Lethenteron reissneri (Far Eastern brook lamprey): 133342890
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Entry
133342890 CDS
T09663
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133342890 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133342890 (SMARCA5)
03036 Chromosome and associated proteins [BR:
lrj03036
]
133342890 (SMARCA5)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
133342890 (SMARCA5)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
133342890 (SMARCA5)
RSF complex
133342890 (SMARCA5)
WICH complex
133342890 (SMARCA5)
B-WICH complex
133342890 (SMARCA5)
NORC complex
133342890 (SMARCA5)
BRF complex
133342890 (SMARCA5)
NuRF complex (fruit fly)
133342890 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
133342890
NCBI-ProteinID:
XP_061408242
LinkDB
All DBs
Position
16:complement(7419086..7444045)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSDEESEPVSPVAKQESNETSAEPTASPNTSIPEAKPPDSDYEYKMKSDRANRFEYLLKQ
TELFAHFIQPAAQKAPVSPLKIKPGRPRQKIDEKQHLLSVGDFRHRRTEQEEDEELLSES
KKATNICTRFEESPTYVKGGTMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL
LGYMKHHRNIQGPHMVLVPKSTLHNWMIEFERWVPSLRAVCLIGSKDQRSAFIRDVMMPG
EWDVCVTSYEIVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSDIVREFKSTNRLLLTGT
PLQNNLHELWSLLNFLLPDVFNSSEDFDSWFDTNNCLGDQELVERLHMVLRPFLLRRIKA
DVEKSLQPKKEVKIYIGLSKMQREWYTRILMKDIDILNSAGKMDKLRLLNILMQLRKCCN
HPYLFDGAEPGPPYTTDTHLVNNSGKMVVLDKLLPKLQEQGSRVLLFSQMTRMLDILEDY
CMWKGYGYCRLDGQTPHEDRQEAIAAYNAPNSSKFIFMLSTRAGGLGINLATADVVILYD
SDWNPQVDLQAMDRAHRIGQTKRVRVFRFLTENTVEERIVERAEMKLRLDSIVIQQGRLI
DQQANKLGKDEMLQMIRHGATHVFASRDSEITDEEIDVVLERGEKRTAEMNEKLSSLGES
SLRNFTMDSESSVYTFEGEDYREKQKMSLTEWIEPPKRERKANYAVDAYFREALRVSEPK
APKAPRPPKQPSIQDFQFFPPRLFELLEKEILHYRKTIGYKVPRSTDIPNAAQVQKEEQR
KIDEADVLNEEEAEEKEKLLTQQGFTNWTKRDFNQFIKANEKWGRDDIENISQEVEGKTP
EEVMEYSAVFWERCNELQDIERIMAQIERGEARIQRRVSIKKALDAKIARYRAPFYQLRI
SYGTNKGKNYTEEEDRFLVCMVHRLGFEKESVYDELRQCIRNAPQFRFDWFIKSRTAMEL
QRRCNTLITLIERENMELEEKEKADKKKRGPKPGTKRKGESPVEEKGAKKVKT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaggaaagcgagcccgtgtcgcccgttgccaagcaagagagcaatgagacc
agcgctgagccgaccgcttcacccaacacttcaatcccagaggcaaagcctccagactcg
gactacgagtacaagatgaaatccgatcgagcaaaccgcttcgagtacctgctcaagcag
acggagctctttgctcacttcatccagccggcagcgcagaaggcgcccgtgtcgccgctc
aagattaagccgggacgaccgcggcagaagatcgatgagaagcagcacctgctgtccgtc
ggagactttcgccaccggaggacagagcaggaagaggatgaggagcttttgtcagagagc
aagaaggcgaccaacatttgcactcgctttgaagagtcacccacctatgtgaagggtggc
accatgagggattaccaagtgcggggcctcaactggctcatctctctctatgagaatgga
atcaatggcatcctggctgacgagatgggcctgggcaaaacgctgcagaccatctccctg
