Lethenteron reissneri (Far Eastern brook lamprey): 133342265
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Entry
133342265 CDS
T09663
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133342265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133342265
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133342265
Intermediate filaments
Intermediate filament-binding proteins
133342265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DYH2-5-8_CC
Sec3_CC
PH_11
COG3_N
Motif
Other DBs
NCBI-GeneID:
133342265
NCBI-ProteinID:
XP_061407297
LinkDB
All DBs
Position
14:3711441..3865016
Genome browser
AA seq
2369 aa
AA seq
DB search
MMSATAEPQYDNVESSQQQQQQFVETNNRWDLMEEDWDNENSSARLFERSRIKALADERE
VVQKKTFTKWVNSHLARVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGKMRIHCL
ENVDKSLQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIHVETEDNRETK
SAKDALLLWCQMKTAGYTNVNIHNFSTSWRDGLAFNALIHKHRPDLIDYERLKKSNAHHN
LQNAFNLAEQKLGLTKLLDPEDINVDQPDEKSIITYVVTFYHYFSKMKALAVEGKRIGKV
LDNAIETDKMITKYESLASELLQWIEQTIMVLNNRKFVNSLTGVQQQLQAFNTYRTVEKP
PKFMEKGNLEVQLFTIQSKMRANNQIVYTPRDGKLISDINKAWERLEKAEHERELALRDE
LIRQEKLEQLARRFDRKAAMREAWLSENQRLVAQDNFGFDLPAVEAATKKHEAIETDIAA
YEERVLTVVDVACELEAEDYHDVRRITARRDNVLRLWDYLLELLRARRRRLEVNLALQRV
FQEMLHIMDWMDEMKVRLLSQDHGKHLLGVEDLLQKHALVESDIGVQAERVRSVNATAHK
FADNDEAYKPCDPQIILERVGHLEFCYGELAALAAERRARLEDSRRLWQHLWELEEDEAW
MREQEPALASAEVGRDLTSTLRLAAAQRALEDEMSGRRARLSLTVAGGEELARQGHPGAD
RIRARSAEVQAQWARLEDLARLRRERLQEALALYQFQADADDMEAWIAEVFRLVSSDEVG
TDEYSTQALVKKHRDVTEEIAQHRSALDGLYEMTQSLPAEAANSPEIRDRLETIEGEYRD
LVELALVRKQRLQDALALYTMYSEADACELWIDEKEKWLDAIVIPERLEDLEVVQHRFDS
LEPEMNGQASRVATVNDIAQQLANTGHPSEGDVRQRQDNLNKRWALFRELVERKKGGLYS
VLSIQNYFFEVTETMAWIREKTKVIELTAEPGSDLAGVMALQRKLTGMERDLAAIQAKMG
DLQTESERLIVEHPEQADAIRQRLNDNLEVWDELQRTLHSREASLGETSKLQQFLQALDD
FQAWLSRTQMAIASDEPPSSLPEAETQLAQLEGLRNEIDNNQEEFQRVRDMGALLTQDPS
DPQHGQLQEQLKSLDAGWDDVQALWESRHRQLTQAHGFQTFLRDAKQTEVFLTNQEYALS
HAEMPQTLEGAEAAIKKHDNFMNSMDANDERIHGVTELGARLVGDGNVNADKVSDKVDTI
QEWARRNREVAGDVLVRLRDNRDLQKFLQECRELTCWVNEKMLTAQDTSYDEARNLHSKW
LKHQAFMAELASNKEWLEKIKKDGEALVTEKPETEPVVRRELAELQRLWRELESTTQAKA
QRLFDANKAELFTQSCADLDKWIGELESHTQSDEYGKDLTGVNILLKKHQMIENQMEVRK
REVEELQTQASALRQEGQGSDEADGLERVVVVRLHQVMQPLQQRKGKLLASKEVHQFNRD
LEDEILWIDDHMPLASSTDHGHNLQTVQLLMKKNQTLQKEMQGHEPWVHDVCERGERLAA
DGGPDAAEVRERIGTLRDLWARLATEAERRQGRLQEALQAQQYYFDAAEAEAWMSEQELY
MMGDEKAKDEQSAVAMLKKHQNLEQAVEDYAENVHQLSEISRRLISDGHPESERIGLRQS
QVDRLYAGLKDLAEERRGRLEEWQKLFVLNREVDDLEQWIAEREVVAGSHELGQDYDHVT
MLQDRFRVFARDTVLIGQERVQAANEMVDEMIDGGHPDAASIADWKDGLNEAWADLLELI
DTRTQVLAASFELHRFLQQAREVLGRVTEKHQQLSDDLGRDQHSVESLQRVHTAFEHDIQ
TLGSQVKQIEEDAARLQTAYAGEKAEDIARREREVAEAWRALLDACGERRVRLVDTADKL
