Lethenteron reissneri (Far Eastern brook lamprey): 133342936
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Entry
133342936 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133342936
Membrane trafficking [BR:
lrj04131
]
Endosome - Lysosome transport
Others
Others
133342936
Endosome - Golgi transport
133342936
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133342936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
Neurobeachin
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
DUF4800
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR55
Kelch_6
INTS7_N
Motif
Other DBs
NCBI-GeneID:
133342936
NCBI-ProteinID:
XP_061408314
LinkDB
All DBs
Position
16:complement(8585770..8866990)
Genome browser
AA seq
3002 aa
AA seq
DB search
MEVNEAGDAAVIAHTAADDTAADTAAAPADGGEGGGGCVGGDEFAALREKVLAGQTSSRE
VVDTVLNLLVGGQFDLEANFVVRDPEGVSGLVCLLDVCDPQCRGEILSLFTAVLRKSLRN
LQACTEAGLIGQLLQRLQKLDDVTAELLVGVVGVLASYSITVRELKLLFGCLRGEKCQWR
RHAVKLLSVLNHMPQRHGPETFFSFPGGSGSAIALPPIARWPYQNGFTVHMWVRMDPVTS
LNAEKEKPYLYCFRTSKGVGYSSHFMGSCLTVTALKSKGKGSQHCIQYDFQPKKWYMITI
VHVYNRWKNCEIRCYVDGNLVSSGDMAWYISTNDTFDKCYLGSADNIDADRTFSGQMSAV
YLFSEALNGSHVAAIFQLGPGYKNTFKFETESDLHLPEHHQLVLYEGRLAGSLAFTYNAK
ATDGQLCLESSPRDTTSIFVHTPHALMLQCVKAVVTNPIHSAMHSIGGVQVLFPLFGQLD
FLEHNSEEMNTSVCGTLLAFLLDLLKSSVIMQEQMVSSKGFLLIGAHLEKASTQHLTLSV
VGHLLGFTKYLESIPNGAPLLKQLCDYILFNPAIWVHVDANVQQTLYTYLANEFVKKTRI
FNAVRRIGTAIQVLHTLKHYYWLVNPMDRSGTVPRGLDGPRPSRDDMATLRAYLLLFLKQ
LILKEGGLKPDELQSILNYLLTVHEDDNLYDVLQLLVALMSESPSSVIPAFDQRSGMRVV
FKLLASRSEQIRVQALKVLSYFLKHLSSKRKAEMMVAPSLFSLLGERLMLHTNVLSMTTY
NVLFETLTEHVCTQVIHKQHPDADSSVKIQNPLILKVVATLLRSAPATIETMEVKRVFLS
DMIRLFNNNRENRRSLLQCSVWQEWMFSLAYFSPRSTEERKITEMVFTLFRILLYHAVKY
EWGGWRVWVDTLSIAHSKVSFEAHKERLARMYADFQRREQENGGRAEAAAGTVSTVSGLS
DGAGLAKITELPGEDAADPYEGFKSSSQGADKAKRGSLLREVAQMGQAAAPPLEGGPPGG
SADDAGTMAQDAGEAEAMEEGEAKVETVEAEVETVEDKVETVEAKVETVEAKVETVEAEA
AEGEDEAKAEEAEAMAAEGEAEIEGEHKVKEQEAKVDEEDITAEAETTVEEDVSEMETEE
ESKVEVEAEAEKGNEDGDSQEEASEEAETSEGGVVQREDEDSAETAATEGAKRTEGAEAA
APGDQDDGPAGDAAISGGEEEAAEGKAAIAQSATPTDDDDQASEVSKEASVSFTDASADG
ERDLAQAAELLVDKVCRTAVSVISSEAAEKRGDGEPRASDQTDSIAAADKLSESQQPSAG
DDGAKDDGAGDGGGGTEEKSQAEKPRGDDDGGGDAVTAQTSTLSPRGEATAELNAKTLVE
