Lethenteron reissneri (Far Eastern brook lamprey): 133342497
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Entry
133342497 CDS
T09663
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
133342497 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
133342497 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
AAA_16
DUF4062
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_CAF1B_HIR1
NACHT
AAA_22
Beta-prop_WDR75_1st
nSTAND1
Beta-prop_Nup120_160
NPHP3
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
AAA_30
DUF7165
ATPase_2
Beta-prop_EIPR1
Beta-prop_SPT8
AAA_33
AAA_28
Beta-prop_Vps41
AAA_7
AAA_35
AAA_11
Motif
Other DBs
NCBI-GeneID:
133342497
NCBI-ProteinID:
XP_061407635
LinkDB
All DBs
Position
15:complement(11339122..11376653)
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AA seq
1822 aa
AA seq
DB search
MKKAWQKWGHKRALVRGRLGVQLPEASNLVRVFLSSTFSDMQTERDTLLDKAYPELQAFC
QERGLTFEVVDMRWGVRDTVAVDHMTTELCLREIESCQKTSVGPTFVALLGNRYGYRPLP
RTIPEAEMEALRGCSTREETEQLDAWFWRDANAEPPLFLLQPITALLPHFDDQDPSRAEL
QARDAALWRDAESRLSDILRRSAGAAMRKGLLSAERYHAYLCSVTEAEIEMGVLSPPPPA
RGGGGAPNPPTRPHRAAECCSVFVREARGVAACVPASERARVFVDAERGPDGAFRVDAEA
QALLRSLKRRLRAHGSGGGVRGPPAGSENAPRARLVVYQVEWSEGMVDSAVESHRRYLDS
VCRTFTAELKRQITRCVEAARRAQAPDDRLLQELGHHAAQCERKSRGLCGRAALMATLWS
RLHDRRRAAGGHSPVVVFGPSGTGKTSVLAELVRQAPEQLGEEVVVAARLLGTSPLSSDI
HAVLRGLCLQLCLAYERERPPAHVLNVYADTVRFFHRLLTSLGEQPQAPPLLLVLDSLDQ
LSGADGAHRLHWLPKRYAASVLVVVSTLPSEHGILDALRAAVHDAAAYLEVEPLMPENGG
EMMDGLLRAAGRTLAGEQRALLLSAFARCGQPLFVRLAFDEARRWRSFAPLGLELRGRVA
SDTREAVHALYARLEAQHGRALVAHALGFVVASRSGLSELELKDCLSLDDAVLADVYQYW
SPPNRDMVRLPPLLWTRLRHDLADYLVDRQADGHTVIALYHRQFVEAVLERYLQGEERRL
LHQTLADYFSGSWAGGRRKTIHLSQRGEVLHADRKVAAQPLRFGEDKVNLRKLSELPFHL
AHAGRHQQLREEIFGSVEWLSLKLSALGVKALLEDFALALELQPCAETQLVHDAVLLIRP
TLEFMENGVDESVFFVELLARLEYFERQYPAMVGRLCAQCRQLCQTRPEPILLPLSGCLQ
PPGGPLRTTLTGFGQGVSVLALSASGRVMAAGSLDGTIIVWDLQEDEATHTLAGHAGEVL
SLVLGRRADLLVSFGRDSTARVWSLVTGKQVTLVSTAPAGPNGPNGPSGPSGSPGPTGPA
GPTAAAAATSGKEEEEEVSYSLIVVSEEREEFHLFTNSTLRSFSLWSGAPLLSEPLGGPS
RCHALGGDGEGAVAVVTAAAGGGDGGVRVSLVEPGAGLLKRRLDAWVPGPAGPAGRPVCV
AVAGRGLLLAGLAGGTLVTVSLEDGGSCRGTEALGAEPRFIAVSPDCTLAAVGVDKRVCV
FDLRGAGEAPARRAVEPRHQDRVEAAVFSGCTALISASLDETIKVWDLRDGLSLRECIEG
MGMAVTALCLAADGILVSASRQAYYLKVWDVGERRLRGGDPGGGSAGGLLSPPFHDRSGL
VALTVDAATVVLQDMEEASRVVLWDTRTGAPRQLVSCPAHVTSVECARGRDLILVGLSSG
LVLALTPQLDSAESAGEGAVPPADAPWAVAAELGVAGAVSVTCLALGDGDSRLAVGLSSN
RVAVHCTKTWRRECVLQAPCRGALSAVALLPGLAGAMWGSDSGQLGIALRGPPVPAGTGD
REPAASVPEGSSRTKDRADDDGGGGGGVGDGGERCVELEGYGTRVSCVLLSPGGRYAFAG
CDGTLQRLWCARTWQVLHEYTYQGAFYQGVTSAAFSPEERFLFTGSRDRSIKVWCVVTGI
LLKVQYVYATVTRLVAMETRGGPSGEELGPEARPAWACVVLACTRLGYVLRLEFRCPPRL
ALGYDPLRYIKASSSVRSCRPSAPGGACREQPEAAARAEWTRGLQDEDGGDGGVGAAGTT
RGQEEATGPGRRGGSSRTCALL
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcctggcagaaatggggccacaagagagccctggtgcgtggccgcctcggg
