Lethenteron reissneri (Far Eastern brook lamprey): 133343031
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Entry
133343031 CDS
T09663
Symbol
TRIM2
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 2
KO
K11997
tripartite motif-containing protein 2/3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133343031 (TRIM2)
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133343031 (TRIM2)
BRITE hierarchy
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
Invasin_D3
zf-ANAPC11
Prok-RING_4
zf-C3HC4_4
YtkA
Big_3_5
IL11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
133343031
NCBI-ProteinID:
XP_061408455
LinkDB
All DBs
Position
16:13946254..13982542
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AA seq
808 aa
AA seq
DB search
MATSSSSSSADGVAVGTSSASSSSSPVVRQIDKQFLICSICLERYINPKVLPCLHTFCEK
CLQNYIPAQSLTLSCPVCRQTSILPERGVSALQNNFFITNLMEVLSTQGDGAAGTCPGVA
GSGEPGVAGCAGTGDGAAPGAGGGVGGGVPGGVVCVVIGQPLSCPNHQGKVMEFYCESCE
TAVCHDCTNAEHLEHPSVLLKDVVEQHKASLQGQVELVQARLPELDSAVSMVSEIAKQLL
AQRDEALGEIRAAFDDLTKALEQRKSALVTDTEGLYTSKQKVLQAQLDTLVQGRANIRSS
CDFTAQALSQGGETEVLLVRKQMSERLAQLAEQSFPLHPLQNDHLEFRAEAADPLRRSLL
NLGALVTTHAVACQTVATGDALRQAVVGQPACVTVTTKDKDGELVRSGSAALTVEICTPE
GSVVDGEVTDNRNGTYELTYTLPRDGEFTLALRLYDQHIRGSPFRLRGLKPSDLSPGAGD
AARRRGKSPGAGGGGXGGGGGGAAPSSAHVRQRALKRPSSMYSTGRRKENPIEDDLIARI
GTKGRNKGEFTNLQGVATSGNSRIVIADSNNQCVQVFTNDGTFKSRFGVRGRSPGQLQRP
TGVAVHPNGDVIVADYDNKWVSIFGADGKFKSKLGAGKLLGPKGVAVDRNGHIIVVDNKA
CCVTAFQPSGKLVTRFGSRGNGDKQFAGPHFVAVNSNNDIIVTDFHNHSVKVFNSDGEFL
LKFGSNGEGNGQFNAPTGVAVDALGNIIVADWGNSRIQVFDSSGSFLSYINTSADPLYGP
QGLALTCDGHVIVADSGNHCFKIYRYLQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagcagcagtagcagcagcgcggacggggtcgccgtgggaaccagcagcgcc
agcagcagctcgagccccgttgtgcgacagatcgacaagcagttcttgatctgcagcatc
tgcctggagcgctacatcaaccccaaggtcctgccgtgcctgcacactttctgcgagaag
tgcctccagaactacatcccagcccagagcctgacgctgtcgtgcccggtgtgccgccag
acgtccatcctccccgagcgcggcgtctccgcgctgcagaacaacttcttcatcacgaac
ctcatggaggtgctgagcacgcagggcgacggcgccgcgggcacgtgccccggcgtggcc
ggctccggcgagcccggcgtcgcgggctgcgccgggacgggagacggcgcggcccccggg
gccggcggcggcgtcggcggcggcgtccccggcggggtggtgtgcgtcgtcatcggacag
ccgctctcctgccccaaccaccagggcaaggtgatggagttctactgcgagtcgtgcgag
acggccgtgtgccacgactgcaccaacgcggagcacctggagcacccctcggtgctgctc
aaggacgtggtggagcagcacaaggcgtccctgcagggccaggtggagctcgtgcaggcc
aggctgccggagctcgactctgctgtcagcatggtgtcggagatcgctaagcaactgctg
gcccagcgggacgaggcgctcggggagatccgcgccgccttcgacgacctcaccaaggcc
ctggagcagcgcaagagcgcgctcgtcacggacacggagggcctctacacctccaagcag
aaggtgctgcaggcgcagctggacacgctggtgcaaggccgcgccaacatccgcagcagc
tgcgacttcacggcgcaggcgctgagccaaggcggcgagacggaggtgctgctcgtgcgc
aagcagatgagcgagcggctggcgcagctggcggagcagagcttcccgttgcacccgctg
cagaacgaccacctggagttccgcgccgaggccgccgacccgctgcgccgctcgctgctc
aacttgggcgcgctcgtcaccacgcacgccgtcgcctgccagaccgtcgccaccggggac
gccctgcggcaggcggtggtcgggcagccggcgtgcgtcaccgtcaccacgaaggacaag
gacggcgagctggtgcgctcaggctcggcggcactcaccgtggagatctgcacgcccgag
ggcagcgtggtggacggcgaggtcaccgacaaccgcaacggcacctacgagctcacgtac
acgctgccgcgcgacggcgagttcacgctcgcgctgcgcctctacgaccagcacatccgc
ggcagccccttccgcctgcgcggcctcaagcccagcgacctgtcgcccggcgcgggggac
gcggcgcgccgccggggcaagtcgccgggcgccggcgggggaggcnntggcggcggcgga
ggaggcgcggcgccgtcgagcgctcacgtgcgccagcgcgccctcaagcggccgtccagc
atgtacagcaccgggcggcggaaggagaaccccatagaggacgacctcatcgcgcgcatc
gggaccaaaggaaggaacaagggagagttcacgaacctgcagggggtcgcgacctccggg
aacagccgcatcgtcattgccgacagcaacaaccagtgtgtgcaggtgttcaccaacgac
gggacgttcaagtcgcgcttcggcgtgcgaggtcgctccccggggcagctgcagcggccg
acgggcgttgccgtccaccccaacggggacgtcatcgtggccgactacgacaacaagtgg
gtcagcatcttcggcgccgacgggaagttcaagagcaagctgggcgccggcaagctgctg
gggcccaagggcgtggcggtggaccgcaacgggcatatcatcgtggtggacaacaaggcg
tgctgcgtcacggccttccagccgagcggcaaactcgtgacgcgcttcggcagccggggg
aacggggacaagcagtttgcaggacctcactttgtcgcagtaaacagcaacaacgacatc
atagtcacggatttccacaaccactccgtcaaggtcttcaactcagacggggagttcctg
ctcaagttcggctccaacggagaaggcaacgggcagttcaacgcccctaccggcgtggct
gtggacgccctgggcaacatcatcgtggccgactggggcaacagtcggatacaggtgttc
gacagctccggctcgttcctctcttacatcaacacctcggccgacccactctacgggccc
cagggcctggctctcacctgcgacggccacgtcattgtcgccgactcgggcaaccactgc
ttcaagatttaccgatacctgcagtga
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