QAMERDVNIQMAKTAQSAPTPQQEGQPGVVLNFRPSTPPISTTASTAAGVAASAAAAATD
EAREKVAGAQQGGAARRDGPMNAGTQAATFRIPEFQWSSVHQRLLADILFALESDIHIWR
SHTTKLLMDFVNSSENYVFVHNMLQITSHLVDNLIMVGGGLLPMLQAVTSPADVDLDASQ
HVDSLPSEIALNFLHRLLNLVDALVFASSLNFSEVESEKNMKAGGLLRQCLRLVCCVALR
NCVESQEQQRSRAESGSESSTSSTAKGAAEPPPTVPARDPERLLQPMDVHRLRAVVFRDV
EDTKQAQFLGLAVVYFISVLMVSKYRDILESGHGDRMRSLSAASQGGGAKPGEAKPAVTG
SVRRDNNERAAPEPAVAASSGDGSPSAGPDAMSELLSTLSTEVKRSDEVASVAAISMVEI
PLDSTPMPSPVNGGKPFPPASHDAPATAAVASPLAHGAEAGSSSKKPEVAAAEAAAIKGE
IGASGKEEGGKASELSSAPAPAPKDSAVGSTAGDKSQEAGSSGGAMVQALPDGKASVPAP
RDGNNITQRLERALESTAPLLREIFVDFSPYLSRTLLGSHGQELLLQGSGLASIKSSTSV
VELVMLLCSQEWQNSIQKHAGLAFIELVNEGRILCHAMKEHLVRVGSEADFILERQRADE
INKHAEFESHCAQYSADRREEEKLCHHMIGAARRRDGVMATRLHHRIVDILSKRHGAWGH
VLQSRAREFWRLDSWEDDQRRRRRLVPNRQGSTHAEATLRPALETVSDEEVARRACRALR
ERMTDEELRSPETPSEGDAVDLSVDVEDEASGRSSPERGDWDLDTLTGPVALSTPAQLIT
PTVAFRGTLSITANELCFEVDEDDPGFKAVDPKVLAYTESLHGKWLFSEVEAIFSRRYLL
QNTALEIFLSTRTSVMFNLPDATIVKSVVHLLPRVGIGTLYGLPQARRYSLASPRQLFKA
SNMTQRWQQRDVSNFEYLMFLNTIAGRTYNDLNQYPVFPWVIANYDSEELDLTLPSNFRD
LSKPVGALNPQRAAVFAERYSSWDDADIPAFHYGTHYSTAAFVLMWLLRVEPFTNYFLSL
QGGKFDHADRTFSSVARAWRNSQRDTSDVKELIPEFFYLPEMFTNSNDYNLGVTDAGVAV
CDVVLPPWAKTGEEFVRINRAALESEIVSCQLHQWVDLIFGYKQRGPEAIRAMNVFYYLT
YEGAVNMASIRDRVTREAVEAQIRSFGQTPAQLMVEPHAPRSSAMHMTPMMFSDKSQQEV
IMVLKFPSNSPVTHVAANTGPMQSPPAILTITCSRLFAINKWNGLCGSLERSSASMEDIM
RLPVEIDPLLVANMGLHRRQIVDPVDHSVPTCVNTFTVTADNRFVMLGGFWDKSFRVYST
DTGRLKQAMFGHWDVVTCLARSEVGVGGDCYVASGSRDATVLLWRWSGRELALGDRTTHG
NMRSPRAILTGHDTEVTSVAVSTELGLVISGSIGSPCLMHTLAGELLRALEGASATATPL
LLAISQDALCFGYYDDGTLLSFSVNGRLSARTPTGDTTRAMVLSADGQYVLTGGDKGVVE
VWRAYDLAKLYTYPMCDSSVRALGLSYDQRVVIAGMATGSIVLFHINFNHWHCEYQERYS
AP
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaacgaggcaggcgatgcagcggtgatagctcatactgctgctgacgatact
gctgctgatactgctgcagctcctgctgatggtggagaaggtggaggtggttgtgtcgga
ggtgacgagttcgcggcgctgagagagaaggtgctggctggacagacgtccagcagagag
gtggtggacacggtgctgaacctgctggtcggcgggcagtttgacctggaggcgaacttc
gtggtgcgcgaccccgagggtgtgagcggcctcgtgtgcctgctggacgtttgcgacccc
cagtgccgcggcgagatcctcagcctcttcacggccgtgctgcgcaagagcctgcgcaac
ctccaggcctgcacggaggccggcctcatcggacagctcctccagcgcctgcagaagctc
gacgatgtcactgcagagcttctggttggagtggtgggcgtgctggcaagctacagtatc
