Lethenteron reissneri (Far Eastern brook lamprey): 133343069
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Entry
133343069 CDS
T09663
Symbol
CTR9
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133343069 (CTR9)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
133343069 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_7
TPR_6
ARM_TT21_5th
TPR_11
TPR_Slam
TPR_9
ARM_TT21_4th
ARM_TT21_C
TPR_BSK1_C
ANAPC3
Motif
Other DBs
NCBI-GeneID:
133343069
NCBI-ProteinID:
XP_061408526
LinkDB
All DBs
Position
2:complement(10857624..10886354)
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AA seq
1176 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYRQGKPEDF
VKLLEAARVDGTLDYRDHEKDQMTCLDTLAAYYVQQARREKNKDVKKELLTQATLLYTMA
DKIIMYDQNHLLGRACYCLLEGEKMEQADAQFHFVLNQSPSNIPALLGKACIAFNKKDFR
GALAYYKKALRTNPNCPAEVRLGMGHCFVKLSKPEKAQLAFMRALELNPKCVGALVGLAI
LELNKKEADSIKNGVQLLSKAYTIDSSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTD
VEAMQAESCYQLARSFHVQGDYDQAFQYYYQATQFASPNFLLPYFGLGQMYIYRGDRDNA
AGCFEKVLKAYPNNYETMKILGSLYATSNDQEKRETAKGHLKKVTEQYPDDVEAWIELAQ
ILEQSDIQGALSAYGTATRILQEKVQADVPPEILNNVAALHFRLGNLGEAKKYYAASLDR
AKAEAQHDEHYYNAISVTSTYNLARLHESTCNYHGAEQHYKNILREHPNYVDCYLRLGCM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWQPGQKKFERILKQPATQND
AYSMLALGNVWLQTLHQPTRDKEKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GCIREARDVFAQVREATADVCDVWLNLAHIYVEQKQFISAVQMYENCLKKFFKCQNTEVL
LFLARAYFKCGKLAECKQTLLKARHVAPSDSVLMFNVALVLQRLATSVLRDEKSNLKAVL
SAVKELELAQRYFSYLSKSGDRMKFDLAQAAAEARQCADLLSQAQYHVSRARKLDEEERS
QRAKQEKEKEELKLKLMQEQEEKRRRLSEEQRKLLETRAQFVEKTKGLLVFSERAEPQRE
KRKGGGGGGKRRKGADYEEFVNDGSEDDLPTARKKKQRRASSSEGEGGDGTDGERSRKRG
GRKARSRHQSGGQDDGAPRSKKPRKQPQKKERQRKEEAKGERLSAAMMKKVKSKAIISSS
DDSSDDDALKIADEGGKASGSASDSDGDEAPKQQRQRLVSDSESDGGGGGQSPRAPSDAG
SRRSRSAHSSSEDEGGRAGRDDDDDDGGRRGGSNSDEDEEAAVGGASAGRRRRGNIDDDD
EEEEAAAVSGSERDGSGSPPASARSASPVDSADDSQ
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcggctccatcgagatcccgctcagggacacggacgaggtgatagagctcgac
tttgatcagctgccggagggtgacgaagtcatcagcattctcaagcaggagcacacgcag
ctgcacatatggatcgcgctcgcgttggagtactaccggcagggcaagccggaggacttt
gtgaagctgctggaggcggcgcgcgtggacggtacgctggactaccgcgaccacgagaag
gaccagatgacgtgcctcgacacgctggccgcctactacgtgcagcaggcgcggcgcgag
aaaaacaaggatgtcaagaaggagctgctcacccaggccacgctcctctacaccatggcc
gataagatcatcatgtacgaccagaaccatctgctcggccgagcctgctactgcctcctc
gagggagagaagatggagcaggcggatgcacagttccactttgtgctcaaccagtcgccc
agcaacatccccgcgctgctcggcaaggcgtgcatcgcgttcaacaagaaggatttccgc
ggggcgctcgcctactacaagaaggcgttacgcactaaccccaactgcccagcggaggtt
cgtctgggcatgggccactgcttcgtgaagctgagcaagccggagaaggcgcagctcgcg
ttcatgcgcgcgctggagctcaaccccaagtgcgtgggcgccctcgtcggcctcgccatc
ctcgagctcaacaagaaggaggccgactcgatcaagaacggcgtgcagctgctgtccaag
gcctacaccatcgacagcagcaaccccatggtcctcaaccacctggccaatcacttcttc
