Lethenteron reissneri (Far Eastern brook lamprey): 133342499
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Entry
133342499 CDS
T09663
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2-like isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133342499
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133342499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
DEAD
SLIDE
DUF6511
Motif
Other DBs
NCBI-GeneID:
133342499
NCBI-ProteinID:
XP_061407671
LinkDB
All DBs
Position
1:8136737..8193565
Genome browser
AA seq
2032 aa
AA seq
DB search
MARRRRRTPSLAPMLVVHEAGSRDKSTEERPASPPGSPQGDTATAATTATTTPSSSSTLN
ISTISATAASDDDDEEASNNNNNDNNNSNASSSAASEDDNQSASGSESGSQSESGDDSGS
QSESSSGGSGGSGGSGGSGSEGATSRGDGSPGQRQNRRPSRKERLADVKKMWEEFPDVYG
VRRSNRSRQEPSRLDVSRVEEGTSDDDSEVDSPKQKGRAKRRPDEDWQASGTGDDGVEEE
EEEEEEEDDSSEGSASDYEPQNKVRSRRPPPKPPARPPTRRGTPKKTPKKRKKSESSDDE
DDVTPKRQSRRQATVNVSYKEDDDEETDSDDIIEVTETAQQAESEEFEMIERVIDCRVGR
KTAVGAATTIYAVEADGDPNAGFLPGEDATAAKAATTAAASAATSTATAAATTTTKTPAD
STEATAATDGGDAGADADADGGSVPADGASGASGGGIQYLIKWKGWSHIHNTWESEDTLR
QQKVRGIKKVENFQKKDEEISQWLSMASPEDAEYYSCQREMSADLYKQYCVVERVIAMKT
SKSAPSHTDSSLSHVGHKSTSGHPDYLCKWQGLPYAECSWEDGALISRKFQHCIDGYMAN
LRSKTLPTKECKALKQRPRFVALKDQPPFVGGVDCLELRDYQLDGLNWLAHSWCKGNSVI
LADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLG
DMSSRNVIREYEWIHQQTKKLKFNALVTTYEILLKDKTVLGAVNWAFLGVDEAHRLKNDD
SLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDKFSAWEDFDAVHGSGSDNGY
VSLHKELEPFLLRRVKKDVERSLPAKVEQILRVEMTPQQKHYYKWILTRNFKALSKGTRG
STSGFLNIMMELKKCCNHCYLIKLPEDENGDKHDILQSLVRSSGKLILLDKLLCRLRETG
HRVLIFSQMVRMLDILADYLAMKHFPFQRLDGSIKNEQRKQALDHFNAEGSEDFCFLLST
RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIE
RAKKKMVLDHLVIQRMDTTGKTVLQKGSAPSSSTPFNKEELASILKFGAEELFKEGEAEE
QDSQQEMDIDEILRRAETRENDDSSLPTAGEELLSQFKVANFATMDEEGQELKDALAVRS
WDEIIPEEHWKRVEEEERQKELLEICMLPRMRTKKPVHVNGSDSDASCRRRRGKRRSSGS
ESDSDDSGDDKKPRKRGRPRTVPRDTVQGFTDSEIRRFIKSYKRFGAPLERLDAIARDAE
LGDKSAADLKRLGELIHRGCEEAMQEQADGKVDGGGRGKKRGPAFRLSGVQVNAKSLLAH
EEEFLPLHQAIPSDPEQRKRYRLSSRAKAAHFDSEWGVEEDSNLLVGIHEYGYGNWELVK
MDPDLNLTDKILPDDPELKPQAKQLQTRADYLVKLLKKEMLRREALKPAAQATNKKPRRV
HAKKARKGGARGGDAGQPDGTSGGSPRAAEHASEEEGEIKDDGGEKKKKKKREKENKEKG
ADGKEARRGKKEKREKKEKPRTGKGAEGGGRADGKSGERGTRAGAKASIPQGPVHITAGS
EPVLIATETEEELDQKTFSICKERMRPVKKALKQLDKPEEGLSEREQLLHTRHCLLRIGD
HISECLQKHADPEIVKQWRRNLWIFVSKFTEFDARKLHKLYKHAVKKRAEEAGSEQPKAR
QEKQNFVAKKPFPPEPSGSSRDSSYSQSHYPPSQQGPHREPYANQHKRPPSDWGERQKER
VYGHGGGGGGGGGGGGGGGGGWGSERHHQGYGSHHYKDRSSHRGRSDQHHNSGGGYRHHQ
HYSDAGRKRPFGNTYPGDKDHRGEYYRGDDRYHSDMKRRRPDDFRPHDREYRGGGGGGGG
GGGGGGGGGGGGGGGGGGSDYRNVKQSSDYRGPSGGGASEHYRFHGDAKGSADGGRSAGA
GGGGAGGGGGGGGAGAGGHRSPLVQRSPYDARSPLDRDHRNTPDYGWNTRKT
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaggaggaggaggactccatctttagcgccgatgcttgtcgtacacgaggcc
gggagccgagacaaaagcacggaggagcgcccggcctcccctcccggctcgccgcagggc
gacacggccacggccgccaccaccgccaccactaccccctcgtcatcttcaaccctcaac
atctccaccatctcggcgacggctgccagcgacgacgacgacgaggaggcatcgaataac
aacaacaacgacaacaacaacagcaacgcgtcaagcagcgccgcctctgaggacgacaac