accgttcgtgagcttaagctcctgtttggctgcctgcgcggagagaagtgccaatggcgc
cggcacgccgtcaagctgctctcggtactcaaccacatgccccagaggcacggcccagaa
acgttcttcagcttccccgggggtagcggatccgctatcgccctgccacccatagcacgc
tggccgtaccagaacgggttcaccgtccacatgtgggtccgcatggaccccgtcaccagc
ctaaacgccgagaaggagaagccctacctgtactgcttccgcacaagcaagggtgtcggc
tactccagccacttcatgggaagctgcctcactgtaaccgcactcaagtccaagggcaaa
ggctcccagcactgcattcagtacgacttccagcccaagaagtggtacatgatcacaatc
gtccacgtgtacaatcgttggaagaattgtgagatccgctgctacgtggatggcaacttg
gtgtcgtcgggggacatggcctggtacatcagcaccaatgatacgttcgacaagtgctac
ctgggctcggcggacaacatcgacgccgaccgcacgttcagcgggcagatgtcggccgtc
tatctcttcagcgaggccctcaacggctcgcatgtggcggccattttccagctggggccc
ggatacaaaaacaccttcaagtttgagacggagagtgacctgcacctgccagagcaccac
cagctcgtgctgtacgaaggccggctcgccggctccctggccttcacctacaacgccaag
gccacggacgggcagctgtgcttggagtcgtctccccgtgacaccacgtccatcttcgtg
cacacgccgcacgccctcatgctgcagtgcgtgaaagcggtggtgacgaacccgatccac
agcgccatgcactccatcggcggtgttcaggtcctcttcccgctcttcgggcagctcgac
ttcctggagcacaacagtgaggagatgaacacctctgtctgtggcaccttgctggccttc
ctgctggacttgctcaagagctccgtcatcatgcaggagcagatggtgtccagcaagggc
tttctgctcatcggtgctcatctggagaaggcatcgacacagcacttgacgctcagcgtg
gttgggcaccttctgggttttaccaagtacctggagagcattcccaacggagcgccgctc
ctcaagcagctgtgcgactacatcctcttcaaccccgccatctgggtgcacgtcgacgcc
aatgtccagcagaccctgtacacctacctggccaatgagttcgtgaagaagacgcgcatc
ttcaacgcggtgcgccgtattggcacggcgatccaggtgctgcacacgctcaagcactac
tactggctggtgaaccccatggaccgcagcggcacggtgccccgcggactcgacggaccc
aggcccagtcgcgacgacatggccacgctccgtgcctacctcctgctcttcctcaaacag
ctcattctcaaggaaggagggctcaaaccggatgagctccaaagcatcttaaattatctg
ctcactgttcacgaagacgacaacctgtacgacgtgctgcagctgctggtggcgctcatg
tcggagagcccctcctccgtcatccccgccttcgaccagcgctccggcatgcgggtggtg
ttcaagttgctggcgtcgaggagcgagcagatccgcgtgcaggccctcaaggtgctcagc
tacttcctgaagcacctgagctccaagcgcaaggcagaaatgatggttgcgcccagcctc
ttcagcttgctgggagagaggctcatgctgcacaccaacgtgctctccatgaccacgtac
aacgtcctctttgagacattgacggagcatgtctgcacccaagtgattcataagcagcat
ccagacgctgactcctctgtcaagattcagaatcccctgattctcaaggtggtggccacc
ctcttgcggtccgcgcccgccaccatcgagacgatggaggtgaagcgcgtctttctgtcc
gacatgatccgactcttcaacaacaaccgcgagaaccgcaggagcctgttgcagtgctct
gtgtggcaggagtggatgttctccctcgcgtacttctctccccgctccacggaggagcgc
