Lethenteron reissneri (Far Eastern brook lamprey): 133342007
Help
Entry
133342007 CDS
T09663
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04150
mTOR signaling pathway
lrj04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133342007
04150 mTOR signaling pathway
133342007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133342007
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
133342007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
EGF_LRP2
DUF5050
Vgb_lyase
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
133342007
NCBI-ProteinID:
XP_061406856
LinkDB
All DBs
Position
2:6761220..6854725
Genome browser
AA seq
1719 aa
AA seq
DB search
MSAVGEPWPRLTPRRLPLAVCCWAGLLSLSAAWPLLLFANRRDIRVVDAAASSPRGAGRT
ARANVSVVLAGLEDAAALDYVYDEGTVYWSDVSDEAIKRAQLNRSLVGGSPTVVVSGLVS
PDGLACDWLGRKLYWTDSEMNRVEVAELDGSHRAVLVWSELDQPRAIALHPVKGYMYWTD
WGEVPKIERAGMDGTARSVIIDTNVFWPNGLTIDYEASKLYWADAKLSYIHRANLDGTFR
QVVIDGSLPHPFALTLLADSLYWTDWQTRSVHACSKLTGSDRRQIVTDIYSPMDIHAYSP
LRQPTGRNPCGDDNGGCSHLCLMSPAKPHFSCVCPTGVQILADNKTCRQGAQEVLLLARR
TDLRQISLDTPDFTDAVLAGAGEVRHAIAIDYDPVEGHVYWSDDELRVVKRASLQAAGGG
PADPTTEETLVWTEVQHPDGLAVDWIARNLYWSDTGTDHIEVARLNGSSRQVLVSEDLQE
PRALALHPLAGYMYWTDWGERPKIEQANLDGSERVVLVNTSLGWPNGLALDIALGTLYWG
DAKTDRIEMIKLDGSGRRVLVEDKLPHIFGLTLLGDFVYWTDWQRRSVERAHKHTGERQV
LIDQLPDLMGLKATAIAAPSGTNACAGEENGGCSHLCLFRPAGLRCGCPLGQELLADART
CVVPKAFLLFSRRGDIRRISLETNARGDVAIPLAGIKEASALDFDVADNRIYWTDISLKT
ISRAYMNGSAMATVIEFGLDYPEGMAVDWLGKNLYWADTMTNRIEVARQDGAHRAVLVWK
DLDNPRALALDPVEGYMYWTEWGGRPRVERACMDGTERRVLLTNVGRTNGLTIDYAARRL
YWADLDTYLIESSDLLGENRGVIADDLPHPFGLTQYQDYIFWTDWTRRSIERANKTDGKN
RTLIQSQLDDVMDILVFHSSRQGGWNACVMGNGQCSHLCLARPGGSYVCGCPAHYTLNAD
NRTCSPPTSFLLFSQRTAVNRMLLDDLQSPDIVLPLPSLRSVRAVDYDPLDKLIYWVEGR
QGTIRRAREDGTQLWTLVAAWGGGSQPFDLSLDVYSRSIYWTCESTNVVNVTRLDGRPVG
VVLGGGADRPRSIVVNPERGYMYITNLQDRAPRIERASLDGTEREVLFTSGLSRPSALAV
DNAPGRLYWADAELKRIECSDLNGANRIVLEESNILQPVGLAVFGAHLYWIDRQQQLMER
VAKEGGGGRTKVQGRMPYLTDVLTAHEMPLAHYRSHPCFGDNGGCSHICIVKGDGTTRCS
CPVHLVLLQNELTCGEHPTCSAEQFACWTGEIDCIPLAWRCDGYAECDDQSDERDCPLCS
DAQFQCRSGQCVDAALHCNGDSDCQDMSDESSCYECPGDMFQCGSGQCLLRRQRCDGAAD
CPDASDEDACPLTPLPPSSHVPAGYTISSVVGVVFLALVMVAGACFVCQHLLCLRGRRER
RRGGGVVGGGSVGGIGGTAGVIVGADLGPGGHAGGFGGSAGGGLPVHTPLAFMPRSGAHG
GCHMGASRGKSLMSFNSLMGVGGGGGGGSNGAPPYDRAHITGASSSSSSSKGTFFPPNLN
PPPSPATDRSRYTGIPNYSSTPSTYRAYRHQKPHAVAPPTTPYSTDVCDSDCPVVPLGPA
RGWRPGPRHAANAASVGGVVCAPPPPPVALPGPPAAPPRYCGGGGDAAAAAYDSEPFAPP
PTPWSQYLSAEDSCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggtgggcgaaccgtggccgaggctgacgccgaggaggctgccgctcgcggtg
tgctgctgggccggcctcctgtcgctctcggccgcttggccgcttctcctcttcgccaac