gtgcagctgccggaggcttccaacctcgtgcgcgtcttcctcagctccaccttctcggac
atgcagacggagagagacacgctcctggacaaggcctaccccgagctgcaggccttctgc
caagagcggggcctcaccttcgaggtggtagacatgcgctggggagtacgtgacacggtg
gcggtggaccacatgaccacggagctttgtctgcgggagatcgagagctgccagaagacg
tctgtgggccccaccttcgtggccctgctggggaaccgctacggctaccgaccgctcccg
cgcaccatccccgaggcggagatggaggcgctgcgcggctgctcgacccgcgaggagacg
gagcagctggacgcgtggttctggcgggacgccaacgcggagccgccgctcttcctgctc
cagccaatcaccgccctgctgccgcacttcgacgaccaggacccctcgcgggccgagtta
caggcgcgggacgcggcgctctggagagacgcggagtcccgcctctcggacatcctgaga
cgcagcgcgggtgccgccatgcgcaagggtctcctctccgcagagagataccacgcgtac
ctctgctcagtcaccgaggcggagatagagatgggcgtgctgagcccccccccgccggca
cggggcggggggggcgcccccaacccccccacccgcccccaccgtgcggccgagtgttgc
tccgtgttcgtgcgcgaggcccgcggggtggccgcgtgcgtgcccgcgagcgagcgcgcc
cgcgtcttcgtggacgccgagcgcggccccgacggggccttccgcgtcgacgccgaggcg
caggcgctgctgcgctcgctcaagcgccgactgcgagcgcacggcagtggcggcggcgtc
cggggccccccggcgggatccgagaacgccccccgcgcccgcctcgtggtgtaccaggtg
gagtggagcgagggcatggtggactcggccgtggagtcgcaccgccgctacctggacagc
gtctgccgcacgttcaccgcggagctgaagcggcagatcacgcggtgcgtggaggcggcg
cggcgggcgcaggcgccggacgaccgcctgctgcaggagctgggacaccacgcggcgcag
tgcgagcgcaagtcccggggcctgtgcggccgcgcggcgctgatggccacgctgtggtca
cgtttgcacgatcggcggcgcgcagccggaggacattccccggtggtggtgttcggaccg
tcgggcaccggcaagacgtcggtgctggccgagttggtgcgccaggcgcccgagcagctg
ggcgaggaggtggtggtggcggcgcgcctgctggggacgtcgccgctcagctcggacatc
cacgcggtgctgcggggcctctgcctgcagctgtgcctcgcctacgagcgcgagcggccg
cctgcacacgtgctcaacgtctacgcggacaccgtgcggttcttccaccggcttctgacg
agcttgggcgagcagccgcaggcgccgccgctgctgctggtgctggactcgctggaccag
ctgtcgggcgcggacggtgcccaccgcctgcactggctgcccaagcgctacgcggcgagc
gtgctcgtggtcgtctccacgctgcccagcgagcacggcatcctggacgcgctgcgcgcc
gccgtgcacgacgcggccgcgtacctcgaggtcgagcctctgatgccggagaacggcggc
gagatgatggatgggctcctgcgggcggcgggccgcacgctggcgggcgagcagcgcgcc
ctgctgctctcggcgttcgcccgctgcgggcagccgctcttcgtgcgcctggcgttcgac
gaggcgcgccgctggcgctcgttcgcgccgctcggcctcgagctgcgcggccgcgtggcg
agcgacacgagggaggcggtgcacgcgctgtacgcgcgcctcgaggcgcagcacgggcgc
gcgctcgtggcccacgcgctgggcttcgtggtggcctccaggagcggcctctcggagctg
gagctcaaggactgcctctcgctggacgacgcggtgctggccgacgtctaccagtactgg
tctccgcccaaccgcgacatggtgcgcctgccgcctctgctgtggacgcgcctgcgccac
gacctcgccgactacctggtggaccggcaggcggacgggcacaccgtcatcgcgctctac
cacaggcagtttgtggaggcggtgctggagcgctacctgcagggcgaggagcgccgcctg
ctgcaccagacgctcgccgactactttagcggcagctgggccgggggccggcgcaagacg
atccacctgagccagcgcggggaggtgctgcacgcggaccgcaaggtcgccgcccagccg
ctacgatttggcgaggacaaggtgaacctgcgcaagctgagcgagctgccgttccacctg
gcgcacgcggggcgccaccagcagctgcgggaggagatattcggcagcgtggagtggctg
tcgctgaagctgagcgcgctgggcgtgaaggcgctgctggaggactttgccctggcgctg
gagctgcagccgtgcgccgagacgcagctggtgcacgacgccgtgctgctcatccggccc
acgctcgagttcatggagaacggcgtcgacgagtcggtcttcttcgtcgagctgctggct
