Lethenteron reissneri (Far Eastern brook lamprey): 133342265
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Entry
133342265 CDS
T09663
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04517
IgSF CAM signaling
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133342265
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133342265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133342265
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133342265
Intermediate filaments
Intermediate filament-binding proteins
133342265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Sec3_CC
DYH2-5-8_CC
COG3_N
Motif
Other DBs
NCBI-GeneID:
133342265
NCBI-ProteinID:
XP_061407297
LinkDB
All DBs
Position
14:3711441..3865016
Genome browser
AA seq
2369 aa
AA seq
DB search
MMSATAEPQYDNVESSQQQQQQFVETNNRWDLMEEDWDNENSSARLFERSRIKALADERE
VVQKKTFTKWVNSHLARVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGKMRIHCL
ENVDKSLQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIHVETEDNRETK
SAKDALLLWCQMKTAGYTNVNIHNFSTSWRDGLAFNALIHKHRPDLIDYERLKKSNAHHN
LQNAFNLAEQKLGLTKLLDPEDINVDQPDEKSIITYVVTFYHYFSKMKALAVEGKRIGKV
LDNAIETDKMITKYESLASELLQWIEQTIMVLNNRKFVNSLTGVQQQLQAFNTYRTVEKP
PKFMEKGNLEVQLFTIQSKMRANNQIVYTPRDGKLISDINKAWERLEKAEHERELALRDE
LIRQEKLEQLARRFDRKAAMREAWLSENQRLVAQDNFGFDLPAVEAATKKHEAIETDIAA
YEERVLTVVDVACELEAEDYHDVRRITARRDNVLRLWDYLLELLRARRRRLEVNLALQRV
FQEMLHIMDWMDEMKVRLLSQDHGKHLLGVEDLLQKHALVESDIGVQAERVRSVNATAHK
FADNDEAYKPCDPQIILERVGHLEFCYGELAALAAERRARLEDSRRLWQHLWELEEDEAW
MREQEPALASAEVGRDLTSTLRLAAAQRALEDEMSGRRARLSLTVAGGEELARQGHPGAD
RIRARSAEVQAQWARLEDLARLRRERLQEALALYQFQADADDMEAWIAEVFRLVSSDEVG
TDEYSTQALVKKHRDVTEEIAQHRSALDGLYEMTQSLPAEAANSPEIRDRLETIEGEYRD
LVELALVRKQRLQDALALYTMYSEADACELWIDEKEKWLDAIVIPERLEDLEVVQHRFDS
LEPEMNGQASRVATVNDIAQQLANTGHPSEGDVRQRQDNLNKRWALFRELVERKKGGLYS
VLSIQNYFFEVTETMAWIREKTKVIELTAEPGSDLAGVMALQRKLTGMERDLAAIQAKMG
DLQTESERLIVEHPEQADAIRQRLNDNLEVWDELQRTLHSREASLGETSKLQQFLQALDD
FQAWLSRTQMAIASDEPPSSLPEAETQLAQLEGLRNEIDNNQEEFQRVRDMGALLTQDPS
DPQHGQLQEQLKSLDAGWDDVQALWESRHRQLTQAHGFQTFLRDAKQTEVFLTNQEYALS
HAEMPQTLEGAEAAIKKHDNFMNSMDANDERIHGVTELGARLVGDGNVNADKVSDKVDTI
QEWARRNREVAGDVLVRLRDNRDLQKFLQECRELTCWVNEKMLTAQDTSYDEARNLHSKW
LKHQAFMAELASNKEWLEKIKKDGEALVTEKPETEPVVRRELAELQRLWRELESTTQAKA
QRLFDANKAELFTQSCADLDKWIGELESHTQSDEYGKDLTGVNILLKKHQMIENQMEVRK
REVEELQTQASALRQEGQGSDEADGLERVVVVRLHQVMQPLQQRKGKLLASKEVHQFNRD
LEDEILWIDDHMPLASSTDHGHNLQTVQLLMKKNQTLQKEMQGHEPWVHDVCERGERLAA
DGGPDAAEVRERIGTLRDLWARLATEAERRQGRLQEALQAQQYYFDAAEAEAWMSEQELY
MMGDEKAKDEQSAVAMLKKHQNLEQAVEDYAENVHQLSEISRRLISDGHPESERIGLRQS
QVDRLYAGLKDLAEERRGRLEEWQKLFVLNREVDDLEQWIAEREVVAGSHELGQDYDHVT
MLQDRFRVFARDTVLIGQERVQAANEMVDEMIDGGHPDAASIADWKDGLNEAWADLLELI
