Lethenteron reissneri (Far Eastern brook lamprey): 133342054
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Entry
133342054 CDS
T09663
Name
(RefSeq) cell adhesion molecule DSCAML1-like isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133342054
Cell adhesion molecules [BR:
lrj04515
]
Immunoglobulin superfamily
DSCAM family
133342054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Interfer-bind
V-set_CD47
ChitinaseA_N
LapA_dom
Motif
Other DBs
NCBI-GeneID:
133342054
NCBI-ProteinID:
XP_061406943
LinkDB
All DBs
Position
13:6729665..6911532
Genome browser
AA seq
2195 aa
AA seq
DB search
MWLVSVLLLCPVLTARGNEVGPSLHYAAGFPQQVTFLAPAGTLLPCPVSGTPSARISWYR
ELGSPASDESEEVHDSLGVRQLHPNGSLQLLPMTGEKSAGPSLHDGTYYCTAENAAGRLR
SLPIRLTAVFREPYTVHVEDQRAMLGQTAVFRCLVPPSLSEHISIVSWEKDTEPISSGDR
YRISSTGALYVSDVQTEDGLSSYRCSTRHRYTSETRQSNSGRLTVTELVNSAPSILDGFS
SHVVAASGSRSELACTAAGHPAPRSRWLRDGVPLPPDRRRGAGGSGLVITDTTVEDSGAY
VCEVWNSFGVAAVSGRLTIKAPVVVRVDPHRLKTTLSGTAEFSCEVSGAAGDGMVTWFHN
GDPPTPTASVSGAQGERLSVHAAGRSDGGTYQCVARGEGGDTAQDFSILMLEDGSPKIAS
SFSERVVSPGEPFSLQCVVRGSPPPTIAWTLDGEPALSRDAPHRRGNHIVTHGDSAGPAA
AAGSGSEARVAEAGEGGGEVGGAVVTGYLNVTGARVTDGGVYRCQAGNTAGQAEYQARIN
VRGSPSIRPMRNVTAIAGREAYLHCRVIGYPYYSIRWLREGTPLPYNHRQTVFANGTLRL
ADVQKGMDEGAYICSVLVQPGASPSRSLIVTVKEPPLIQPFEMPAVTQGQRVYVPCVIVS
GDSPIRITWHKDGQPLPPRLGAQVETTEFISSLLIPNVTQLHNGNYTCLARNEAATVSHG
SQLIVRVPPRFVVQPKDQDGIFGKPVVLNCSADGYPIPKIIWKYSKGNGNPQFQPVLSGG
GRFQPLGNGSLLLRQVQEEDGGFYLCQVSNGVGTDISKSMLLHVKIPALVTSQANVTLAT
RGQHSNLQCSARGERPIIIRWEKEETLIDPERMFRYVVYTQDTGDELLSTLQILPTVRGD
SGFFTCHAINSYGEDRGLIQLTVQEPPDPPEVEVREVNARTITLRWTSGFDGNSPITAFD
IEYKNRSETWEQKQRTKDISSTINQATIIDLHPATNYVFRVYAKNRIGASEPSKDLPITT
QEAAPDGPPLEVILEPQSSQSIRVTWKVPHGHLRNGVIRGYQIGYREAEPGSGALSQFNI
VRLESTGERESCLLHHLKKFTRYAVMVQAFNLAGSGPSSSEAYAATLEDVPSKPPANIQA
ASISADAISLSWSPPPRDAHNGLLQGYRVIYYPVLPDGELGDVRNLTASQLRADLRDLEK
FTNYSLQVLAFTRAGDGVRSVATFVCTQEDVPCPPAAVKAAPASASSVVVSWLPPAKPNG
IIRKYIVVCAFPYVPHPLISEYEVSPESTHHSISNLSRHRQYSVWVAAVTSAGRGNNTES
VSVEPSPNAPARILSFGGPISSPWMRDVELPCRSVGEPTPVVRWTKESDTSQVAVPADEH
GSFLPNGSLLLRSVRAEDSGEYSCTASNAWGSDALLITLLVQVPPDQPRLSVSKTSASSI
TLSWIPGNNGGSPLRGYLLQYSVDRSEQWEEMVISPHQKRYALERLRCGTWYKFTLAARN
VVGTGRISEIIEAKTHGREPHFVKDAELVLPMNVSVVRVNLRGWDDGGCPISSLALEYQP
SGAGVNAPAGPGGGGGGGGGGGGGGGGGSGGGIAGAGGVNPGAPGTAVGAAVPPAGGPGA
AAAGGAGASSATWSPVLETSDAAAPIMLAGLLEATWYRLRMRACNAAGCAEHSADFATLN
YDGSTIPPLLKATVTVNNENLSPSQELRLLLIVSCLLGLGLLTLALLVYIRRRRRQQRLK
RLRDAKSLAEMLISKNSRPVDTPVKREQQTPRIHIDVPRGQLLIENKDSTEQLGPEAQNI
