Lethenteron reissneri (Far Eastern brook lamprey): 133343488
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Entry
133343488 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 2 protein-like
KO
K06839
slit 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lrj00536
]
133343488
Glycosaminoglycan binding proteins [BR:
lrj00536
]
Heparan sulfate / Heparin
Axon guidance molecules
133343488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_2
LRR_9
Laminin_G_1
EGF_TEN
LRRNT
LRRCT
hEGF
LRR_1
LRR_14
EGF_Teneurin
LRR_EndoS
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
133343488
NCBI-ProteinID:
XP_061409127
LinkDB
All DBs
Position
17:complement(11266268..11454214)
Genome browser
AA seq
1554 aa
AA seq
DB search
MLGATRPVALLAAAAGLLCLALAGNGAWAACPALCTCTGTTVDCQNLGFRAVPKGIPRNA
ERIDLNGNNITRISKADFGGLRQLRVLQLMENHIVAIERGAFQDLKELERLRLNRNRLPL
LPELLFLGTPKLARLDLSENLIQAIPRKAFRGVTDIKNLQLDNNRISCIEDGAFRALRDL
EVFTLNNNNITSLSVASFNHMPKLRTFRLHSNSLQCDCHLAWLSDWLRQRPRIGLFTQCA
SPANLRGLNVAEVQRKEFVCSDDDEGHSDVSRTQTCSVASSSCPLPCTCANNIVDCRGKG
LTAVPANLPEAITEIRLEQNGIKSVPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRTL
NSLVLYGNKITELPKGLFDGLYSLQLLLLNANKINCVRADAFQDLQNLNLLSLYDNKIQT
MAKGTFSPLRSIQTLHLAQNPFICDCHLKWLADYLHANPIETSGARCASPRRLANKRIGQ
IKSKKFRCSAKEQYSLPGAEDHRSKLGGECFVDSLCPERCRCEGTIVDCSSQRLSRIPEH
LPQYTTELRLNNNDITVLEATGIFKKLTQLRKINLSNNKIAEVEEGAFEGAGSVGELLLT
GNQLESVHGAMFRGLEGLKTLMLRSNKLTCVGNGTFAGLGSVRLLSLYDNQIGSITPGAF
ATVHSLSTLNLLANPFNCNCHLAWLGEWLRKRRIVTGNPRCQKPSFLREIPVQDVAAQDF
SCDDGNDENACTPPPRCPAECTCLDTVVRCSNKGLKGLPKGLPRDVTELYLDGNQLTMVP
PELSNYKHLSFIDLSNNHISTIANFTFSNITQLSTLILSYNRLRCLPLRAFAGLKTLRLL
SLHGNDVSMIPHGVFSDLTSLSHLALGSNPLHCDCAMRWLSDWVKVDYKEPGIARCSGPG
DMAEKLLLTTPSKKFECVGPPDVSIQAKCNPCLSQPCLNHGVCSSDPVDFYRCTCSYGFK
GQDCGTPINACVSSPCQNAGTCHVREDGDDSGFQCECPKGFDGKVCQVNIDDCEDNDCEN
NATCVDGINNYTCLCPHEYTGELCEEKINLCSEELNPCRHNSKCILTSDGPRCECAAGFV
GEDCAVDYDDCQEHKCQNGARCVDAVDGYSCVCPDGFSGPLCEVPPPMVYLQTSACQYHD
CQNGGQCVEAGGEPECQCLQGFVGPRCDKLTSVNFVQRDSYLQLPPLKGQPKANITLQVA
TDEDNGMLLYNGVSERIAVEIYRGRVRLSYDTGSYPNPTIYSLETINDGEFHTVEIVTLE
QMVNLSIDGGSPKTMIKLGKPASLTLESPLYIGGMPTDVNSAALKQMHDRNGMGFHGCIR
DLYINDELQDLRAPGRPPAGILPGCAPCRQQGACAHGACRAAGPSGHTCECEAGWTGAQC
DQRSGDPCQANKCVHGACVALDAFSYSCRCADGFVGTLCDEEQRELFNPCRGVRCKHGTC
RISGAGKPFCECSPGYTGDNCDREVSCRGERVLGRLQKQRGYAACQSVQEVSRVDCKGSC
EGTGGGGGGGGGGGQCCAALRTKRRRYAFECTDGSSFFEEVEKVVKCGCGRCHP
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgctcggagcgacgcgccccgtggctcttctcgccgccgccgccggcctcctgtgcctc