cgcctcgagtacttcgagcggcagtacccggccatggtggggcggctgtgcgcgcagtgc
cgccagctgtgccagacgcggccggagcccatcctgctgccgctctcgggctgcctgcag
cctccgggagggcctctccgcaccacgctcacgggcttcggccagggcgtctcggtgctg
gctctgagcgccagcgggagggtgatggccgcgggctctctggacggcaccatcatcgtg
tgggacctacaggaggacgaggccacccacacgctcgccgggcacgcgggcgaagtgctg
tccttggtgctgggccgccgggccgacctgctggtgtcgttcgggcgtgactcgacggcg
cgcgtgtggagcctcgtcacggggaagcaggtgacgctcgtgtccacggcgcccgccggc
cccaacggccccaacggtcccagcggccccagcggctccccaggccccaccggccccgcc
ggccccaccgccgccgccgccgccacctcaggcaaggaggaggaggaggaggtgtcgtac
agcctcatcgttgtgagcgaggagcgggaggagttccacctcttcactaactccacgctc
cgctcgttctccctgtggagcggagcgccgctcctatcggagccgctgggcggcccgtcg
cgctgccacgcgctcggcggggacggcgagggcgccgtggcggtggtgaccgcggcagcg
ggcggcggcgacggcggcgtgcgcgtgagcctcgtggagccgggcgccggcttgctgaag
cggcgtctggacgcgtgggtgccggggccggcgggccctgcggggcgccccgtgtgcgtg
gccgtggccgggcgcggcctcctcctggccggcttggccggtggcacgcttgtcacggtg
tcgctggaggacggcggtagctgccggggcaccgaggcgctgggagccgagcccaggttc
attgccgtgagccccgactgcacgctcgccgccgtcggagtggacaagcgcgtgtgcgtg
ttcgacctgcggggcgccggcgaggcccccgcgcgccgcgccgtcgagccgcgccaccag
gaccgcgtggaggccgccgtcttctcgggctgcacggccctcatcagcgcctcgctggac
gagaccatcaaggtgtgggacctgcgggacgggctctcgctgcgcgagtgcattgagggg
atgggcatggccgtcacggcgctgtgcctcgccgccgacggaatcttggtgtcggcgtcg
cgccaggcttactacctcaaggtgtgggacgtgggtgagaggcgcctgcgtggcggggac
cccgggggcggcagcgccggggggctcctgagccccccgttccacgaccgcagcggcctc
gtggccctcacggtagacgcggccaccgtggtgctgcaggacatggaggaggcgtcgcga
gttgtcctgtgggacacgcgcacaggagcgccgcgccagctcgtgagctgcccggcgcac
gtgacgagcgtggagtgtgcgcggggtcgcgacctcatcctcgtcggcctcagctcaggc
ctcgtgctggcgctcactccacagctggactccgcggagagcgccggagagggggccgtg
ccccccgccgacgcgccgtgggccgtggcggccgagctgggggtggccggggcggtgagt
gtcacgtgcttggcgctgggggacggggactcgcgcctggccgtgggcctctcttccaac
cgcgtcgccgtgcactgcacaaagacgtggcgccgcgagtgcgtgctgcaggcaccgtgc
cgcggggctctgagcgccgtggcgctgctgcccgggctggccggcgcaatgtggggcagc
gactcggggcagctgggcatcgcgctgcggggaccgcccgtgcccgccggcacaggcgac
cgggagccggcggcgtcggtccccgagggatcgtcccggaccaaggaccgcgctgacgac
gacggcggcggcggcggcggcgtaggagacggcggagagcgttgcgtggagctggagggc
tacggcacgcgcgtctcgtgcgtgctgctgagccccggcgggcgatatgccttcgcgggc
tgcgatgggacgctgcagcggctgtggtgcgcgcgcacctggcaggtgctgcacgagtac
acgtaccagggagctttctaccagggcgtcacctctgccgccttctcccccgaggagcgg
ttcctgttcaccggctcgcgcgaccgctccatcaaggtgtggtgcgtcgtgactggcatc
ctgctgaaggtgcagtacgtgtacgcgacggtgacgcgcttggtcgccatggagacgcgg
ggagggccctcgggcgaggaactggggcccgaggcgcggccggcgtgggcctgcgtggtg
ctggcctgcacgcgcctcggatacgtcctgcgtctcgagttccgctgccccccgcgcctc
gccctggggtacgaccccctgcgctacatcaaagcgtcgtccagcgtgcgctcctgcagg
cccagcgccccgggcggcgcgtgccgggagcagccggaggccgccgcgcgggccgagtgg
acgcgggggctgcaggatgaggacggcggcgacggcggcgttggggccgcggggaccacg
agggggcaggaggaggccacggggccgggcagacgcggcggctcgtcgcgcacctgcgcc
ttgctctga
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