aagatcacggagatggttttcaccctcttccgcatcctgctgtaccacgccgtcaagtac
gagtggggcggctggcgcgtctgggtcgacacgctgtccattgcgcactccaaggtgtcg
ttcgaggcgcacaaggagcggctggctcggatgtacgcggatttccagcggcgggagcag
gagaacggtggccgggcagaggcggccgcgggcaccgtgagcacagtgtccggcctctcg
gacggggccggcctcgccaaaatcaccgagctgcccggggaggacgccgctgatccgtac
gagggattcaagtcgagctcccaaggcgccgacaaagcgaagaggggcagcctgctgagg
gaggtggcccagatggggcaagcggcggcgccgccgctggagggcggacctcctggcggc
tctgcggacgatgctgggacgatggcccaagacgcaggagaggctgaggccatggaggaa
ggagaggctaaagtagaaacagtagaggctgaagtagaaacagtagaggataaagtagaa
acagttgaggctaaagtagaaacagtagaggctaaagtagaaacagtagaggctgaagca
gcagaaggagaagatgaggctaaagcagaagaagcggaagctatggcagccgaaggagag
gcggaaattgaaggagagcataaggtaaaagaacaagaggctaaagttgatgaagaagat
attacagcagaagcagagactacagtggaagaagatgtgtctgaaatggagactgaagaa
gagtctaaagtagaagtcgaggctgaagcagaaaagggcaatgaagatggcgacagtcaa
gaagaggcctcggaagaggctgaaacttcggaaggaggcgtcgtccagagagaggacgaa
gactcggcagagaccgcagcgacggaaggagccaagcggacggaaggggccgaagccgcg
gcaccgggagaccaggacgacgggcccgcgggggatgccgccattagcggaggggaggag
gaggcggcggaagggaaggcagcgattgcgcaatccgcaacgcccacagacgacgacgac
caggcctcggaggtttcgaaggaagcctcggtgtccttcaccgacgcgtcggccgacggc
gaaagggatttggcgcaggcggcggagctgctcgtggacaaggtgtgccgcaccgccgtg
tccgtgatcagcagcgaggcggcggagaaacgcggtgacggggagcctcgggcaagcgac
caaacggactccatcgccgccgccgacaaactgagtgaatcccagcagcccagcgccgga
gacgacggcgcgaaagatgacggcgcgggagacggcggcggtggcaccgaggagaaatcc
caagcagagaagcctcgcggtgatgatgatggtggtggtgatgctgtcaccgctcagacc
tccacactaagtccgaggggcgaggcgacggcggagctcaatgccaagaccctggtggaa
caggccatggagcgcgacgtgaacattcagatggcaaagaccgctcagagtgcgccgacg
ccgcagcaggagggccaacccggcgtcgtcctcaacttccgcccctccacgccgcccatt
tccaccaccgccagcaccgccgccggcgtcgccgccagcgccgccgccgccgccacagat
gaagctcgcgagaaggtggcgggcgcccagcagggcggcgcggcgaggcgcgacggcccc
atgaacgcggggactcaggccgccaccttccgcatccccgaattccagtggtcgagcgtg
caccagcgtctcctcgccgacattctcttcgccctcgagtccgacattcacatctggagg
agccacaccactaagctgctgatggactttgtgaacagcagcgagaactacgtgttcgtg
cacaacatgctgcagatcacctcgcacctggtggacaacctcatcatggtgggcgggggc
ctgctgccaatgctgcaagccgtcacatcgcccgcggacgttgacctggatgcgagccag
catgtggatagcctgcccagcgaaatagcgctcaacttcctgcaccggctgctgaacctg
gtagatgcgctggtcttcgccagctccctcaacttcagcgaggtcgagtccgagaagaac