NRPATNSTIKDVIEGDDKSTILLTDSDYSQAGKSRTYSGGHTLPHPHPHPHPHPHPHPHP
HPHPHPAPAAGPVDTLIDTSNTRPGTNPVSRKHVRHPPPPPRSRYASQWTLSRLQGSACA
RTLPPDCRVITPRAADCRVITPRTGESDSYSISPSQDTDKGRNSMVSTESASSTYEELAR
AYEHARMEEQLKNATFEITECFVSDTSSEQRLTGGTAGTGGEPGGDSLTSGSTPSESGIC
RFTASPPKPQVASTNQGSMAMPIAHRAGDYCNLPVYVKREGAAGKVAAPREVAVPQASGS
NIPEPQASFPKPPASSAGREQPAPVHPAFPPANAPPPSSEGPPLPPPANAAHRHGSNPSI
RPSGSRDSIDEQGLAGPSRPQKPGANVYSKSYTLV
NT seq
6588 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcgtcagcgtcctccttctctgcccagtcctaaccgcacggggcaatgaggtg
ggccccagcctgcactatgcggccggcttcccccagcaggtgacctttctggcaccggca
ggcacactcctgccctgcccggtgtccggaacgcccagcgctcgcatctcgtggtaccgc
gagctgggaagccccgcgagcgacgagtccgaggaggtgcacgactcgcttggcgtgcgg
cagctgcatcccaacggctccctgcagctgctgcccatgacgggagagaagagcgccggc
cccagcctccatgacggcacctattactgcacggccgagaacgccgcgggcagactccgc
agcctgcccattcggctgaccgccgtgttccgtgaaccgtacaccgtgcacgtggaggat
cagagagccatgttgggccagacggccgtcttccgctgtctcgtgccgccctctctgagc
gaacacatctcgatcgtctcatgggagaaggacactgagccaataagctccggagaccgc
tatcgcatctcgtccacgggagccctctacgtgtcggacgtgcagacagaggacggcctc
tcaagctaccgctgctccacccgccaccgctacacgagcgagacgcggcagagcaatagc
ggcaggctgaccgtcaccgagttggtgaactctgcgccgtcgattctggacggcttctcg
tcgcacgtggtggcggcgtcgggttcgcgctccgagctggcgtgcacggccgcgggacac
ccggcgccgcgttcccgctggctccgcgacggcgtgccgctgcctcccgaccggcggcgg
ggcgcgggcggctcgggcctcgtcatcaccgacacgacggtggaggactcgggggcctac
gtctgcgaggtgtggaacagcttcggggtggcggccgtcagcgggaggctcaccatcaaa
gcccccgtggtggtgagggtggatccacaccgtctcaagaccacgctgagcggcacggcg
gagttctcctgcgaggtgtcgggagcggcgggcgacggcatggtcacgtggttccacaac
ggcgacccgccgacccctacggccagcgtatcgggggcccagggcgaacggctgtcggtg
cacgcggctggcaggagtgacggcgggacgtaccagtgcgtggcgcggggcgagggggga
gacaccgcccaggacttctccatcctcatgctagaggacggtagcccgaagatcgcctcg
tcgttcagcgagcgcgtcgtgagccccggggagcccttctcgctgcagtgcgtcgtgcgc
ggctctccgccccccaccatcgcctggaccctcgacggcgagccggccctctcgcgcgac
gctccccatcgccgcggaaaccacatcgtcacccacggtgacagcgcagggcctgcggcg
gcggcagggtcagggtcagaagcgagagtggcagaagcgggagaaggtggaggagaagtt
ggaggtgccgtggtgaccggctatctgaacgtgacgggcgcgcgcgtgacggacggcggg
gtgtaccgctgccaggccggcaacaccgcgggccaggccgagtaccaggcacgcataaac
gtaagaggatctccaagcatccgtccgatgcgcaacgtgacggctattgccggcagagaa
gcctacctccactgccgcgtcatcggctacccctactattccatccgttggttgcgagag
ggcactccgctaccctataaccacaggcaaacggtgttcgccaatggaacattacgcctg
gcagacgtgcagaagggcatggatgagggggcatacatctgcagcgtgctggtgcagccc
ggagccagcccaagccggagtcttattgtcactgtgaaagagccgccgctcatccagcca