RFFRMVRDLLLWMEGVRRQIDAQESPRDVSSVELLMNSHQGIKAEIDTRNDSFAACVELG
QALLQRQHFASAEISEKLMELTEKRKEMIDKWEERWEWLKLILEVHQFARDASVAETWLL
SQEPYLSSRELGLSVDDVEKLIKRHEAFDKSALTWDERFGALQKLTTLELLELRRRQEEE
DDLERKRLSPPQPSEEFQTREAGDAHAVQNGVAAVEVESAKAAAEGADGLANGSEGRARR
ARESPPPPSPEGERRGLASPPLAPHTSASLPAKPSEVLMLPTEGFLHRKHEWEASNKKAN
SRSWNNVYCVLSTGQIAFYKDPKSAGTGVTFHSEIPLPLSGSSCEVASDYKKRKHVFKLR
LEDGNEFLFQAKDDDEMNGWINSVSTAIVGVPAEASGGAGGGGGGGDGAGDVARAQTLPA
TAVSGAGDASPGKREKDKEKRFSLFGKKK
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggccacggcggaaccgcagtacgacaatgtggagagcagccagcagcagcag
cagcagtttgtcgagacgaacaaccgctgggacctcatggaggaggactgggacaacgag
aacagctcggcgaggctgttcgagcgctcgcgcatcaaggccctcgcagacgagcgcgag
gtcgtgcagaagaagaccttcaccaagtgggtgaactcgcacctggcccgcgtctcgtgc
cgcatcagcgacctgtacctggacctgcgcgatggacgcatgctcatcaagctcctcgag
gttctgtccggggagaggctgccgaagccgaccaagggcaagatgcggatccactgcctg
gagaacgtggacaagtccctacagttcctcaaggagcagaaggtccacctggagaacatg
ggctcacacgacatcgtggacggcaatcaccgcctcatcctgggcctcatttggaccatc
atcctccgcttccagatccaggacattcacgtcgagaccgaggacaacagagagaccaag
tcggccaaggacgctctgctgctgtggtgtcagatgaaaacggccgggtacaccaacgtg
aacatccacaacttcagcacgagctggagggacggcctggccttcaacgcgctcatccac
aagcaccggcccgacctgattgactacgagcggctcaagaagtccaacgctcaccacaac
ctgcagaatgccttcaacctcgccgagcagaagctggggctcaccaagctgctcgatccc
gaagatatcaacgtggaccaaccggacgagaagtccattatcacctatgtcgtcaccttc
taccactacttctccaagatgaaggccctggccgtggagggcaaacgcattggcaaggtt
ttggacaacgccatcgagacggacaagatgatcaccaagtacgagtcgctggcctccgag
ctgctgcagtggatcgagcagaccatcatggtgctcaacaatcgcaagttcgtcaactcc
ctgacgggagtgcagcagcagctgcaggccttcaacacctaccgcacggtggagaagccg
cccaagttcatggagaaggggaacctggaggtgcagctgttcacgatccagagcaagatg
agggccaacaaccagatcgtgtacacgccgcgcgacggcaagctcatctccgacatcaac
aaggcgtgggagcggctggagaaggcggagcacgagcgggagctggcgctgcgggacgag
ctcatccgccaggagaagctggagcagctggcgcggcgcttcgatcgcaaggcggcgatg
cgcgaggcctggctcagcgagaaccagcggctcgtcgcgcaggacaacttcggcttcgac
ctgccggcggtggaggcggccacgaagaagcacgaggcgatcgagacggacatcgcggcc
tacgaggagcgcgtgctcaccgtggtggacgtggcgtgcgagctggaggcggaggactac
cacgacgtgcggcgcatcacggcccgccgggacaacgtcctccgcctttgggactacttg
ctggagctgctacgcgcccggcgccgccggctcgaagtcaatttggcgctacagcgagtc
ttccaggagatgctgcacatcatggactggatggacgagatgaaggtgcggctgctgtcc
caggaccacggcaagcacctgctgggcgtggaggacctgctgcagaagcacgcgctcgtc
gagtcggacatcggcgtgcaggcggagcgcgtgcgctccgtcaacgccaccgcgcacaag
ttcgccgacaacgatgaagcgtacaagccgtgcgacccgcagatcatcctggagcgcgtg
ggccacctcgagttctgctacggagagctggcggcgctggcggcggagcggcgcgcccgc
ctcgaggactcgcgccgcctctggcagcacctgtgggagctggaggaggacgaggcgtgg
atgcgcgagcaggagccggcgctcgcctccgccgaggtggggcgcgacctcacgtccacg
