Lethenteron reissneri (Far Eastern brook lamprey): 133343480
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Entry
133343480 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133343480
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
133343480
NCBI-ProteinID:
XP_061409115
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All DBs
Position
17:complement(11119127..11167255)
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AA seq
1486 aa
AA seq
DB search
MADLDKALQDLRLFVQSGSAAPGQTGRTTIIQTSEADPSARMISQKSNKKISFEGLSVSG
SGAQVTAGGAGGSQHTDLLILEEGDLAASGSAGLSQSSSAWSSGGGGLLLSFDSVGAGAG
GGLAERAIYEEVRYGGADGEAQGFTTAGRQVETAWSSGRGGGFVSSGAAAGGEVLARDRL
DLSSGSSGRTFAGEVRGGESGSFSYAHSTSDAQLIGGGGTKVVHSTTTSGGGGGSWWRRG
GGGGGGGAVGQSVIQTTTKRIEHGPVVGATFSTGSRGGGGEVTHQSSLVSGPSRGQSGTQ
VTSRAVEKTVSPSGMPALPPKSGTTVTTAAHSSRKSTGVTPATPPSPGGAARSATMSSTQ
FGTRGRSPLSSLERRSAKPTVNLSYDIGSSSDNSSPEVTRKEINVARGRSQSRESQIRAR
LQSASPDGRWADLNDVKRLLRGTRSSSSSPPRTLPIPKKPPLPSKREERSDEEALIKVDE
SISVYGQYGMESSKAGGGMDPKLSAYAMHASLPGGAPMMAQAASAGGGGGVGGGGGGIGF
RGGSQAMQGGYGMMGMPMGSGQHHGMGPMYSDAMMQKQAEQQFLVNDLKGGPMFQPEFFP
KLESEKQYFVNNLRAGQLEEEKRQLMAASAARKGDTIDSRAETVVMSKAVGAEKAAVMEV
RTKENGGKVCACCSWWMFILALLLAWLFLLGLLLGLLSLANEVSSLKSRVIDLEGQKTSD
GVRLRQVGNQVFLEGALTDSDMGASGGRSGSSLGAAGGRGRSGGGLADLNEAGLESLITS
ILASEMRSDNIVARFRGQQGDKGDIGQKGSKGDSGDRGAEGTVGFPGIRGDPGVQGEVGL
PGPKGQPGLQGMAGPPGPEGPKGIKGSQGEPGTEGPAGPRGREGLPGPRGETGPPGAGEK
GERGGLGESGLPGSPGLPGSIGPKGLQGIQGPPGFQGSPGTAGSKGDAGTPGAKGDKGID
GAPGVKGEAGERGQRGAAGEVGARGPAGTPGEPGVKGVAGDGGAEGRPGSRGEPGLVGLP
GPRGPQGNQGAQGPQGPPGQAGTPGEPGKPGIPGEAGSKGETGNPGKILNFDGSQSFAVP
GPPGAPGPPGQPGVQGVPGILGPSGSAGIPGEKGERGDRGPKGDQGEPGDRGPPGRARAT
DEVQGIPGPPGLPGPPGPPGPKGRDGLSGSGSDVQGPRGLPGPPGPPGPPGAGSIGPPGL
TGPPGPKGDYVTGPPGPMGPPGNDGKPGEQGLPGLPGSVGNPGNAGQGQPGEPGPPGIPG
FAGPPGLDGPLGPPGQKGDVGDTGYPGQPGEPSREPGPPGSPGQPGYPGDPGPPGEYGAT
GQPGEPGPMGPPGSPGTPGEKGESGDPGVPGAPGIPGRPGAQNGPGRGGGVVGIPGPPGP
PGAPGPAGGPPGPLGAPGLPGPAGSPGVPGSTLPIGAFARFVGPPGPPGQPGKGSEDGGF
GMKGQKGEPGIPGAAGVPGATGQEGPAGPKGDRGDSPYRRRRSIAL
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctggataaagcgctacaggatctccggctctttgttcagtccgggtctgca
gcaccagggcaaactgggaggacaaccataattcagacttcagaagcggatccatcggca
cgcatgatcagccaaaaatccaacaagaagatttcattcgaaggcctgagcgtgtctgga
tcaggggctcaggtgacggctgggggggcggggggctcgcagcacaccgaccttctcatc
ctggaggagggtgacctggctgcgtccggctccgccggtctctctcagtcgtcttctgcg
tggagctccggcggcggcgggttgctgctgagctttgactcggttggtgcgggggccggg
ggtggccttgccgaacgagcgatctacgaagaagtccgctacggcggcgctgacggggaa
gcccagggcttcaccacggcgggccgacaggtggagaccgcctggtcctcggggcgtgga
ggaggtttcgtctcgtcgggagcagcggcaggtggcgaggtgctggcgagggaccggctg
gatctgtcttcggggtcttcgggtcgcacgttcgccggcgaggtgagaggcggtgagtcc
ggctctttctcctacgctcactcaacgtccgacgcgcagctcattgggggtggaggcacc
aaggtcgttcattctaccacgacgagcggcggaggtggtggaagctggtggcggaggggc
ggtggtggtggtggtggaggggccgtgggccaaagtgtcatccagaccacgaccaaacga
atcgagcacggccccgttgtgggcgcgaccttcagcaccggcagccgaggaggaggtggc
gaggtgactcatcagtcatctctggtgtccggtccgagtcgtggtcagtcggggactcag
gtcaccagccgcgccgtggagaagacagtgtcacccagtgggatgcccgccttgccgccc
aagtccggcacgaccgtgaccacagccgctcactcctcccgcaagtccacgggcgtgacc
cctgccacgccgcccagcccgggtggcgccgctcgctcggccacgatgagctccacgcag
ttcgggacccggggccgctcccccctctccagcctggagcgacgcagcgccaagcccacg
gtcaacttgagctacgacataggaagctcgagtgacaattcttcccccgaagtcacccgc
aaggaaatcaatgttgcacgaggtagaagccaatctcgagagagccagatccgagctcgc