DTRTQVLAASFELHRFLQQAREVLGRVTEKHQQLSDDLGRDQHSVESLQRVHTAFEHDIQ
TLGSQVKQIEEDAARLQTAYAGEKAEDIARREREVAEAWRALLDACGERRVRLVDTADKL
RFFRMVRDLLLWMEGVRRQIDAQESPRDVSSVELLMNSHQGIKAEIDTRNDSFAACVELG
QALLQRQHFASAEISEKLMELTEKRKEMIDKWEERWEWLKLILEVHQFARDASVAETWLL
SQEPYLSSRELGLSVDDVEKLIKRHEAFDKSALTWDERFGALQKLTTLELLELRRRQEEE
DDLERKRLSPPQPSEEFQTREAGDAHAVQNGVAAVEVESAKAAAEGADGLANGSEGRARR
ARESPPPPSPEGERRGLASPPLAPHTSASLPAKPSEVLMLPTEGFLHRKHEWEASNKKAN
SRSWNNVYCVLSTGQIAFYKDPKSAGTGVTFHSEIPLPLSGSSCEVASDYKKRKHVFKLR
LEDGNEFLFQAKDDDEMNGWINSVSTAIVGVPAEASGGAGGGGGGGDGAGDVARAQTLPA
TAVSGAGDASPGKREKDKEKRFSLFGKKK
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggccacggcggaaccgcagtacgacaatgtggagagcagccagcagcagcag
cagcagtttgtcgagacgaacaaccgctgggacctcatggaggaggactgggacaacgag
aacagctcggcgaggctgttcgagcgctcgcgcatcaaggccctcgcagacgagcgcgag
gtcgtgcagaagaagaccttcaccaagtgggtgaactcgcacctggcccgcgtctcgtgc
cgcatcagcgacctgtacctggacctgcgcgatggacgcatgctcatcaagctcctcgag
gttctgtccggggagaggctgccgaagccgaccaagggcaagatgcggatccactgcctg
gagaacgtggacaagtccctacagttcctcaaggagcagaaggtccacctggagaacatg
ggctcacacgacatcgtggacggcaatcaccgcctcatcctgggcctcatttggaccatc
atcctccgcttccagatccaggacattcacgtcgagaccgaggacaacagagagaccaag
tcggccaaggacgctctgctgctgtggtgtcagatgaaaacggccgggtacaccaacgtg
aacatccacaacttcagcacgagctggagggacggcctggccttcaacgcgctcatccac
aagcaccggcccgacctgattgactacgagcggctcaagaagtccaacgctcaccacaac
ctgcagaatgccttcaacctcgccgagcagaagctggggctcaccaagctgctcgatccc
gaagatatcaacgtggaccaaccggacgagaagtccattatcacctatgtcgtcaccttc
taccactacttctccaagatgaaggccctggccgtggagggcaaacgcattggcaaggtt
ttggacaacgccatcgagacggacaagatgatcaccaagtacgagtcgctggcctccgag
ctgctgcagtggatcgagcagaccatcatggtgctcaacaatcgcaagttcgtcaactcc
ctgacgggagtgcagcagcagctgcaggccttcaacacctaccgcacggtggagaagccg
cccaagttcatggagaaggggaacctggaggtgcagctgttcacgatccagagcaagatg
agggccaacaaccagatcgtgtacacgccgcgcgacggcaagctcatctccgacatcaac
aaggcgtgggagcggctggagaaggcggagcacgagcgggagctggcgctgcgggacgag
ctcatccgccaggagaagctggagcagctggcgcggcgcttcgatcgcaaggcggcgatg
cgcgaggcctggctcagcgagaaccagcggctcgtcgcgcaggacaacttcggcttcgac
ctgccggcggtggaggcggccacgaagaagcacgaggcgatcgagacggacatcgcggcc
tacgaggagcgcgtgctcaccgtggtggacgtggcgtgcgagctggaggcggaggactac
cacgacgtgcggcgcatcacggcccgccgggacaacgtcctccgcctttgggactacttg
ctggagctgctacgcgcccggcgccgccggctcgaagtcaatttggcgctacagcgagtc
ttccaggagatgctgcacatcatggactggatggacgagatgaaggtgcggctgctgtcc
caggaccacggcaagcacctgctgggcgtggaggacctgctgcagaagcacgcgctcgtc
gagtcggacatcggcgtgcaggcggagcgcgtgcgctccgtcaacgccaccgcgcacaag
ttcgccgacaacgatgaagcgtacaagccgtgcgacccgcagatcatcctggagcgcgtg
ggccacctcgagttctgctacggagagctggcggcgctggcggcggagcggcgcgcccgc
ctcgaggactcgcgccgcctctggcagcacctgtgggagctggaggaggacgaggcgtgg
