Lethenteron reissneri (Far Eastern brook lamprey): 133343085
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Entry
133343085 CDS
T09663
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04080
Neuroactive ligand-receptor interaction
lrj04082
Neuroactive ligand signaling
lrj04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133343085
04082 Neuroactive ligand signaling
133343085
04519 Cadherin signaling
133343085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133343085
Ion channels [BR:
lrj04040
]
Ligand-gated channels
GABA-A
133343085
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
133343085
NCBI-ProteinID:
XP_061408557
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All DBs
Position
16:15657908..15673172
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AA seq
470 aa
AA seq
DB search
MRLKRHASHCPGALAARVLCLSLCCLQQASCCPGQLSFPPAQGADQDDTAVFTQILDRLL
DGYDNRLRPGLSGATEVKTDIYVTSFGPVSDTDMRCNIPSVQEYTVDVFFRQSWRDLRLK
FNGPMKILPVNNMMVSHLWTPDTFFYNSKKSVAHNITTPNKLLRICDDGSLLYTMRLTIN
AECPMILEDFPMDTHACPLKFGSYAYTSSEVFYTWTHGPANSVIVAEDGSRLNQYNLINH
TVGSELSRSSTGVYTVMTTRFHLRRNIGYFVIQTYLPCIMTVLLSQVSFWLNREAVPART
VFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRAWA
WNGKFPAPSKKKDAVTLIKKRKNAYTTGLCPAGHRTLLAREAALLSISQKVAPHHGQHDS
RPLDYKKTYNSVSKIDKLSRIVFPILFGIFNLVYWATYLNRETHASGALP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaagcgccacgcatcgcactgccctggcgcgttggctgcgcgggttctctgc
ctcagcctctgctgcctgcagcaggccagctgctgcccaggtcagctgagcttcccgccc
gcgcagggcgccgatcaggatgacaccgccgtgttcacgcagatcctggatcgcctcctt
gatggatacgacaaccgactgcggccagggctcagcggagccactgaggtgaagaccgac
atctacgtcacaagctttgggcccgtgtcggatactgacatgcgctgtaatatcccatct
gtccaggagtacacggtggatgtgtttttccgtcaaagctggagggacttacggctcaaa
ttcaacgggcccatgaagattctgcctgtgaacaatatgatggtgtctcacctatggact
ccagacacattcttctacaacagcaagaagtccgtggcacacaacatcaccactcccaac
aaactcctgaggatctgcgatgacggatctctgctgtacaccatgcggctgactattaat
gcagagtgcccgatgatattggaggatttcccgatggacacgcacgcctgcccactcaag
tttgggagctatgcatacactagctccgaagtgttctacacgtggacgcacggccccgcc
aactctgtgatcgtggcagaggacggatctcgactcaaccagtacaacctgatcaaccac
acggtgggcagcgagctcagccgctccagcaccggagtgtacacagtgatgaccacccgc
ttccacctgcgcagaaatatcggctacttcgtgatccagacgtacctgccgtgcatcatg
accgtgctcctttcccaggtctccttctggctcaaccgcgaggcggtgccagcacgcact
gtgttcggcgtcaccacagtgctcaccatgacgacgctcagcatcagcgcacgcaactcg
ctgcccaaggtggcgtacgcgacggcaatggactggttcatcgccgtatgctacgccttc
gtcttctcagcgctcatcgagttcgccaccgtcaactacttcaccaagagagcctgggcc
tggaatgggaaattccctgcgccatcgaagaaaaaggacgcggtgactttgatcaaaaag
cgcaaaaacgcctataccacaggcctgtgccccgcgggccaccgcacgctgctggccagg
gaggcagctctgctcagcatctctcaaaaggtcgcgccgcaccacggacaacatgacagc
agacccctcgactacaagaaaacctacaacagcgtgagcaagattgacaagctctcccgc
atcgtgtttcccatcctttttggaatcttcaacctggtgtactgggccacgtacctgaac
cgtgagactcatgcaagtggtgcgttgccttag
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