ctgcggctggcggcggctcagcgcgccctcgaggacgagatgagcgggcggcgcgcacgc
ctgtcgctcaccgtggccggcggggaggagctggcgcgccagggacacccgggcgccgac
cgcatccgtgcgcgctccgccgaggtgcaggcgcagtgggcgcgcctcgaagacctcgcc
aggctgcggcgcgagcggctgcaggaggcgctggcgctctaccagttccaggcggacgcc
gacgacatggaggcgtggatcgccgaggtgttccgcctcgtgtcgagcgacgaggtgggc
acggacgagtactcgacgcaggcgctcgtcaagaagcaccgcgacgtcaccgaggagatc
gcgcagcaccggtcggcgctggacggcctctacgagatgacgcagtcgctgccggccgag
gcggccaactcccccgagatccgcgaccgcctggagacgatcgagggcgagtaccgcgac
ctcgtggagctggcgctcgtgcgcaagcagcggctgcaggacgcgctggcgctctacacc
atgtacagcgaggcggacgcctgcgagctgtggatcgacgagaaggagaagtggcttgac
gccatagtcatccccgagcgcctggaggacctggaggtggtgcagcacaggttcgatagc
ttggagccggagatgaacgggcaagcgtcgcgcgtcgccacggtaaacgacatcgctcag
cagctcgccaacacgggtcacccgagcgagggcgacgtccgccaacgccaggacaacctc
aacaagcggtgggcgctcttccgcgagctggtggagaggaagaagggcggtctctactcg
gtgctcagcatccagaattacttcttcgaagtgaccgagaccatggcctggatccgtgag
aagaccaaggtgatcgagctgaccgccgagccgggcagcgacctcgcgggggtcatggcc
ctgcagcgcaagctcacggggatggagcgcgacctcgccgccatccaggcgaagatgggc
gacttgcagacggagtcggagcgactcattgtggagcacccggagcaggcggacgccatc
cgccagcgcctcaacgacaacctggaggtgtgggacgagctgcagcgcacgctgcactcg
cgcgaggcctcgctgggcgagacgagcaagctgcagcagttcctgcaggcgctcgacgac
ttccaggcgtggctgtcgcgcacgcagatggccatcgccagcgacgagccgccctccagc
ctgcccgaggccgagacgcagctggcgcagctcgagggcctgcgcaacgagatcgacaac
aaccaggaggagttccagcgggtgagggacatgggcgcgctgctcacgcaagacccaagc
gacccgcagcacgggcagctgcaggagcagctgaagtcactcgacgccggctgggacgac
gtccaggcgctgtgggagagccgccaccggcagctcacgcaggcgcacggcttccagacg
ttcctgcgcgacgccaagcagaccgaggtgttcctcaccaaccaggagtacgcgctgagc
cacgcggagatgccacagacgctggagggcgccgaggcagccatcaagaagcacgacaac
ttcatgaacagcatggacgccaacgacgagcgcatccacggcgtcaccgagctgggcgct
cgcctcgtcggtgacggcaacgtcaacgcggacaaggtctccgacaaggtggacaccatc
caggaatgggcgaggaggaaccgcgaggtggctggggacgtcctggtgaggctcagggac
aacagggacctccagaagttccttcaggagtgccgcgagctgacgtgctgggtgaacgag
aagatgctgacggcgcaggacacgtcgtacgacgaggccaggaacctccactccaagtgg
ctcaagcaccaggcattcatggcggagctggcctccaacaaggagtggctggagaagatc
aagaaggacggcgaagcgctggtgacggagaagcccgagacggagcccgtcgtgcgccgg
gagctcgccgagctgcagcggctgtggcgtgagctcgagtcgaccacgcaggccaaggcg
cagcgcctcttcgacgccaacaaggcggagctgttcacgcagagctgtgccgacctcgac
aagtggatcggcgagctcgagtcgcacacgcagtcggacgagtacgggaaggacctcacc
ggcgtcaacatcctgctcaagaagcaccagatgatcgagaaccagatggaggtgcgcaag
cgcgaggtggaggagctgcagacgcaggcgtcggcgctgcgccaggagggccagggctct
gacgaagcggacggcctggagcgcgtggtggtggtgaggctccaccaggtcatgcagccc
ctgcagcagcggaagggcaagctcctcgcatccaaggaggtccaccagttcaaccgcgac
ttggaggacgagattctctggatagatgatcacatgcccctggcgtcgtcgaccgaccac
gggcacaacctccagaccgtgcagctgctcatgaagaaaaaccagaccctgcagaaggag