cggcgggacatccgcgtggtggacgcggcggcgtcgtcgccgcggggtgccgggcgaacg
gctcgggccaacgtctccgtggtgctggccggcctggaggacgcggcagcgctggactac
gtctacgacgagggcaccgtctactggagcgacgtcagcgacgaggccatcaagcgcgcg
cagctcaaccgctcgctcgtgggcggctctccgactgtggtggtgtcgggcctggtgtcg
ccggatggtctggcgtgcgattggctgggccgcaagctctactggaccgactcggagatg
aaccgcgtcgaggttgccgagcttgacggctctcaccgcgccgtgctcgtgtggagcgag
ctggaccagccccgtgccatcgccctgcatcccgtcaaaggctacatgtactggacggat
tggggcgaggttcccaagatcgagcgggctggcatggacggcacggcacgttccgtcatc
attgacaccaacgtcttctggcccaatggcctcaccatcgactatgaggcctccaagctg
tactgggcggacgccaagctcagctacatccaccgcgccaacctcgacggcacattccgg
caggtggtgatcgacgggtctctgccgcacccgttcgcactgacgctgctcgccgactcg
ctctactggaccgactggcagacgcgctccgtgcacgcgtgctccaagctcacgggctcc
gaccgacggcagatcgtcaccgacatctactccccgatggacatccacgcgtacagccct
ctgcggcagcccactggccggaacccttgcggcgacgacaacggaggctgctcgcacctg
tgcctcatgtccccggcgaagccgcacttcagctgcgtgtgccccacgggcgtgcagatc
cttgccgacaacaagacctgccgccagggcgcgcaggaggtgctgctgcttgcgcgacgc
acggacctgcggcagatctcgctcgacacgcccgacttcacggacgcggtgctggcgggc
gccggcgaggtgcgccacgccatcgccatcgactacgaccccgtcgagggccacgtgtac
tggagcgacgacgagctgcgcgtggtgaagcgcgcgtcgctgcaagccgccggcggtggc
cctgccgaccccacgacggaagagacgctggtatggacggaggtgcagcacccggacggg
ctggcggtggactggatcgcccggaacctctactggagcgacacgggcaccgaccacatc
gaggtggcgcgtctcaacggctcgtcgcgccaagtcctcgtctccgaggatctccaggag
ccccgggcgctcgcgctccaccccctggccgggtacatgtactggacggactggggcgag
cggccgaagatagagcaggcgaacctggacggctctgagcgcgtcgtgctcgtcaacacg
tcgctgggctggcccaacgggctggcgctcgacatcgccctgggcacgctgtactgggga
gacgccaagacggaccgcatcgagatgatcaagctggacggctctggccgccgcgtgctc
gtcgaggacaagctgccgcacatctttggcctcacgctgctgggcgacttcgtctactgg
accgactggcagcggcgcagcgtggagcgcgcccacaagcacacgggcgagcggcaggtc
ctcatcgatcaactcccggacctcatggggctcaaggcgaccgccatcgccgctccgtca
ggcacgaacgcttgcgccggggaggagaacggcgggtgcagccacctttgcctgttccgc
ccggcgggtctccgctgcggctgccccctgggccaggagctgctggcggacgcgcgcacg
tgcgtcgtgcccaaggccttcctgctgttctcgcgccgcggcgacatccgccgcatctcg
ctggagacgaacgcccgcggcgacgtcgccatcccgctcgccggcatcaaggaggcgtcg
gcgctcgacttcgacgtggccgacaatcgcatttactggaccgacatcagcctcaagacg
atcagccgcgcgtacatgaacggcagcgcgatggcgacggtcatcgagtttgggctggac
taccccgagggcatggccgtggactggctgggcaagaacttgtactgggcggacacgatg
acgaaccgcatcgaggtggcgcgccaggacggggcgcaccgcgccgtgctcgtgtggaag
gacctggacaatccgcgcgcgctggcgctcgatcctgtcgaaggctacatgtactggacc
gagtggggcgggcggccacgcgtggagcgcgcctgcatggacggcacggagcgccgcgtg
ctgctcaccaacgtgggccgcaccaacggcctcaccatcgactacgcggcgcgccgcctc
tactgggccgacctggacacctacctcatcgagtcttctgacttgctgggagaaaaccgg
ggcgtgatcgcggacgaccttccgcacccgttcggcctcacccagtaccaggactacatc