ttcaagaaggattacagcaaagtgcagcacctggcactgcacgccttccacaacacggac
gtggaggcgatgcaggccgaaagctgctaccaactggcgcgctcgttccacgtgcagggg
gactacgaccaggccttccagtactactaccaggcgacgcagttcgcctcgcccaacttc
ctgctgccctactttggcctgggccagatgtacatctaccgcggcgaccgggataacgcg
gccggctgcttcgagaaggtgctcaaggcctaccccaacaactacgagaccatgaagatc
ctgggctcgctctacgccaccagcaacgaccaggagaagagagagactgccaagggtcac
ctcaagaaggtcacggagcagtaccccgacgatgtggaagcctggattgaattggctcag
atccttgagcaatccgacatacagggcgcgctgtcggcttacggcacggcaacacgcatc
ctgcaggagaaggtgcaggccgacgttccccccgagatcctcaacaacgtcgccgcgctg
cacttccgcctgggcaacctgggggaggctaagaagtactacgcggcgtcgctggacagg
gcgaaggccgaggcccagcatgacgagcactactacaacgccatttcggtgacgagcacg
tacaacctggcgcgcctgcacgagtccacgtgcaactaccacggcgcagaacagcactac
aagaacattctccgcgagcatcccaactacgtcgactgctacctgcgactcggctgcatg
gcgagagacaaggggaatttctacgaggcctccgactggtttaaggaggccctgcagatc
aaccaggaccacccagacgcctggtccctcatcgggaaccttcacctcgccaagcaggag
tggcagccggggcagaaaaagttcgagcgaatcctgaagcagccggcgacgcagaacgac
gcctactcgatgctggcgttgggcaacgtgtggctgcagacgctgcaccagcccacacgg
gacaaggagaaggaaaaacgtcatcaggatcgtgctttggccatctacaaacaggttctg
aggaacgaccccaaaaacctgtacgcagctaatggaatcggcgccgtgctggcccacaag
ggctgcatccgcgaggcccgggacgtgtttgcccaggtgcgcgaggccacggcggacgtg
tgcgatgtgtggctcaacctggcgcacatctacgtggagcagaagcagttcatcagcgcc
gtgcaaatgtacgagaactgcctcaagaagttcttcaagtgtcagaacacggaggtcctc
ctgttcctggcgcgggcgtacttcaagtgcggcaagctggccgagtgcaagcaaaccctt
ctcaaggcgcggcacgtggcgcccagcgacagcgtgctcatgtttaacgtggcgctggtg
ctgcagcgtctcgccacgtcggtgctgcgtgacgagaagagcaacctcaaggccgtgctg
agcgccgtcaaggagctcgagctggcgcagaggtacttcagctacctgagcaagtctggc
gaccgcatgaagttcgacttggcccaggcggcagctgaagccaggcagtgcgccgacctg
ctgagccaagcgcagtaccacgtgtctcgagccaggaagctggacgaggaggagcgctct
cagcgcgccaagcaggagaaggagaaagaggagctcaagctgaagctcatgcaggagcag
gaagaaaagcggcgccggctctcggaggagcagcgcaagctcctggagacacgagcgcag
tttgtggagaagaccaagggcctgctggtgttcagcgagcgcgccgagccccagcgcgag
aagcgcaagggcggaggcggcggcggcaagaggcgcaagggcgccgactacgaagaattt
gtgaacgacggctcggaggacgacctgccaacggcgcgcaagaagaagcagcgtcgagcg
agcagcagcgagggggagggcggcgacggcaccgacggggagaggagtcgcaagcgaggt
ggtcgtaaggccaggagccgccaccagagtgggggccaggatgatggggccccccgctcc
aagaaacctcgcaagcagccgcagaagaaggagcggcagcgcaaagaggaggcgaagggc
gagcgcttgtcggccgccatgatgaagaaggtgaagtcgaaggccatcatctcgtcgagc
gacgactcctcggacgacgacgccctcaagatcgccgacgaggggggcaaggcgagcggc
tccgcctcggactccgacggggatgaggcccccaagcagcagcgtcaacgcctcgtgtcg
gacagcgaatcggacggcggcggcggcgggcagagcccccgtgcgcccagcgacgccggc
agccgtcgctcgcgatccgcccactcctcatcggaggacgagggaggacgcgccggccgt
gacgacgacgacgacgacggtgggagacgcgggggcagcaactccgacgaggacgaggag
gctgcggtggggggggcctcggcagggcgtcgtcggcgtggcaacatcgatgacgacgac
gaggaggaggaggcggcggcggtgtcgggctctgagcgagacggctcgggcagcccccca
gcctccgccaggtcggcctcgcccgtcgactcagccgacgacagccagtga
DBGET
integrated database retrieval system