atgcgcgagcaggagccggcgctcgcctccgccgaggtggggcgcgacctcacgtccacg
ctgcggctggcggcggctcagcgcgccctcgaggacgagatgagcgggcggcgcgcacgc
ctgtcgctcaccgtggccggcggggaggagctggcgcgccagggacacccgggcgccgac
cgcatccgtgcgcgctccgccgaggtgcaggcgcagtgggcgcgcctcgaagacctcgcc
aggctgcggcgcgagcggctgcaggaggcgctggcgctctaccagttccaggcggacgcc
gacgacatggaggcgtggatcgccgaggtgttccgcctcgtgtcgagcgacgaggtgggc
acggacgagtactcgacgcaggcgctcgtcaagaagcaccgcgacgtcaccgaggagatc
gcgcagcaccggtcggcgctggacggcctctacgagatgacgcagtcgctgccggccgag
gcggccaactcccccgagatccgcgaccgcctggagacgatcgagggcgagtaccgcgac
ctcgtggagctggcgctcgtgcgcaagcagcggctgcaggacgcgctggcgctctacacc
atgtacagcgaggcggacgcctgcgagctgtggatcgacgagaaggagaagtggcttgac
gccatagtcatccccgagcgcctggaggacctggaggtggtgcagcacaggttcgatagc
ttggagccggagatgaacgggcaagcgtcgcgcgtcgccacggtaaacgacatcgctcag
cagctcgccaacacgggtcacccgagcgagggcgacgtccgccaacgccaggacaacctc
aacaagcggtgggcgctcttccgcgagctggtggagaggaagaagggcggtctctactcg
gtgctcagcatccagaattacttcttcgaagtgaccgagaccatggcctggatccgtgag
aagaccaaggtgatcgagctgaccgccgagccgggcagcgacctcgcgggggtcatggcc
ctgcagcgcaagctcacggggatggagcgcgacctcgccgccatccaggcgaagatgggc
gacttgcagacggagtcggagcgactcattgtggagcacccggagcaggcggacgccatc
cgccagcgcctcaacgacaacctggaggtgtgggacgagctgcagcgcacgctgcactcg
cgcgaggcctcgctgggcgagacgagcaagctgcagcagttcctgcaggcgctcgacgac
ttccaggcgtggctgtcgcgcacgcagatggccatcgccagcgacgagccgccctccagc
ctgcccgaggccgagacgcagctggcgcagctcgagggcctgcgcaacgagatcgacaac
aaccaggaggagttccagcgggtgagggacatgggcgcgctgctcacgcaagacccaagc
gacccgcagcacgggcagctgcaggagcagctgaagtcactcgacgccggctgggacgac
gtccaggcgctgtgggagagccgccaccggcagctcacgcaggcgcacggcttccagacg
ttcctgcgcgacgccaagcagaccgaggtgttcctcaccaaccaggagtacgcgctgagc
cacgcggagatgccacagacgctggagggcgccgaggcagccatcaagaagcacgacaac
ttcatgaacagcatggacgccaacgacgagcgcatccacggcgtcaccgagctgggcgct
cgcctcgtcggtgacggcaacgtcaacgcggacaaggtctccgacaaggtggacaccatc
caggaatgggcgaggaggaaccgcgaggtggctggggacgtcctggtgaggctcagggac
aacagggacctccagaagttccttcaggagtgccgcgagctgacgtgctgggtgaacgag
aagatgctgacggcgcaggacacgtcgtacgacgaggccaggaacctccactccaagtgg
ctcaagcaccaggcattcatggcggagctggcctccaacaaggagtggctggagaagatc
aagaaggacggcgaagcgctggtgacggagaagcccgagacggagcccgtcgtgcgccgg
gagctcgccgagctgcagcggctgtggcgtgagctcgagtcgaccacgcaggccaaggcg
cagcgcctcttcgacgccaacaaggcggagctgttcacgcagagctgtgccgacctcgac
aagtggatcggcgagctcgagtcgcacacgcagtcggacgagtacgggaaggacctcacc
ggcgtcaacatcctgctcaagaagcaccagatgatcgagaaccagatggaggtgcgcaag
cgcgaggtggaggagctgcagacgcaggcgtcggcgctgcgccaggagggccagggctct
gacgaagcggacggcctggagcgcgtggtggtggtgaggctccaccaggtcatgcagccc
ctgcagcagcggaagggcaagctcctcgcatccaaggaggtccaccagttcaaccgcgac
ttggaggacgagattctctggatagatgatcacatgcccctggcgtcgtcgaccgaccac