atgcagggccacgagccgtgggtgcacgacgtgtgcgagcgcggggagcggctggcggcg
gacggcgggcccgacgcggccgaggtgcgcgagcgcatcggcacgctgcgcgacctctgg
gccaggctggcgacggaggccgagcggcggcagggccgcctgcaggaggccctgcaggcg
cagcagtactacttcgacgcggccgaggcggaggcgtggatgagcgagcaggagctgtac
atgatgggcgacgagaaggccaaggacgagcagagcgccgtggccatgctcaagaagcac
cagaacctggagcaggccgtggaggactacgcagagaacgtgcaccagctgtcggagatc
tcacggagactcatctccgacgggcaccccgagagcgagcgaatcgggctgcggcagtca
caagtggaccggctgtacgcgggcctcaaggacctggcggaggagcggcgcggccgcctg
gaggagtggcagaagctgtttgtgctcaaccgcgaggtggacgacctggagcagtggatc
gccgagcgcgaggtggtggccggctcgcacgagctcggccaggactacgaccacgtgacg
atgctgcaggaccgcttccgcgtgttcgcacgcgacacggtactcatcggccaggagcgc
gtgcaggccgccaacgagatggtggacgagatgatcgacggcggccaccccgacgccgcc
tccatcgccgattggaaggacggcctcaacgaggcgtgggccgacctcctggagctcatc
gacactcgcacgcaggtgctggcggcgtcgttcgagctgcaccgcttcctgcagcaggcg
cgcgaggtgctcggccgcgtcaccgagaagcaccagcagctgtcggacgacctgggccgc
gaccagcactcggtggagagcctccagcgcgtgcacaccgccttcgagcacgacatccag
acgctcggctcgcaggtgaagcagatcgaggaggacgcggcgcggctgcagacggcgtac
gcgggcgagaaggcggaggacatcgcgcggcgcgagcgcgaggtggcggaggcgtggcgg
gcgctgctggatgcgtgcggcgagcggcgcgtgcgcctcgtggacacggcggacaagctg
cgcttcttccgcatggtgcgcgacctcctgctctggatggagggcgtgcggcgacagatc
gacgcgcaggagagcccccgggatgtgtcgtccgtggagctgctcatgaacagccaccag
ggcatcaaggccgagatcgacacccgcaacgacagcttcgccgcctgcgtcgagctgggc
caggcgctgctgcagcgccagcacttcgcttccgcagagatcagtgagaaactgatggag
ctgacggagaagaggaaggagatgattgacaagtgggaggagcgatgggagtggctcaag
ctcatcctggaggtgcaccagtttgcccgcgacgcgtccgtggccgagacgtggctgctg
agccaggagccgtacctgtcgagccgcgagcttggcctcagcgtggacgacgtggagaag
ctcatcaagcggcacgaggccttcgacaagtcggcgctcacttgggacgagcgcttcggg
gcgctgcagaaactcacgacgctggagctgctggagttgcgtcgtcggcaggaggaggag
gatgacctggagaggaagagactctcacctcctcaacccagcgaggaattccagaccaga
gaagctggagatgcgcatgccgtgcaaaacggagtcgcggcggtcgaagtcgagtcggca
aaggcggccgcggaaggtgcggacgggctggcgaacggctccgaaggccgggcgcggagg
gcgagggagagccccccgccgccatcgcccgagggggagaggaggggcctcgcgtcgccg
ccgctggcgccgcacacctcggcgagcctcccggccaagcccagcgaggtgctcatgctg
cccacggagggcttcctgcaccgcaagcacgagtgggaggcgagcaacaagaaggccaac
agcaggtcatggaacaacgtgtactgcgtgctgagcaccggtcagatcgctttctacaag
gaccccaagagcgccggcacgggggtcacgtttcacagcgagatccccctacctctgtcg
ggctcctcgtgcgaggtggcatccgactacaagaagcgcaagcatgtcttcaagctgcgg
ctcgaggatggaaatgaattcctgttccaagccaaggatgatgacgagatgaacggctgg
atcaacagcgtgagcactgccatcgtcggggtgccggcggaggcgagcggcggcgccggc
ggcggcggtggcggcggcgacggtgcaggcgacgtggcacgggcgcagacgctgcctgcg
acggccgtgagcggcgccggcgacgccagccccggcaagcgcgagaaggacaaggaaaag
cgcttcagcctgttcggcaagaagaaatga
DBGET
integrated database retrieval system