caatcggcttccggctcggagtctggcagccagtcggagagcggcgatgactcgggcagc
caatcggagagcagctctggcggctccggcggctcgggaggctccggcggctcggggtct
gaaggagccacctcgagaggggatggctcaccgggccagcggcaaaaccggcggccctcg
cgcaaggagcgacttgccgacgttaagaagatgtgggaagagttccctgatgtttatggg
gtcaggaggtcaaaccgttcgcgtcaagagccgtctcgtctagatgtgagccgggtggag
gagggcaccagcgacgacgactcggaggtggactcgcccaagcagaagggacgtgccaag
cggagacctgatgaggactggcaagcatccggaacgggtgacgacggcgtggaggaggag
gaggaagaggaggaggaggaagatgacagcagcgaagggagtgcctcggactacgagccc
caaaacaaagtccggtcgcggcgtcctccgcccaaacctccggccagaccgccgactcgt
cgcgggacccccaagaagacgcccaagaagcgtaagaagagcgagtcttccgacgacgag
gacgacgtgacgcccaagaggcagtcgcgacggcaggcgacggtgaacgtgagttacaag
gaggacgatgacgaggaaacggactctgatgacatcatcgaggtgacggagacggcgcag
caggccgagagcgaggagttcgagatgatcgagcgcgtcatcgactgccgcgtcgggcgc
aagacagccgtcggtgccgccaccaccatctacgcggtggaggccgacggagacccaaac
gctggcttcttgcccggcgaggacgccactgccgccaaagccgccaccaccgccgctgcc
tccgccgcaacttccaccgcaaccgccgccgccaccaccaccacgaagacccccgccgat
agcaccgaggcgaccgccgcgacggacggcggtgatgccggcgccgacgctgacgccgat
ggcggcagcgtcccggcggacggcgcgagcggtgcgagcggcggcggcattcagtacctg
atcaagtggaagggctggtcccacatccacaacacgtgggagagcgaggacacactgcgg
cagcagaaggtgcgcggcatcaagaaggtggagaacttccagaagaaggatgaggagatt
tcgcagtggctgtcgatggcttccccggaggatgccgaatactacagctgccagcgggag
atgtctgccgacctctacaagcagtactgcgtggtggagcgcgttatagcaatgaagact
agtaagtctgctccgagtcacactgactcctccctgtcgcacgtgggccacaagtcaacg
tcgggccacccggactacctgtgcaagtggcagggcctgccctacgccgagtgcagctgg
gaggacggcgccctcatttcgcgcaagttccagcactgcatcgacggctacatggcgaac
ctccgctccaagacgctccccaccaaggagtgcaaggcgctgaagcagcgtccacgtttc
gtggcgctgaaggatcagccgccgttcgtgggcggcgtcgactgcctggagctgcgggac
taccagctcgacggcctcaactggctcgcgcactcgtggtgcaaaggcaacagcgtgatc
cttgccgatgagatggggctgggcaagacgatccagaccatctccttcctatcctacatg
ttccactctcaccaggtgtacgggcccttcctgctggtggtgcccctctccaccgtcacg
tcctggcagcgagagttcgcgacgtgggcgcccgagatgaatgtggtggtgtacctgggc
gacatgtcgagccgaaacgtgattcgggagtacgagtggattcaccagcagaccaagaaa
ctcaagttcaacgccctggtcaccacctacgagatcctgctcaaagacaagactgtgctg
ggcgcggtcaactgggcgttcctgggcgtggacgaggctcaccggctgaagaacgacgac
tcgctgctgtacaagtcgctcatcgagttcaagacgaacgtgaggctgctcatcacgggg
acgccgctccagaactcgctcaaggagctctggtctctgctgcacttcatcatgcccgac
aagttctccgcgtgggaagactttgacgcggtgcacggcagcggcagcgacaacggctac
gtgagcctccacaaggagctggagcccttcctgctgcgccgcgtcaagaaggacgtggag
cgctcgctccccgccaaggtggagcagatcctgcgcgtggagatgacgccgcagcagaag
cactactacaagtggatcctgacgaggaacttcaaagcgctgagtaaaggcacgcggggc
agcacatcgggcttcctcaacatcatgatggagctcaagaaatgctgcaaccactgctac
ctcatcaagctgcccgaggacgagaacggggacaagcacgacatcttgcagtcgctggtg
cgcagcagcggcaagctgatcctgctggacaagctgctgtgccggctgcgcgagactggg
caccgcgtgctcatcttctcgcagatggtgcgcatgctcgacatcctcgccgactacctc
gccatgaagcacttccccttccagcggctggatgggtccattaagaacgagcagaggaag
caggctctcgatcacttcaacgccgagggatcggaggacttttgcttcctgctgtcgacg
cgcgccggcggcctcggcattaatctggcgtctgccgacacggtcgtgatcttcgactcg
gactggaacccacagaacgacctccaggctcaggcgcgggcccaccgcatcggccagaag
aagcaggtgaacatctaccggctggtgacgcgcggcaccgtggaggaggacatcatcgag