gggcacaacctccagaccgtgcagctgctcatgaagaaaaaccagaccctgcagaaggag
atgcagggccacgagccgtgggtgcacgacgtgtgcgagcgcggggagcggctggcggcg
gacggcgggcccgacgcggccgaggtgcgcgagcgcatcggcacgctgcgcgacctctgg
gccaggctggcgacggaggccgagcggcggcagggccgcctgcaggaggccctgcaggcg
cagcagtactacttcgacgcggccgaggcggaggcgtggatgagcgagcaggagctgtac
atgatgggcgacgagaaggccaaggacgagcagagcgccgtggccatgctcaagaagcac
cagaacctggagcaggccgtggaggactacgcagagaacgtgcaccagctgtcggagatc
tcacggagactcatctccgacgggcaccccgagagcgagcgaatcgggctgcggcagtca
caagtggaccggctgtacgcgggcctcaaggacctggcggaggagcggcgcggccgcctg
gaggagtggcagaagctgtttgtgctcaaccgcgaggtggacgacctggagcagtggatc
gccgagcgcgaggtggtggccggctcgcacgagctcggccaggactacgaccacgtgacg
atgctgcaggaccgcttccgcgtgttcgcacgcgacacggtactcatcggccaggagcgc
gtgcaggccgccaacgagatggtggacgagatgatcgacggcggccaccccgacgccgcc
tccatcgccgattggaaggacggcctcaacgaggcgtgggccgacctcctggagctcatc
gacactcgcacgcaggtgctggcggcgtcgttcgagctgcaccgcttcctgcagcaggcg
cgcgaggtgctcggccgcgtcaccgagaagcaccagcagctgtcggacgacctgggccgc
gaccagcactcggtggagagcctccagcgcgtgcacaccgccttcgagcacgacatccag
acgctcggctcgcaggtgaagcagatcgaggaggacgcggcgcggctgcagacggcgtac
gcgggcgagaaggcggaggacatcgcgcggcgcgagcgcgaggtggcggaggcgtggcgg
gcgctgctggatgcgtgcggcgagcggcgcgtgcgcctcgtggacacggcggacaagctg
cgcttcttccgcatggtgcgcgacctcctgctctggatggagggcgtgcggcgacagatc
gacgcgcaggagagcccccgggatgtgtcgtccgtggagctgctcatgaacagccaccag
ggcatcaaggccgagatcgacacccgcaacgacagcttcgccgcctgcgtcgagctgggc
caggcgctgctgcagcgccagcacttcgcttccgcagagatcagtgagaaactgatggag
ctgacggagaagaggaaggagatgattgacaagtgggaggagcgatgggagtggctcaag
ctcatcctggaggtgcaccagtttgcccgcgacgcgtccgtggccgagacgtggctgctg
agccaggagccgtacctgtcgagccgcgagcttggcctcagcgtggacgacgtggagaag
ctcatcaagcggcacgaggccttcgacaagtcggcgctcacttgggacgagcgcttcggg
gcgctgcagaaactcacgacgctggagctgctggagttgcgtcgtcggcaggaggaggag
gatgacctggagaggaagagactctcacctcctcaacccagcgaggaattccagaccaga
gaagctggagatgcgcatgccgtgcaaaacggagtcgcggcggtcgaagtcgagtcggca
aaggcggccgcggaaggtgcggacgggctggcgaacggctccgaaggccgggcgcggagg
gcgagggagagccccccgccgccatcgcccgagggggagaggaggggcctcgcgtcgccg
ccgctggcgccgcacacctcggcgagcctcccggccaagcccagcgaggtgctcatgctg
cccacggagggcttcctgcaccgcaagcacgagtgggaggcgagcaacaagaaggccaac
agcaggtcatggaacaacgtgtactgcgtgctgagcaccggtcagatcgctttctacaag
gaccccaagagcgccggcacgggggtcacgtttcacagcgagatccccctacctctgtcg
ggctcctcgtgcgaggtggcatccgactacaagaagcgcaagcatgtcttcaagctgcgg
ctcgaggatggaaatgaattcctgttccaagccaaggatgatgacgagatgaacggctgg
atcaacagcgtgagcactgccatcgtcggggtgccggcggaggcgagcggcggcgccggc
ggcggcggtggcggcggcgacggtgcaggcgacgtggcacgggcgcagacgctgcctgcg
acggccgtgagcggcgccggcgacgccagccccggcaagcgcgagaaggacaaggaaaag
cgcttcagcctgttcggcaagaagaaatga
DBGET
integrated database retrieval system
