KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133342543
Entry
133342543         CDS       T09663                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133342543 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrj03019]
    133342543 (WDR82)
   03036 Chromosome and associated proteins [BR:lrj03036]
    133342543 (WDR82)
Messenger RNA biogenesis [BR:lrj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     133342543 (WDR82)
Chromosome and associated proteins [BR:lrj03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     133342543 (WDR82)
    COMPASS/SET1 complex (yeast)
     133342543 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st WD_LRWD1 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 PROPPIN KNTC1_N Beta-prop_WDR35_TULP_N VPS8_N MIOS_WD40 Cytochrom_D1 MinC_C
Other DBs
NCBI-GeneID: 133342543
NCBI-ProteinID: XP_061407701
LinkDB
Position
15:295700..303770
AA seq 313 aa
MKLTDNVMRSFRVAKVFRENSDKINCFDFAPNGETMISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKKVVALCMSPVDD
TFISASLDKTIRLWDLRSPNCQGLMHLQGRPVCSFDPEGLIFAAGLNSEMVKLYDLRSFD
KGPFATFRLQQDRTCDWTGLKISNDGKFILIATNGGVLRLVDAFQGSALHMFTGHTNSKG
ITLEASFSPDSQFIMTGSEDGKIHVWHTESGTKVAILDGKHTGPVTCLQFNPKYMMVASA
CANMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgaccgacaacgtgatgaggagcttcagggtggccaaggttttccgcgagaac
tcggacaagatcaactgcttcgacttcgcgcccaatggcgagaccatgatctccagcagc
gacgacgactccatcgtgctctacgactgccaggagggcaagcccaagaggacgctctac
agcaagaagtacggggtggatctcatccgctacacgcacgccgccaacaccgtggtgtac
agctccaacaagatcgacgacacgatccggtacctgtcgctgcatgacaacaagtacatc
cgctacttcccaggacacaccaagaaagtggttgctctttgcatgtcccccgtggatgat
accttcatctccgcttcgctcgacaagaccatccgtctctgggacctgcgctcccccaat
tgccaggggctgatgcacctgcaaggccgccctgtgtgctccttcgaccccgagggcctc
atcttcgccgcgggactcaactcggagatggtgaagctgtacgacctgcgctccttcgac
aagggccccttcgccacgttccgcctgcagcaggaccgcacgtgcgactggaccggcctc
aagatcagcaacgacggcaaattcatcctcatcgccaccaacggaggcgtgctgcgtctc
gtcgacgccttccagggcagcgcgctgcacatgttcacgggccacacgaacagcaagggc
atcaccctggaggcatccttctcccccgactcccagttcatcatgaccggttcagaagac
gggaagatccacgtgtggcacacggagagcggcaccaaggtggccatcctggacggcaag
cacacgggccccgtcacctgcctgcagttcaaccccaagtacatgatggtggccagcgca
tgcgccaacatggctttctggcttcccaccatcgacgactga

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