Lethenteron reissneri (Far Eastern brook lamprey): 133342646
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Entry
133342646 CDS
T09663
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04260
Cardiac muscle contraction
lrj04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133342646
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133342646
04261 Adrenergic signaling in cardiomyocytes
133342646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133342646
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133342646
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA_3
VWA
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
CobT_C
Motif
Other DBs
NCBI-GeneID:
133342646
NCBI-ProteinID:
XP_061407914
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Position
15:6849851..7011429
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AA seq
1104 aa
AA seq
DB search
MQLGGQAVGLRLACVALALSGIALHATDAQKRLPSETVREWARTFAEEMRFVSTRYSGYS
FMQKKYKDYEKRVYIEEMHGLKMVRKLARLMEDMLSRKTEAVKRLVEAAEEADLKHEFNS
EMQYDYYNAVFINDVDEEGNYIELAREFILEPNAHFNNLAVNTSLSNVQVPTNVYNKEPN
IVNGAFWSEALNPVFEDNFERDATLTWQYYGSSTGFFRQYPGIKWTPDENGVISFDCRNR
GWYIQAATSPKDIVILVDVSGSMKGLRLTIAKQTISTILDTLGDNDFVNVIAYNEQLHYI
EPCFEGGMVQANRDNREHFKQLLEDMHAQGVADLSNALEEGFVILDQFNGTGQGSICNQA
LMVVTDGAVETFAEVFEKYNSPDKKVRIFTYLIGREQAFAKPIKWMACANKGYYTQISTL
ADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSTLPQAQKLYSTSSQGLLLMTTVAMP
VFSKKNETRSHGILLGVVGTDVPLKELLKMAPRYKLGVHGYAFIITNNGYIVTHPDLRPM
YKEGKKMKPKPNYNSVDLSEVEWEDVDEVLRTAMVNRQTGTFSMEVKNSVDDGRRVLMLT
NDYFFTALKDTPFSLGVVLSRGHGEYVLMGNVSKEEGLHDLLHPDLNIASDWIYCNVDID
PDHRKLTQLEAVRRYLLGIEPDLQCDDELLQEVLFDAVVTAPLEAYWTSLVMNKSENVEK
GIEMAFLGTRAGLTRTSFYIGKEKLSDKDFLTKDQESVFTMDHFPIWYRRAAEQPPGTII
YTVPYQAGAKRNKKMVVTASVVITVTEDVRTAVAAAVGIQIKVDFFRKKFLSAAKQPQDT
DCSAIEGRCPIDCEDPTLNCYIVDDNGFVIVSKNDEETGEFFGVVDGAVMSELLSVGAFI
RREMYDYQAMCKRHLEYESSAFNLLNPYHSFIAAMKWIVTELAVFFMEFNVYSWWYSGYT
SHAKTVFHSSHKHRKHDILEPCDTTFSAFITDRSIQETNGILNCGCRKTFVMQQIPYSNL
MMVVVDGDCECTTVAPMLLNSYEIKYNESVKCDRMRSMKVRRRPDSCHAFHPDENAKECG
GAMGLVPFPQFLLLPAAALCATWR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgggcggacaggcggtgggtttaaggctggcatgcgtggctctcgcactgagc
ggcatcgccctgcatgccactgacgcgcagaaacggttaccttcagaaaccgtacgagaa
tgggcaaggacatttgcggaggagatgcggttcgtttccacccgctactctgggtacagc
ttcatgcaaaagaaatacaaggactacgagaagagggtctacatcgaggagatgcacggg
ctgaagatggtgcgcaagctggcgcggctcatggaggacatgctgagcaggaagacggag
gcagtgaagagactggtggaggcagctgaggaggcagacctcaagcatgagttcaactca
gaaatgcagtacgactactacaacgcggtgttcatcaacgacgtggatgaggaggggaac
tacattgagctggcgagggagttcatcctggagcccaacgcgcacttcaacaacctggcc
gtcaacacatcgctcagcaacgtgcaagtgccgaccaacgtgtacaacaaagagccaaac
atcgtgaatggtgcattctggtccgaggccctgaaccccgtgtttgaggacaacttcgag
cgcgatgccaccctcacctggcaatactacggcagctccacaggattcttccgccagtac