ttctggacggactggacgcggcgcagcatcgagcgcgccaacaagacggacggcaaaaac
cgcacgctcatccagtcgcagctggacgacgtcatggacatcctggtgttccactcgagc
cggcagggcggatggaacgcgtgcgtcatggggaacggccagtgctcccacctgtgcctg
gcgaggcctggcgggagctacgtgtgcggctgcccggctcactacaccctcaacgccgac
aaccgcacctgctcaccgcccacgtcgttcctgctgttcagccagcgcacggccgtgaac
cgcatgctgctcgacgacctgcagagccccgacatcgtgctgccgctgccgtccctgcgc
agcgtgcgcgccgtcgactacgaccccctggacaagctcatctactgggtggaggggcgc
cagggcaccatccgtcgtgcccgcgaggatggcacacagctgtggacgctggtggcggcg
tggggtggcggctcgcagccgttcgacctcagcctggacgtgtacagccgctccatctac
tggacgtgcgagagcaccaacgtggtgaacgtgacgcgcctggacgggcgccccgtcggg
gttgtgctcggcgggggcgccgatcggccccgctccatcgtcgtgaacccggagaggggg
tacatgtacatcacgaacctgcaggaccgggctccgcgtatcgagcgcgcctccctggac
ggcacggagcgggaggtgctcttcaccagcggcctgagtcgcccctccgcgctggcggtg
gacaacgcgcccgggcgactctactgggccgatgccgagctcaagcgtatcgagtgcagt
gacctcaacggggccaaccgcatcgtgctggaggagtcgaacatcctgcagcccgtgggg
ctcgccgtgttcggcgctcacctctactggatcgaccggcagcagcagctgatggagcgt
gtggccaaggagggcggcggcggccgcaccaaggtgcaggggcgcatgccctacctcacc
gacgtgctgaccgctcacgagatgcccctcgcccattaccggagccacccgtgctttggg
gacaacggcggctgctcccacatctgcatcgtcaagggggatggcaccacgcggtgctcc
tgccccgtccacctcgtgctgctgcagaacgagctcacgtgtggggagcacccgacgtgc
agcgcggagcagtttgcatgttggacgggcgagatcgactgcatcccgctggcgtggcgc
tgcgacggctacgccgagtgcgacgaccagagcgacgagcgcgactgccccctgtgctcg
gacgcccagttccagtgtcgcagcgggcagtgcgtggatgctgcgctgcactgcaacggc
gactcggactgccaggacatgtccgacgagagcagttgctacgagtgcccgggggacatg
ttccagtgcggcagcgggcagtgcctgctgcggcggcagcgctgcgacggcgccgccgac
tgcccggacgcctctgacgaagacgcctgcccgctgactccgctgccgccgtccagccac
gtgccggccggctacaccatcagctcggtggtgggcgtcgtcttcctggctctcgtcatg
gtcgccggcgcctgcttcgtgtgccagcacctgctgtgtttgcgcgggcggcgggagcgg
cggcgcggcggcggcgtcgtcggcggcggcagcgtcggcggcatcggcggcaccgccggg
gtcatcgtcggcgccgacctgggcccggggggccacgctggcggctttgggggcagcgcg
ggaggggggctgcccgtgcacacgccgctggccttcatgccccgctcgggcgctcacggc
ggttgccacatgggtgcctcgcgtggaaagtccttgatgagcttcaacagcctgatgggg
gtgggcggcggcggcggcggcggcagtaacggggctccaccctacgaccgcgcgcacatc
accggcgcctcctccagcagttcatccagcaagggcacgttcttcccgccgaatctcaac
cctccaccctcgcctgccacggaccggtctcgctacacggggatccccaactacagcagc
accccatccacatacagggcctacaggcatcagaagccgcacgccgtcgcccccccgacc
acgccgtacagcacggacgtgtgcgacagcgactgccccgtcgtgccgctcggccccgca
cgcggctggcgccccgggccccggcacgccgccaacgccgcctccgtggggggcgtcgtc
tgcgcgccgcccccaccgcccgtcgctctccccgggccgccggcagcgccgcctcgctac
tgcggcggcggcggcgacgcggcggcggcggcgtacgactcggagccgttcgcaccgcct
cccacgccctggagccagtacctgtcggccgaggacagctgccccccgtcgccgtccacc
gagcggagctacttccacctgtgccctccgccaccgtcaccgtgcactgactcgtcgtga
DBGET
integrated database retrieval system
