacctggtgaatcgcttcaactgcgtgtgcccgcccggcacccagggaatcctgtgtgag
atcaacactgacgactgcaacccgggccccgacgcaccgatgcccgggccccggtgcttc
aatgggggctcatgcgtggacggcgtgggcagcttcacgtgctcgtgcccgccaggcttc
gtgggcgagcgctgtgagggcgacgtcaacgagtgtttgtccaacccctgcgaccccagg
ggctccctcgactgcatccagctcgtcaacgactacaagtgccagtgccggcccgggttc
acaggtcacaactgcgaggtggtgatcaatacgtgccggctggagccgtgccgcaacagc
ggcacgtgcatgatcaccgtcaacacgccgctgggattcacctgcctgtgcgccccgggc
tacgcgggccatgcgtgcgaggacaacgcgtacacgtgtggcaacctgagctgccgcaat
ggcggcacgtgcctgctggaccgtgccgcgggcccgctgtgcgtgtgcccgcgtgcgtgg
cgcggccccgagtgccagtaccatagcggcggtggcggaggaagcagcgcatgtgccagc
tcaccgtgcgagaatggcgctgcgtgctacgaggaggtgcgcccaccattctaccgctgc
gtatgcccacccctcttcacagggccgcgatgccgggtgctgggcccaaaggtgcccggc
gacgccagctcgggccgcgctctgcctgtgccgccccccgtgctggaagagagctgccct
gtcgccgagtgcgagagccacgcgggcgacggactatgcgaccgggactgcaacaaccac
gcgtgtgcgtgggacgggggcgactgttccctgcacttcccctcgccctggcgcaactgc
tccattcggctgcagtgctggctccgcttccgcaacggcgagtgcgacgagcagtgcaac
tccctgggctgcctttttgacgggttcgactgccagctcggcatgaagaactgcaacccg
ctgtataacgcctactgcacggcacactatgccgaccagcactgcgaccagggctgcaat
agcgacgagtgcggctgggatgggggcgactgcgcgggcgaggtgcccgagcggctggcg
gacggcgtgctggtgctcatcgtgctgctgccgcctgcgcgcgtgcacaacgactccgcc
aacttcctgcgccagctgggcagcctgctgcatgccaccgcgcgcttcaagaaagacacc
aatggccaggacatgatcttcccctactacggggacgaggcgagggggggtgtcgggccg
cgcctggagcgcgcgtcccgctcgcttccgcgattcgtccgggagatggagcggccactg
atcggctccaaggtttatgtggagatcgacaaccgccactgctaccagacctcggaccgc
tgcttctcgagtgccgccgatgcggcggcgttcctcgccgcgcaggcgacacatggcagc
ctccccctgcccctcctgggtgtctccagcgaggtgcctgacgtgacggcgccgcgtgtc
caagtctacgtgctgctgggcctcgtgctgctcgtgctcatggtggttgtgctgctcggc
gtgctggtcgggcgcaagcggcggcgcgagcagggcaccctctggttccccgaaggcttc
atcctgggccccccctctgacaagaagaagcgccgggagcccgtgggacaggacgacgtg
ggaatgaagaccttgtctcagagctccgtggaggacagtcttatcgatggaaaccagaac
gaggcgtggctggatggcagcgtgcccagcaccaagcgtaggaagctggaggagcagggg
atgttgcctgaggccgaagagccggtggaccaccgcccgtggacgcagcagcatctggag
gcagccgacatccgcacggcacctgcactcgcgctggcgctcaccccaccacagggcgag
gctgacgatggcatggacgtgaacgttcgggggcccaacggcttcacgccgctcatggtg
gcatcattccacggcgggggccttgactcgagcctctgcgatgaggaggagagtagcgac
ggccttttcgaggacggcgccgatgacggttcggccaacgtcatcaccgacctcatctgc
cagggcgccgcgctgcacgcacagacggaccgcactggtgagacggcgctacacctggca
gctcgctacgcgcgctccgacgccgccaagcggctgctggatgccggcgccgatgccaac
cttcccgacaacatgggccgctcgccgcttcacgccgccgtgtcggccgacgcgcagggc
gtgttccagatcctcatccgcaaccgtgccacggacgtggacgcgcgcatgcacgacggc
acgacgccgctcatcctggccgcgcggctcgccgtcgagggcatggcggaggagctcatc
aactgccacgctgacgtcaacaaagtggacgacctcgggaaatcagcgctgcactgggcg
gcagctgtgaacaacgtagaggccaccctcgtgctgctcaagaacggagccaacaaggac
atgcaggacaacaaggaggagacgccgctgttcttggcagcccgcgagggcagctatgag
acagccaagctgctactggatcactttgccagccgcgacatcacggaccacgtggatcgc
ctgccaagggacatcgcgcaggagcggctgcaccacgacattgtccgcctcctggacgag
tacaacgtcgtgcgcaacccctcggggcccaacggcctcgtctccccgccgcaagccaac
ggcgcctacgcccacggcgccaaggctggaaagaaaggggtgcggcggcccggcaacaag
tcgggcgtggcgcacgatgccgccaagtgcaagaaggctcagaagaaagtgaacggcggc
atcgcgagcggtggcggtggcgatggagcgccgctgctaggattggacggatcggcgtcg
ctatctcccgtcaactccgagtcgtcgcagtcggatgcgacctccccatccttgctgaca
tctccgcacgcagcgcattccctctacgcctccatggaggccgtcggctgcggcccccct
cgcgtcggccacccgatggctttcaggaacggagccatagcggtggcgtccggatggata
aaccccatgcagaatgtgcctctgtcgcagttcgctcatcaaggccactcgctcggcctg
acgtcatcgcaccctcagtctaaccacagggccatgatgtcacccctgcacccggccatg
atcaatagccaacatcaccagatgctggcctttcagcagaacttgtattcaccgagaaat
aaacccctcatggaggctccacagcatcacccggagcaggcccgtggcggggcttttttt
cagtccaagatgccaatgatgcagccacaaagcaacctgcaggccgcatcccaacagtcg
caactcctagcatccattagccaaggcaatatgtttccttctcttcaacagcagcatcag
cagcatcagggaatcgcagtgcccatgcagagttttgtagggagcgaatttggagaaagc
tttactgccaatgactacaagcccaacgagatgtcccgctcgcagaccagctgcgtgcta
acgcagaccgtgctgcctccccaggaggcaaatccctcggcgcagtcgagccagctcgcc
aagcacgagggggcggcccccgcagagcagttccccacgccgccgtcccagcacagccgt
ggcgagggcagccccgggcacgcgcccccgcccggcacccctggcgagcacccctacctt
accccttcccccgagacccctgagcgctggtccacatgctcgccccgctcgggggcgtcg
gattggtccgacggcgtctccagtccgcccggcttagccgcacgggcacagcgccggccc
gccgaccctcagcagcagctgcacaacctgcaggcgctcatgtaa
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integrated database retrieval system