atgaaggcgggcggcctgctgcgccagtgtctgcggctggtgtgctgcgtggccctgcgc
aactgtgtggagtcccaggagcagcagcgatcccgagcagagagcgggagcgagagctcg
acatcatccaccgccaagggtgcggcggagcccccccccacggtgccagcacgggacccc
gagcggctcctgcagcccatggacgttcaccgcctgcgggcggttgtgttcagggacgtg
gaggacacgaagcaggctcagttcctaggcctcgctgtcgtctactttatctccgtgctc
atggtctccaagtaccgcgacatcctggagagcgggcacggcgaccgcatgcggagtctg
tccgcggcatcccagggcggaggcgcgaagcccggagaagccaaaccggctgtgacgggc
tccgtgcgcagggacaacaacgagcgagcagcgccggaaccggctgtggccgcgagttcc
ggcgacggatcaccgagcgcggggccggacgcgatgagcgagctgctctccacgctgtcc
acggaggtgaagaggtcagacgaggtggcgtccgtggcggccattagcatggtggagatc
ccgctggacagcacgccgatgcccagcccggtcaacggcgggaaacccttcccgcccgcc
tcccatgacgctcctgcgacggcggccgtggcttccccgttggcccacggtgcagaggcc
ggcagcagcagcaaaaaaccagaggtcgctgccgcagaagcagcggcgattaagggtgag
attggtgcatctggcaaggaggagggtggcaaggcctcggaattaagttcagcaccagca
ccggccccgaaggacagtgctgttggtagcactgcaggtgacaagtctcaggaagccggg
tcctcaggtggggccatggttcaggccctgccagacgggaaggcctcggtgccagcaccc
agagacggcaacaacatcacccagcgcctggaacgggccctggagtcgacggcgcctctg
ctgcgcgagatcttcgtcgacttctcgccgtacctgtcgcgcacgctgctcggcagccac
ggccaggagctcctcctgcagggctccggtctggcaagcattaagtcgagcacgtccgtg
gtggagctggtcatgctgctgtgctctcaggaatggcagaactccatccagaagcacgcg
gggctggccttcatcgagctggtcaatgagggccggatcctgtgccacgcgatgaaggag
cacctggtgcgtgtgggcagcgaggccgacttcatcctggagaggcagcgcgccgacgag
atcaacaaacacgccgagttcgagtcgcactgtgcgcagtactcggccgaccgccgcgag
gaggagaagctgtgccaccacatgatcggcgcggctcgacgcagggacggcgtgatggcc
acacgcctccaccaccgcatcgtggacatcttgagcaagcggcacggggcgtggggccac
gtcttgcagagccgagcgcgcgagttctggcgcctggacagctgggaggacgaccagcgg
cgacggcgccgactcgtgcccaatcggcaggggtccacgcacgccgaggccacgctgcgg
ccggccctcgagaccgtgtcggatgaggaggtggctcggcgcgcatgccgggccctgcgg
gagcgcatgacggacgaggagctgcgctcgcccgagacccccagcgagggcgacgccgtc
gatctgagcgtcgacgtcgaggacgaggcctcgggacggagctcccccgagcgcggagac
tgggacctggacactctcaccggccccgtcgccctgagcaccccggcacagctgatcacg
ccgactgtcgccttccgcggcacgctgtccatcaccgccaacgagctgtgcttcgaggtg
gacgaggatgaccccggatttaaggccgttgaccccaaggtgctggcctacacggagagc
cttcacggaaagtggctcttcagcgaggtggaggccatcttctcgcgacgctacctcctg
cagaacacggcgctcgagatcttcctcagcactcgcacatcggtcatgttcaacctccca