gccttggccgggaacggcgcctgggccgcgtgcccggcgctctgcacctgcacgggcacc
accgtggactgccagaacctgggattccgcgccgtgccaaaaggcatccctcgcaacgcc
gagagaatcgacctcaatgggaataacatcacgcgcatcagcaaggcggacttcggaggg
ctgcgccaactacgcgttctgcaactgatggaaaatcacatcgtcgcgattgaacgcggc
gccttccaggacctgaaggagctcgagcgactgcgcttgaacaggaaccgcctccctctc
ctccccgagctgctcttcctggggacgccgaaactcgcccgactggacctcagcgaaaac
ctgatccaggccatccccaggaaggcgttccgtggcgtgacggacatcaaaaatctgcaa
cttgacaacaatcgcatctcgtgcatcgaggatggggccttccgtgctctgcgtgacctg
gaagtcttcacgcttaataacaataacattacttcattgtcggtggcgagcttcaaccac
atgcccaagctaaggacattccgactgcactcgaacagcctccagtgcgactgccacctg
gcctggctgtccgactggctcaggcaacgcccgaggatcggcctcttcactcagtgcgcc
agccccgccaacctgcgtggcctcaacgtggcggaggttcagcgcaaggagtttgtgtgc
tcagacgatgacgaaggtcactcggacgtgtccaggacgcagacgtgcagcgtggcctcc
agctcgtgccccctgccctgcacgtgcgccaacaacatcgtggactgccgcgggaagggc
ctcacggccgtgcctgccaacctgcctgaggccatcaccgagatacgactggaacaaaac
ggcattaagtccgttccccccggtgctttctcatcgtacaagaagctccgtcgaattgat
ctgagcaacaatcagatttccgagattgctccggatgcgttccagggcctgcggaccctc
aactcgctggttttgtacgggaataaaatcaccgagctgcccaaagggctctttgatggc
ctctattcgctccagctactgctgctcaacgccaacaaaataaactgcgtccgagcggac
gcgttccaggacctgcagaacctcaacctgctctcgctctacgacaacaagatccagacg
atggccaagggcaccttcagccccctgcgctccatccagacgctgcacctggcgcagaac
ccgttcatctgcgactgccacctcaagtggctggccgactacctccacgccaacccgatc
gagacgagcggagcccgctgcgccagcccgcgccgactcgccaacaagcgcatcggccag
atcaagagcaagaagttccgctgctcggccaaggagcagtactctctaccaggagccgaa
gaccaccgctcgaagctgggtggcgagtgcttcgtcgactcgctgtgccccgagcgctgc
cgctgcgagggtaccatcgtcgactgctccagccagcgcctctcccgcatcccggagcac
ctgccgcagtacaccaccgagctgcgactgaacaacaatgacatcacggtgttggaagca
acggggattttcaagaagctcacacagttgcggaaaattaacctgagcaacaacaagatc
gccgaagtggaggagggggcgtttgaaggcgccggctcggtgggagagctcctgctgacg
ggaaaccagctggagagtgtgcacggagccatgtttcggggcctggagggcctcaaaaca
ctgatgctgcgcagcaacaagctgacgtgcgtgggcaacggcaccttcgcaggcctcggc
tcggtgcggctgctgtcgctctacgacaaccagatcggcagcatcactcccggagccttc
gctaccgtgcactcgctctccacgctgaatctgctggcgaaccccttcaactgtaactgc
cacctggcgtggctgggcgagtggctgcgcaagcggaggatcgtgacggggaacccgcgg
tgccagaagccgtcgttcctgcgtgagatccctgtccaggacgtggccgcgcaggacttc
tcgtgcgacgacggcaacgatgagaacgcctgcacgccgccgccacgctgccctgccgag
tgcacgtgcctggacacggtggtgcgctgcagcaacaagggcctcaaggggctgcccaag
ggcctaccccgagacgtcaccgagctctacctggacggaaaccagttaaccatggttccc