cgagccaagaagaagatggtgttggaccacctggtgatccagcgcatggacacgacgggc
aagacggtgctgcagaagggctcggcgccctccagctccacgccgttcaacaaggaggag
ctggcgtccatcctcaaatttggcgccgaggaactgttcaaggagggcgaggccgaggag
caggattcgcagcaggagatggacatcgacgaaatcctgcggcgagcggagacgcgggag
aacgacgacagctcgctgcccacggccggcgaggagctcctctcgcagttcaaggtggcg
aactttgcgacgatggacgaggagggtcaggagctgaaggacgcgctggccgtccgctcg
tgggacgagatcatccccgaggagcactggaagcgcgtggaggaggaggagcggcagaag
gagctgctcgagatctgcatgctgccacgcatgcgtaccaagaagccggtgcacgtgaac
ggcagcgactcggacgcgagctgccggcggcggcgcggcaagcggcgttcgtcgggctcg
gagagcgactctgacgactcgggggacgacaagaagccgcgcaagcggggccggccacgc
accgtgccccgtgacactgtgcagggcttcaccgactcggagatccggaggttcatcaaa
agctacaagcgattcggagcgccgttggagaggctggatgcgattgcgcgcgacgcggag
ctgggggacaagtcggcggcagacctcaagcgactcggggagctgatccaccgcggctgc
gaggaggccatgcaggagcaagcggacggcaaagtcgacggtggcggccggggtaagaag
cgagggccggcgttccggctgtcgggcgtgcaggtgaacgccaagtcgctgctggcgcac
gaggaggagttcctgccgctgcaccaagccatcccctccgaccctgaacagcgcaagcgg
taccggctgtcgtcgcgcgccaaggcggcgcactttgactcggagtggggcgtggaggag
gactcgaacctcctcgtgggcatccacgagtacggctacggcaactgggagctcgtcaag
atggaccccgatctcaacctcaccgacaagatcttgcccgacgacccggagctgaagccg
caggcgaagcagcttcagacccgcgccgattacctcgtcaagctgctgaagaaggagatg
ctgcgcagggaggccctgaagcccgcggcccaggcgacgaacaagaagccccgcagggtc
cacgccaaaaaagcgcgcaagggcggtgcgcgcggcggggacgcggggcagcccgacggc
acgagcggcggctctccccgcgccgccgagcacgcgtcggaggaggagggcgagatcaag
gacgacggcggcgagaagaagaaaaagaagaagcgggagaaggagaacaaagagaaggga
gcggacggcaaggaggcgcggagaggcaagaaggagaaacgcgagaagaaagaaaagccg
cggaccggcaagggggcggagggcggtggccgggcggacgggaagagcggggagcggggc
acccgcgccggggccaaggcctccatcccccagggccccgtgcacatcacagcgggcagc
gagcccgtgctcatcgccacggagacggaggaggagttggaccagaagacgttcagcatc
tgcaaggagcgcatgcggccggtgaagaaggcgctgaagcagctggacaagcccgaggag
gggctgtcggagcgcgagcagctgctgcacacgcgccactgcctgctgcgcatcggcgac
cacatctcggagtgcctgcagaaacacgcggaccccgagatcgtcaagcagtggagacgg
aacctgtggatcttcgtgtcgaagttcacggagtttgacgcgcggaagctgcacaaactg
tacaagcacgcggtgaagaagcgcgccgaggaggccgggtcggagcagcccaaggcgagg
caggagaagcagaacttcgtcgccaagaagccgttcccgccggagccgtcgggctcgagc
cgcgactcgtcgtactcgcagtcgcactaccccccctcgcagcaggggccgcaccgcgag
ccctacgccaaccagcacaagcggccgccgtcggactggggggagaggcagaaggagcgt
gtgtacgggcacggcggcggtggtggcggcggcggtggtggcggcggtggtggcggtggc
ggttggggctctgagaggcaccaccagggctacggctcgcaccactacaaggaccgttcg
tctcaccgcgggcgctcggaccagcaccacaactcggggggcggctaccgccaccaccaa
cactacagcgacgcggggcgcaagcggcccttcggcaacacctaccccggcgacaaggac
caccgcggcgagtattaccgcggagacgaccggtatcactcggacatgaagaggcgtcgg
cctgacgacttccgtcctcacgaccgtgaataccgcggcggtggtggaggcggcggtggt
ggtggtggaggtggaggcggtggaggcggtggtggcggtggtggaggtggcggcagcgat
taccgcaacgtcaagcagtcgagcgactaccggggaccctcgggtggaggggcatcggag
cactatcgcttccacggtgacgccaagggctcggcggatggcgggcgaagcgctggcgcc
ggtggcggtggcgccggtggtggtggcggcggtggtggcgctggcgccggcggccaccgc
tcgccgctggtgcagcgatcgccgtacgacgctcgctctccattggaccgcgaccaccgc
aacacgccggactacggctggaacacgcgcaagacgtag
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integrated database retrieval system
