Lethenteron reissneri (Far Eastern brook lamprey): 133343384
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Entry
133343384 CDS
T09663
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133343384 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133343384 (CNOT2)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133343384 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133343384 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133343384
NCBI-ProteinID:
XP_061408951
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All DBs
Position
2:12026856..12050689
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AA seq
526 aa
AA seq
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MFGAPKKRFGEEGEPEFDGNMYFNQSSVFSHRPDKDMLGSPSPSGQLSQFGASLYGPQNP
LGLQMRGMGGTAPQLNRSLSQGAPLPGHVTPTSVGPPMPPPHAPSSPSRGILALNPRMNH
VQPIGLSNRANAVGSSGMGSPNRSSPNLLSMQKQPPPPPPPQQQQPPRSTYGLGGMSGFG
LGRSQGYSLSNAITNNSYNSTGGSDTVAGLDLSDFPALAERNRRESNGNPAPLPNPMAGR
TPYVGMVTKPASEQPQDFSIHNEDFPALPGVNLNKEPTAAPDDNKTLTNQSGQTTGSVTE
GPKFPGDKGSNTNANQQKKGIQILQDGRVTNIPSGMVTDQFGMIGLLTFIRAAETEPSLV
HLALGSDLTTLGLNLNSPENLYPKFASPWAEAPCRPQDIDFHVPSEYLTNIHIRDKLAPI
KLSRYGEDLLFYMYYTNGGDILQLAAAVELYNRDWRYHKDERVWITRAPGMEPQMKTNTY
ERGTYLFFDCHNWRKVAKEFHLEYDKLEERPHLPTSLNYNPAQQAF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgctccaaagaagcggttcggggaggagggagagcccgagtttgatggaaac
atgtacttcaaccagtcgagtgtcttctcacacaggcccgacaaagacatgctgggctct
ccgtcaccatcgggtcagctgtctcagtttggcgcaagcctctacggcccacaaaacccg
ctgggtcttcagatgcgtggaatggggggcacagccccgcagctcaatcggagtttatcg
cagggtgcccccttgccaggacacgtgacccctacgagtgtggggccccctatgccgcca
ccacatgcgccgtcatcacccagccggggcatcctggcgctgaacccacggatgaaccac
gtgcagcccatcggcctgtcaaaccgtgccaatgcagtgggctcctctggcatgggcagc
cccaaccgcagttcaccaaacctgctgtccatgcagaagcagccgccaccgccgccgcca
ccgcagcagcagcagccaccgcgcagcacctacggcttaggagggatgtcaggatttggc
cttggcaggagccagggttacagtctgagcaacgcgatcaccaacaacagctacaacagc
acgggaggcagcgatacggtggccgggttggatctgtctgactttccggcgctcgcagaa
cggaacaggagagaaagcaacggcaacccagcgcccctccccaaccccatggctggcagg
acgccatatgttggcatggtgacaaagcccgcgagcgaacagccccaggacttctcaatc
cacaacgaggacttcccggcactgcctggcgtgaacctcaacaaggagcccacggccgca
cccgacgacaataagacgctgaccaatcagagcgggcagaccacggggtcggtgacggag
ggacccaagttccctggagacaagggcagcaacaccaatgcgaaccagcaaaagaagggc
atccagatccttcaagacggccgcgtgacgaacatcccgagcgggatggtgacggatcag
ttcggcatgatcggcctcctcaccttcatccgggcggctgagacggaaccgtctctcgtg
cacctggctctcggcagtgacctcaccacactcggcctcaacctcaactcccccgagaac
ctctaccccaagttcgcgtcgccatgggcagaagcgccgtgcagacctcaggatatcgat
tttcacgttccttcagaatacctgacgaacattcacatcagggataagcttgctcccatc
aagctgagtcggtacggggaggatctgctcttctacatgtactacaccaacgggggcgac
atcctgcaacttgccgcggcggtagaactgtacaaccgcgactggcggtaccacaaggac
gagcgggtgtggatcacgcgggcgcccggcatggagcctcagatgaagacgaacacgtac
gagcgtggcacctacctcttcttcgactgccacaactggaggaaggtcgctaaggagttc
cacctggagtacgacaagctggaggagaggccccaccttcccacgtcgctcaactacaac
ccggcccagcaggctttttga
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