gatgcgacgatcgtcaagagcgtcgttcacctgctgccacgcgtcggcatcggcaccctc
tatggcctaccacaggctcggcggtattcgctcgccagcccccgccagctcttcaaggcc
tccaacatgacccagcgctggcagcaacgggacgtctccaacttcgagtacctcatgttc
ctcaacaccatcgccggccggacgtacaacgacctcaaccagtatccggtctttccgtgg
gtcatcgcgaactacgactccgaggagcttgacctcacgctgcccagcaacttccgggac
ctctccaagcccgtgggggccctgaacccgcagcgggccgccgtgttcgccgagcgctac
tcgtcgtgggacgacgcagacatcccagccttccactacggcacgcactactccaccgcc
gccttcgtgctcatgtggctccttcgcgtggagccgttcaccaactacttcctgagcctg
cagggcggaaagttcgaccacgccgaccgcaccttctcctccgtcgcgcgcgcctggcgc
aacagccagcgcgacaccagcgacgtgaaggagctcatccctgagttcttctacctgcca
gagatgttcaccaacagcaacgactacaacctgggggtgacagacgccggcgtggcggtg
tgcgacgtcgtgctcccgccctgggccaagacgggcgaggagttcgtccgcatcaatcgc
gcggcactcgagagcgagatcgtgtcatgccagctgcaccagtgggttgacctgatcttc
ggctacaagcagcgagggccggaggccattcgcgccatgaacgtcttctactacctcacc
tacgagggcgccgtcaacatggcctccatccgcgaccgcgtgacgcgtgaggcggtggaa
gcccagatcaggagctttgggcagacgccggcgcagctgatggtggagccgcacgcgccc
cgcagctcggccatgcacatgacgccgatgatgttcagcgacaagagccagcaggaggtg
atcatggtcctcaagttcccgtccaactcccctgtgacgcacgtggcagccaacacgggc
cccatgcagagccccccggccatcctcactatcacctgcagccgccttttcgcgatcaac
aagtggaacggcctctgtggttcgctggagagatccagtgcgtccatggaagacattatg
cggctgcccgtcgaaattgatcccttgttggtggcgaacatgggcctgcaccggcggcag
atcgtggaccccgtggaccacagcgtgcccacgtgcgtcaacaccttcaccgtgacggcc
gacaatcgcttcgtcatgctcggcggattctgggacaagagcttccgcgtctattccacg
gacaccggtcggctgaagcaggccatgttcggccactgggacgtggtgacgtgcctggcg
cgctccgaggtgggcgtggggggcgactgctacgtggcgtccggctcgagggacgcaacg
gtgctgctgtggcgctggagcggccgggagctcgcactgggggaccgcaccacgcacgga
aacatgcgcagcccccgcgccatcctgacgggccacgacacggaggtgacgagcgtcgcc
gtgagcaccgagctcggcctcgtcatcagcggctccatcgggagcccctgcctcatgcac
acccttgcgggcgagctgctgcgtgcgctggagggagcgagcgccacggcaacgccgctc
ctgctcgccatctcccaggacgcgctctgcttcggttactacgacgacgggacgctgctc
agcttcagcgtcaacggacgactctctgcgcgaacgccgaccggcgacaccacacgggcc
atggtgctgagcgcggatgggcagtacgtgctgaccgggggggacaagggagtggtggag
gtgtggcgcgcctacgacctcgccaaactctacacctaccccatgtgcgactcgtccgtc
agggcccttggcctgtcctatgaccagagggttgtgattgcgggcatggcgacgggaagc
atcgttctcttccacatcaacttcaaccactggcactgcgagtaccaggagcgctactcc
gcgccctag
DBGET
integrated database retrieval system