ttcgagatgccggcggtaacgcagggccagcgcgtctacgtgccctgcgtgatcgtgtcc
ggcgactcgcccatccgcatcacgtggcacaaagacgggcagccgctgccgcctcgcctg
ggcgcccaggtggagacaacggaattcatcagctcgctgctcatcccaaacgtcacgcag
ctccacaacggcaactacacgtgcctggcgaggaacgaggccgccaccgtcagccacggg
agtcagctgatcgtcagagtgccaccacgttttgtggttcaacccaaggaccaagatggg
attttcgggaagcctgtggttttgaactgctcagccgatggctacccaatacccaagatt
atctggaagtactcaaaaggcaacgggaacccacagttccagccagtgctgagtggcggt
ggccgcttccagccgctcgggaacggatccctgctcctccgtcaggtgcaggaggaggac
ggaggcttctatctgtgccaagtcagcaatggagtgggcaccgacatcagcaagtcgatg
ctgctccacgtgaagatcccggccctcgtgacctcgcaggccaacgtgacgctggcgacc
cgaggccagcacagcaacctgcagtgctcggcgcgcggggagagacccatcatcatccgc
tgggagaaggaggagacgctcattgatcccgagcgcatgttccgctatgtcgtgtacacg
caggacacgggggatgagctgctctccaccctgcagatactgcctacggtacgcggagat
tctggcttcttcacgtgccacgccatcaactcttacggcgaggacagagggctcatccag
ctcaccgtgcaagagcccccggaccccccagaggtggaggtgagggaggtgaacgctcgc
accatcaccttgcgatggaccagcggttttgacggcaacagtccaatcaccgcctttgac
attgagtacaagaacagatcagaaacttgggaacagaagcagagaaccaaggacatttcg
tccaccatcaaccaagcgaccatcattgacctccatcctgccacaaactacgtgttccgt
gtgtatgccaagaaccgcatcggcgcgagtgagcccagcaaggatctgcccatcaccacc
caagaagccgccccagatggacctcctttagaagtcatattggagcctcaatcttcgcag
agcattcgtgtcacatggaaggtgccgcatgggcacctgcgcaacggtgtcatccggggc
taccagatcggctaccgcgaggctgagccgggcagtggtgccttgtcgcagttcaacatc
gtgcggctggagagcacgggcgagcgcgagtcttgcctgctgcatcacctcaagaagttc
acgcgctacgccgtgatggtgcaggccttcaacctggccggcagcggcccatcatcctct
gaggcctacgccgccacgctggaggacgtgccaagcaaacctcccgcaaacattcaagcc
gcctccatatcggctgacgccatttccctgtcgtggtcgcctccgccccgtgacgcgcac
aacggcctcctgcagggatatcgagtcatttactatcccgttcttcccgacggagagctt
ggggatgtgagaaacttgaccgcgagccagctgcgagccgacctcagggacctggagaag
ttcaccaactacagcctccaggtgctggcgttcactcgcgccggagacggagtccggagc
gttgccacctttgtctgcacgcaggaggacgtcccctgcccacctgcggctgttaaggct
gcacctgcttcagccagcagcgtcgtggtgtcctggcttccacccgccaagcccaacggg
atcatccgcaagtacatcgtggtgtgcgccttcccttacgtaccccaccccttaatcagc
gagtacgaggtgagcccggagagcacccaccactccatcagcaacctcagccggcaccgc
cagtacagcgtgtgggtggcggcggtcacatcggcagggcgagggaacaacacggagagt
gtcagcgtggagccgtctccgaatgctcctgctcgcatcctgtcctttggtggccccatc
tcctcgccgtggatgcgtgacgtggagctcccatgccgctctgtgggggagcccacacct
gttgtccgatggacgaaggaaagtgacacgtcacaagtggcagtgcctgcggacgaacac
ggctccttcctgccaaacggcagcttacttctacgctccgttcgagcagaagattcggga
gaatacagctgtacagcctccaacgcgtggggctctgacgcactgctaataaccctactg
