Lethenteron reissneri (Far Eastern brook lamprey): 133342879
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Entry
133342879 CDS
T09663
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133342879 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133342879 (FIP1L1)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133342879 (FIP1L1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
PNISR
Motif
Other DBs
NCBI-GeneID:
133342879
NCBI-ProteinID:
XP_061408222
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All DBs
Position
16:5579891..5632728
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AA seq
778 aa
AA seq
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MAAEVGDAAGDAVGLAGEDEEQWLYGDEDAADKAEGEPATVGPPADVPAAADDKGGDLPV
NGNAEETNGDGTEAVAAPNGTEDAEDDSDSDSDDDDVQVTIGDIKTGAPQYTGVNLNIKP
GARPYGASSAAGPKQVKGVDLDAPGSIAGIPVLEVDLDSFEDKPWRKPGADLSDYFNFGF
NEDTWKAYCEKQKRLRQGLDPLPSGPAMNRITVQQGRTGNLLDKEQDMAGPTLIKTEFPL
QQGGLRRMGPPPHRYEPRKLSGTIDVIGSQMIGITRVEGRRRDRDGLPEPSPIQVLGTLP
PPGDYSANQGKPPPSFAPPTAPPPLRPMGLPPNFMPPPPILPPPVSVGPPHIPPPGFMPP
HMPGPPPPMVVPPMDSGPPPGFPNRPPPMPFGYSTVVSYPPVSVPAPSWGPPAGASVDKP
GPIQGSAMVVVGGPGGPAGGGPAGPGGGPGGNPGGGVGGIGGGGGGPGGPGGLGPPGGGA
SPWDRERLTTSRDGHTRSPSVSSYVSEDERFRYWERETREFGREREMERSYEREQQQQQQ
QHNSNSSSNNNSSNSSSSSNNSSSNNNNSSSSNSSSSSSSSSVSTGSRRRVSTEITAATC
GRGSTASAATTASGGTAAATGAAAAAAAAAAAAGAAATPRSGTATGATATRMTGEEEGEG
AEWEEAEAAAAPAVVAAAADTSRPAGGTTTTTTLTATGGTSTRSPSGAARTRSTTPAPRR
SAPPTSRPARPPTKTERRCRRSPPLPPHLPPSIPTPVCCSRRFVARFGGSRSLPTTRR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaggtgggggacgcggcaggcgacgccgtaggcttggccggggaggacgaa
gagcaatggttgtatggagatgaagatgccgctgacaaagcggagggtgaacctgcaact
gttgggccacctgcggacgtgcccgcggccgccgacgacaaaggcggcgacctccctgtg
aacggcaacgccgaagaaaccaacggcgacggcaccgaggccgtggccgctccgaatggg
actgaagatgccgaagacgacagcgatagtgatagcgacgacgacgacgtgcaggtcacg
attggggacatcaagacgggggcgccacagtacactggcgtgaacctgaatatcaagccc
ggcgcacggccgtatggggcatcctcagcagccggacccaaacaggtgaagggcgtggat
ctggacgcgccggggagcatcgccggcattcctgttctcgaggttgacctcgactccttt
gaggacaagccctggcgcaaaccaggcgcggatctgtctgactacttcaactttggcttc
aacgaggacacgtggaaggcgtactgcgagaagcagaagcgtcttcgccagggactcgat
ccgctgcccagcggcccggccatgaaccgcatcacggtgcagcaagggcggacgggaaac
ctgctcgacaaggagcaagacatggccggaccaacgctcatcaagaccgagttcccactg
cagcagggtggcttgcgacggatgggacccccgcctcacagatatgaacccaggaagctg
tcgggcaccatcgacgtgatcgggagccagatgatcggcatcacccgcgtggagggcagg
aggcgagaccgcgacggcctccctgagcccagccccatccaggtgctcgggacgctgccg
ccccctggagactacagtgcgaaccagggcaagcccccgccgtcgttcgcgcccccaaca
gccccgccgccgctgcggcccatgggcctcccgcccaacttcatgccgccgccacccatc
ctgccgccacccgtgagcgtgggccctccgcacatacctcctccagggttcatgccgccg
cacatgccgggacccccgccgcccatggtcgtgccaccgatggacagcgggcccccgcca
ggcttcccgaaccgccccccgcccatgccgtttggctactccaccgtcgtctcgtacccg
cccgtgtctgtccccgcgccctcgtggggccctccggccggagcgtccgtcgacaaaccg
ggccccatccagggcagcgccatggtggtcgtgggtggccccggtggccccgctggcggc
ggccccgctggccccggcggtggccccggtgggaaccccggcggaggggtgggagggatc
ggaggcggcgggggaggcccgggaggccccggaggcctgggcccgcccggcggaggggca
tcgccgtgggaccgcgagcggttgaccacgtcccgggacggacacacgcgcagtccgtcc
gtcagcagctacgtcagcgaggacgagcgcttccgctactgggagcgcgagacgcgcgag
ttcgggcgcgagcgcgagatggagcgctcgtacgaacgcgagcagcaacagcagcagcag
caacacaacagcaacagcagcagcaacaacaacagcagcaacagcagcagcagcagcaac
aacagcagcagcaacaacaacaacagcagcagcagcaacagcagcagcagcagcagcagc
agcagcgtgagcaccgggagccgccggcgcgtgagcaccgagatcaccgcggcgacgtgc
gggagagggagcaccgcgagcgcagctacgaccgcgagcggcggcacggcagccgcgaca
ggggcggcggcggcggcggcggcggcggcggcggcggcgggggcagccgcgacaccgagg
agcggcaccgcgacaggcgccaccgcgacaaggatgacgggggaggaggagggggagggg
gcggagtgggaggaggcggaggcggcagcagcgccggcggtagtggcggcagcagccgac
acaagtcgtcccgcaggaggcaccacgacgacgacgactctgacggccaccggcggcaca
agcacaagaagtccaagcggagccgcgaggacaaggagcacgacgccggcgccacggagg
agcgcaccgccgacgtcgaggccggctcggccgccgacgaaaactgagcgacggtgccgc
cgctccccccctctccccccccacctcccaccctcaattcccacccccgtgtgttgttct
cggcgatttgtggctcgtttcggtggctcgcggtcattgccgacgacgcgccggtga
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