ccgggtatcaaatggacgccagatgaaaatggagtgatttcatttgattgcaggaacagg
ggctggtacattcaggcggcgacgtcgcccaaggacatcgtcattctggtggacgtgagt
ggcagcatgaagggtctgcgcctcaccatcgccaagcagaccatcagcaccatcctggac
acactcggggacaacgactttgtgaacgtcatcgcttacaatgagcagctgcattacatt
gagccgtgcttcgaaggagggatggtacaggcaaaccgtgacaacagagagcactttaag
cagcttttggaggatatgcatgcacagggggtggcagatttgtcaaatgccctggaggaa
ggtttcgtgattttggaccagttcaacggcacggggcagggtagcatatgcaaccaggcg
ctgatggtcgtcaccgacggagccgtcgagacctttgcagaggtgtttgagaagtacaac
tcgcccgacaagaaggtccgcatattcacctacctcattgggcgagagcaggcatttgcc
aaaccgatcaagtggatggcctgtgcaaacaaaggctactacacacagatctcaacgctg
gccgacgtgcaggagaatgtgatggagtacctacacgtgctcagccgtcccatggtcatc
aaccacgaccacgacatcatctggaccgaggcgtacatggacagcacgctgccccaagcc
caaaagctctactcaacctcatcccaggggctactgctcatgaccaccgtggccatgcct
gtcttcagcaagaaaaatgaaacgaggtcccatggcatcctcctgggcgtggtgggcaca
gacgtgccactcaaggagctgctcaagatggctcctcgctacaagcttggcgtccacggc
tatgcgttcatcatcactaacaacggctacatcgtcacccacccggacctgcgcccaatg
tacaaagagggcaagaagatgaagccaaagccgaactacaacagcgtggatctctccgag
gtggagtgggaggacgtggacgaagtgctgcggactgcgatggtcaacagacagacgggc
accttctcgatggaagtgaaaaactccgtggacgatgggagacgcgttctcatgctgacc
aacgactacttcttcacggcgctcaaggacacgcccttcagtttaggagttgtcctgtcg
cgtggccacggagagtacgtgctgatggggaacgtgtccaaggaggagggcttacatgat
ctattgcaccctgacctcaacattgccagtgactggatctactgcaacgtggacattgac
ccggaccatcgcaagctcacgcagttggaggctgtcaggagatatctgctgggaattgaa
cctgatctgcaatgtgacgatgagctcctccaggaggtgctgtttgacgccgtcgtgacg
gccccgctcgaagcctactggacgagcctcgtgatgaacaagtcagagaacgttgaaaag
ggcattgaaatggctttcctggggacacgggctggactgaccagaaccagcttctacatc
ggcaaggagaaactctctgacaaagatttcctgaccaaggaccaggaaagcgtcttcacg
atggaccacttccccatctggtaccgccgcgccgctgagcaaccgccgggcacaatcatc
tacaccgtgccctaccaagcaggggcgaaacgcaacaaaaaaatggtggtgacagcaagc
gtcgtcatcacggtcaccgaggacgtgaggacagccgtggctgctgctgtgggaatacaa
ataaaagtggacttcttcaggaagaagtttttatctgcagctaaacagccacaggatact
gactgctcagccatcgaaggccgatgtcctatcgactgcgaggacccgacgctgaactgc
tacatcgtagacgacaacggattcgtcatcgtctccaagaacgacgaagagacgggagaa
ttcttcggggtggtggacggggccgttatgagcgagctgctcagcgttggagcgttcata
cgacgggagatgtacgactaccaagccatgtgcaagaggcacctggaatatgagagcagc
gctttcaacttgctcaacccgtaccattccttcatcgcggcgatgaagtggatcgtaacc
gaactggcagtgttcttcatggagttcaacgtctacagctggtggtattcgggctacact
tcgcacgccaagaccgtcttccactcgtcgcacaaacacaggaagcacgacatcctggag
ccatgtgacaccacgttctccgcgttcattaccgaccgttccatccaagagaccaatggc
atcctcaactgcggctgccgaaagacgtttgtcatgcagcagataccctacagcaacctg
atgatggtggttgtggacggcgactgcgagtgcacgaccgtggctcccatgttgctcaac
tcctacgaaattaaatataatgaatcggtgaagtgtgatcgcatgcgctcgatgaaggtt
cgtcgcagaccggattcttgccacgctttccatccggacgagaacgcgaaggagtgcggt
ggtgcgatgggcctcgtgccgttcccccagttcctcctcctcccagcggctgccctctgt
gccacttggaggtga
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