ccagagctgtccaactacaagcacctttcgttcattgacctgagcaacaaccacatcagc
accatcgcaaacttcaccttcagcaacatcacccagctctccacactgattctgagctac
aatcgtctaaggtgtcttcctctgcgggcgttcgctggcctcaagaccctgcgcctcctg
tcacttcacggaaacgacgtctccatgattccccacggcgttttcagcgacctgacgtct
ctctcccatctagcgctgggatcaaacccgctgcactgcgactgcgccatgcgctggctc
tccgactgggtcaaggtggactacaaggagccgggcatcgcgcgctgctcggggcctggg
gacatggccgagaagctgctgctcaccaccccctccaagaagttcgagtgtgtcggtccg
cctgacgtcagcatccaggccaagtgcaacccgtgcctgtcgcagccatgcctcaaccac
ggcgtgtgcagcagcgaccccgtcgacttctaccgctgcacctgctcctacgggttcaag
ggtcaggactgcggaacgccgatcaacgcctgcgtgagctcgccgtgccagaacgcgggc
acgtgccacgtgcgcgaggacggtgacgactccggattccagtgcgagtgccccaagggc
ttcgatggaaaagtttgccaggtgaatatcgacgactgcgaggacaacgactgtgagaac
aacgccacctgcgtggacggcatcaacaactacacctgcctgtgtccgcacgagtacaca
ggggaattgtgcgaggagaagataaacctgtgctccgaggagctgaacccatgccgccac
aactccaagtgcatcctcacttccgacgggcccaggtgcgagtgcgccgccgggttcgtg
ggcgaggactgcgccgtcgactacgacgactgccaggagcacaagtgccagaacggcgcg
cgctgcgtggacgcggtcgacggctactcctgcgtgtgcccggacgggttcagcgggccg
ctgtgcgaggttccacctcccatggtgtacctgcagacgagcgcgtgccagtaccacgac
tgccagaacggtgggcagtgcgtggaggcgggcggcgagcccgagtgccagtgcctgcag
ggctttgtggggccgcgctgcgacaagttgacgagcgtcaacttcgtgcagcgcgactcg
tacctccagctgccgcccctcaaggggcagcccaaggccaacattaccctgcaggtggcg
acggacgaggataatgggatgcttctgtacaatggcgtgagcgagcgcatcgccgtggag
atctaccgcggccgcgtgcgcctcagctacgacacgggcagctaccccaaccccaccatc
tacagcctggagacgataaacgacggggagttccacaccgtggagatcgtcacgctggaa
cagatggtgaacctgtccatcgacggaggctcccccaaaaccatgatcaaactgggcaag
ccagcctccctcaccctggagtcgcccctgtacatcggtggcatgcccacggacgtgaac
agcgcggcgctcaagcagatgcacgaccgcaacggcatgggcttccacggctgcatccgc
gacctctacatcaacgacgagctgcaggacctgcgcgccccaggccgcccgcccgccggc
atcctgcccggctgcgccccgtgccgccagcagggcgcgtgcgcccacggcgcctgccgc
gccgccggcccctcggggcacacgtgcgagtgcgaggccgggtggacgggcgcccagtgc
gaccagcgctccggcgacccctgccaggccaacaagtgcgtgcacggtgcgtgcgtcgcg
ctcgacgcgttctcctacagctgccgctgcgccgacggcttcgtgggcacgctgtgcgac
gaggagcagcgcgagctcttcaatccgtgccgcggcgtacgctgcaagcacggcacgtgt
cgcatctcgggtgccggcaagccgttctgcgagtgcagccccggctacaccggggacaac
tgtgacagggaagtgtcgtgccgcggcgagcgcgtgctgggcaggctgcagaagcagcgt
ggctacgccgcgtgccagagcgtgcaggaggtgtcgcgcgtcgactgcaagggcagctgc
gagggcacgggcggaggcggtggtggtggcggtggcggcggtcagtgctgcgcggcgcta
cgcacgaagcgccgccgctacgccttcgagtgcaccgacggctcctcctttttcgaggag
gtggagaaggtggttaagtgcggctgtgggcgctgccacccataa
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