gtccaagtgcctcctgaccagcccaggctgagtgtttctaaaacgagtgcctcttctatc
actctatcctggatcccaggaaacaatggaggaagtcccttgcgtggctacctgttgcag
tactcggttgaccgcagcgagcagtgggaggagatggtcatctccccgcaccagaagcgc
tacgccctggagcggctgcgctgcggcacgtggtacaagttcacgttggccgcgcgcaac
gtcgtgggcactggccgcatcagcgagatcatcgaggccaagacgcacggcagagaaccg
cacttcgtcaaggacgccgagttggtgctgcccatgaacgtgagcgtggtgcgcgtgaac
ttgcgcggctgggatgacggcggctgccccatatcatccctggccctcgagtaccagccc
agcggcgccggcgtcaacgcaccagccggtccaggcggcggcggcggaggcggcggcggc
ggcggaggcggcggtggcggcggcagcggcggcggtattgccggcgccgggggcgtgaac
ccgggcgccccgggaacggccgtgggggccgccgtgccgcccgccggaggccccggcgcg
gccgcggccgggggcgccggggcgtccagcgcgacctggagcccggtgctggagacgtcg
gacgcggccgcccccatcatgctggccggcctgctggaggccacgtggtatcggctgcgc
atgcgcgcgtgcaacgccgccggctgcgccgagcacagcgccgactttgcgacgctcaac
tacgacgggagcaccatcccgccactcctgaaggcgacggtgacggtgaacaacgagaac
ctgtcgccgagccaggaactgcggctgctgctcatcgtgtcttgcctgctgggcctcggc
ttgctcacgctggctctgcttgtctacatccgacgccgccggcggcagcagaggctcaag
cgtctgcgagatgcgaaaagtcttgcggagatgctgataagcaaaaactcgcgccccgtg
gacacgccggtgaaaagggagcagcagactccacgcatccacatcgacgtcccccggggg
cagcttctgattgagaacaaggacagcacggagcagctcggcccagaggcccaaaacatc
aatcggccagcaacaaacagcactatcaaagatgtaatagagggggacgacaagtccacc
attctcctgacggactccgattacagtcaggctgggaagtcacggacgtacagcggaggg
cacaccttgccccacccccatcctcacccccatcctcacccgcacccccaccctcacccc
catcctcaccctcacccagctccagctgcaggacccgtcgacacgctcatcgatacctcc
aacacacgaccgggcacaaacccagtgtcgcgcaagcacgtgcgccacccgcccccacca
cctcggagccgctacgccagccagtggaccctgagccgcctacagggatctgcctgcgcc
cgcacgctgccgccggactgccgcgtgatcacgccccgggcagccgactgccgagtcatc
acgccacgcacaggcgagagcgacagctacagcatcagtccctctcaggacacagacaag
ggccggaacagcatggtgtcgacggagagcgcgtcgtccacttacgaggagctggctcga
gcgtacgagcacgcgcggatggaggagcagctcaagaacgccaccttcgagatcaccgag
tgcttcgtctccgacacatcctcggagcagcggctgacgggcggcacggcgggtacgggc
ggcgagcccggcggagacagcctcacgtctggaagcacgcccagcgagtcgggcatctgt
cgcttcaccgcctctccgcccaaaccgcaggtggcgagcacgaaccagggaagcatggcc
atgcccattgcgcaccgtgcaggagactactgtaacctcccagtctacgtgaagagggaa
ggggctgccgggaaggtggcggctccgcgggaggtcgccgtgccccaagcgagcggaagc
aacatccccgaaccgcaggccagcttccccaagccacctgcttcaagcgctggcagagaa
caacctgcaccggtccaccctgccttcccgccagccaacgcgccaccgccctcctccgaa
gggcctcctctaccgcctcccgccaacgcggcccatcgtcatggctccaacccttccatc
agaccttcaggctctagagactcgatagatgagcaaggcctagctggacccagcaggcct
cagaagcctggtgctaatgtttactcaaagtcttacacactggtttga
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