ctgcagagcgcttctcccgacggacgatgggccgacctgaacgacgtgaagcgccttctg
cgcggcacgcgctcctccagctcgagccccccgcgcacgctgcccatccccaagaagccc
cccctgcccagcaagagagaggagcgctccgatgaggaggccctcatcaaagtggacgag
agcatttcagtgtacgggcagtacgggatggagtcatcgaaggcaggcggtggcatggac
cccaagctgtcggcatatgccatgcacgccagcctgcccgggggagccccgatgatggcg
caggcggcatcggcggggggaggaggaggagttggaggaggaggcggaggaattggcttt
cgtgggggcagccaggccatgcaaggtggctacggcatgatgggaatgcccatgggatcc
gggcagcaccacggcatgggtcccatgtactcagatgccatgatgcagaagcaggctgag
cagcagtttctcgtcaacgacctcaaaggaggacccatgtttcagccggagttcttccct
aaattggagtcggagaagcagtattttgtcaacaacctcagagctggacaactggaggaa
gagaagaggcagttaatggcagcgtctgcggccaggaaaggggacaccatcgactcacgg
gccgagacagtcgtgatgagcaaggcagtcggcgccgagaaggcggcggtgatggaggtg
cgcacgaaggagaacggagggaaggtgtgcgcctgctgctcctggtggatgttcatcctg
gcgctactgctcgcctggctcttcctgcttgggctgctcctgggcctcctctccctcgcg
aacgaagtatcgtcgctgaagagccgcgtcatcgatctggaggggcagaagacgtcagac
ggcgtgcggctgcgtcaggtgggcaaccaagtgtttctggagggggcgctcaccgactcc
gacatgggggccagcggcgggagaagcggctcctcgttgggggctgccggcggccgtggc
cgctccgggggggggctcgccgacctcaacgaggccggcctggagagcctcatcaccagc
atcctcgcctctgagatgcggtccgacaacatcgtggcccggttcagaggtcaacaggga
gacaaaggagacattggacagaaaggttcaaagggagactcaggcgatcgaggtgcagag
ggcacggtcggcttccctggcatcagaggggatcccggagtgcagggagaagtcggtctg
ccaggccccaagggtcagcctggtttacaaggaatggctggaccacccgggccagaggga
ccgaagggaattaaaggaagccaaggggagccaggcactgaggggcctgccgggccaagg
ggcagggagggcctgcccggcccacgcggagaaacagggcctcccggggccggggagaag
ggagagcgaggtggccttggagaatcaggtctccctgggtcccctggtctgcctggttct
attggtcctaaaggtttgcaaggcattcaaggaccacctggattccaaggcagtcccggc
acggctggttccaagggtgatgcaggaacccctggtgcgaaaggtgataagggcattgac
ggagctcctggagttaaaggcgaggctggtgaacgaggacagagaggtgctgccggcgaa
gtgggtgctcgaggtcctgccgggacccctggggagcccggagtcaagggggtggcaggt
gacggtggtgctgaggggcggccaggatccagaggcgagccagggcttgttggacttcct
gggccgaggggacctcaaggaaaccaaggcgctcaaggcccacaaggaccacccgggcaa
gcaggtactcctggagagccagggaaaccaggaatccctggagaagcaggctctaaagga
gaaactggcaatcctggaaagattttgaatttcgacggctcgcagagctttgctgtcccc
ggcccccctggtgcccctggcccccctggccaacccggagttcagggagttccaggcatt
ttgggaccttcaggaagtgcaggcatcccaggagagaagggagagagaggagaccgagga
cccaagggagaccagggagagccaggggacaggggcccgcctggacgagccagagcgacc
gatgaggtgcaaggcatcccgggacccccgggacttcccggaccccccgggcctcctggg
cctaaaggcagagatgggttatcgggctcaggatcagatgttcaggggccacgcggatta
ccagggcctccgggccccccaggtcctccaggtgcgggctcaattggccctcccggattg
acaggaccacctggaccgaagggcgactatgtcactggaccaccagggccgatggggcct
ccaggaaatgacgggaaacctggggagcaggggctgcccggtctcccaggttcagtcggc
aatcctggtaacgcgggtcaagggcaaccaggagagcccggtccacccggaatcccaggc
tttgctggaccaccaggactggatgggccattgggtccacctgggcaaaaaggagatgtt
ggtgacactggatatccaggccagccaggagaaccaagccgagagccaggcccacctggg
tctcctggtcagccaggctacccaggagatcccggcccacccggggaatacggcgccact
ggccaacctggcgaacccggccctatgggcccacctgggagccctggaacaccgggcgag
aaaggcgaaagcggagatcccggcgtgcccggagctccaggaatcccagggcggcctggt
gcccagaatggaccagggcgtggtggcggtgttgtgggaattcctgggccaccaggacct
cctggcgcaccgggaccagcaggagggcctccaggaccattgggtgctccagggctccct
ggccctgcagggtctccaggtgtacctggttccaccctccctatcggagcctttgcgagg
tttgtggggcctcctgggccacctggacaacctggcaagggctcagaagacggcggtttt
ggcatgaagggacagaaaggggagccgggcattccaggtgcagcaggagttcccggggca
actggtcaagagggacctgcaggacccaaaggagacagaggtgactctccatacagacgg
aggagaagcatcgcgctataa
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