ctgggctacatgaagcatcaccgcaacatccagggaccacacatggtgctggtgcccaag
tccacgttgcacaactggatgattgaatttgagcgttgggtgccatcgcttcgtgccgtt
tgcctcattggaagcaaggaccagcggtcggctttcatccgggatgtcatgatgccggga
gagtgggacgtatgtgtcacctcgtacgagattgtcattcgcgagaagtccgtcttcaag
aagttcaactggcgatacctggtcattgacgaggcgcaccgcatcaagaatgagaaatcc
aagctttcggatattgtgcgcgagtttaagtcgacgaaccgactactgctgacgggtacg
cctctgcagaacaacctgcacgagctgtggtccctgctcaacttcctgctgcccgacgtc
ttcaactcatccgaggattttgattcttggtttgacacgaacaactgcttgggagaccag
gaattggtggaacgtctacatatggtgttaaggcccttccttctgcgccgtatcaaggct
gatgtggaaaagagtcttcagccaaaaaaggaagtcaaaatctacattggcctcagcaaa
atgcagagagagtggtacacaaggatcctgatgaaggacatcgacatcctgaactcggcc
ggcaagatggacaagctacgcctgctcaacatcctcatgcagctgcgcaagtgctgcaac
cacccgtacctgtttgacggcgctgagcctgggccgccctacaccacggacacccacctg
gtcaacaacagcggcaagatggtggtgctcgacaagctgctgcccaagctgcaggagcag
ggttcccgcgtgctgctcttcagtcagatgacgcgcatgcttgatattttggaggactac
tgcatgtggaaaggctatgggtactgccgtctggatggacaaactcctcatgaagacaga
caggaggccattgcagcatacaatgctcccaacagctccaagttcatcttcatgctgtcg
acgcgtgcgggtggcctcggtatcaacctggccacagctgatgtggtcatcctttacgac
tcagactggaaccctcaggtcgacctgcaggccatggatcgtgctcaccgcattgggcag
acgaagagggtgcgtgtgttccgtttcctgacggagaacacggtcgaagagcgcatcgtg
gagcgggcagagatgaagctgcgccttgactctatcgtcatacagcaaggccggctgatc
gatcagcaggccaacaaactgggcaaggacgagatgctgcagatgatccggcacggcgcc
acgcacgtattcgcgtcgcgcgacagcgagataaccgacgaggagatcgacgttgtcctg
gagcggggagagaaaaggacggccgagatgaatgagaaactgagcagcctgggcgagagc
tccctgcgcaacttcactatggactcggagagcagcgtgtacacgttcgagggcgaggac
tacagagagaagcaaaagatgagcttgacggagtggattgaacctcccaagcgtgagcgc
aaggcaaactatgctgtggacgcctatttccgcgaggctttgcgagtcagcgagcccaag
gcacccaaagccccccggccaccaaagcagccaagcatccaggacttccaatttttccct
cctcgcctctttgagctcctggagaaagaaatcctgcactaccgaaaaaccatcggctac
aaggtcccgcgtagtacagacatccccaacgccgcccaggttcaaaaggaggagcagcgc
aagattgacgaggctgacgtactgaatgaagaggaggcggaggagaaagagaagcttctg
acgcagcagggctttacaaactggaccaagcgagacttcaaccagttcatcaaggccaac
gagaagtggggtcgcgatgacattgagaacatttctcaggaggtggaggggaaaacccct
gaggaggtcatggaatactcagctgtgttctgggagaggtgtaatgagctgcaagacatt
gagcgaatcatggcccagattgagcgtggggaggctcgaatccagcggcgggtcagcatt
aagaaggctctggatgccaagattgcacggtaccgggcgcccttctaccagctgcgcatc
tcgtatggcactaacaagggcaagaactacacggaggaggaggaccgcttcctggtgtgc
atggtgcaccggctgggcttcgagaaggagagcgtctacgacgagttgcgccagtgcatc
cgcaacgcgcctcagttccgcttcgactggttcatcaagtcccgcacggcgatggagctg
cagcggcgttgcaacacactgattaccctcatcgaaagggaaaacatggaactggaggag
aaggagaaagccgataagaagaaacgaggccccaagcctggcacgaaaaggaagggagaa
tcaccggtggaggagaagggagccaagaaagtgaaaacctaa
DBGET
integrated database retrieval system
