KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133343682
Entry
133343682         CDS       T09663                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    133343682
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lrj01009]
    133343682
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrj03021]
    133343682
Protein phosphatases and associated proteins [BR:lrj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133343682
Transcription machinery [BR:lrj03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     133343682
    Little elongation complex (LEC)
     133343682
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 133343682
NCBI-ProteinID: XP_061409399
LinkDB
Position
18:complement(1717315..1751377)
AA seq 949 aa
MAAPHRAKQQGNETAVAEDEWTTRHGGGAALLPGAGGALRPVGPGSRRSVLLVKLTDSAL
RALETPPAQRGASSPQPKICLGGDKGYMKIPVPLSESPSGFRTFSIYRSRDGAQGSFDCV
HQHVDRLGVPRLDCVGTVQEKLTICATDDSYQTTRERMAQAEEETRSRGAIVIKPGGPFN
GKRTVRRLPPELMDLAPGRKRSAPLNPANTLRKAPAAGTNSAAAATTAAALRPASPAAAA
AASSGPAEALRRPMRERVVHFLALRPCKKAELVARLERDAGGVGGGGQCDRSQVFAILEQ
VAAPRGQDGRQQLKEAAYAEVRPDWPGYSPEERRAVQALLSRRGTQQHPPPLGLSHNAPQ
PRLSPAAEASRPPNHTAQKRPNASAEEDAEPSLGGQQQQKMSQNGTKKPRVSHLTSRVPP
TPCDRPEPPRREKDEGVAAAAAVAVAAAPPCQPVPDTARRKMKKRREKERERETPAGKEM
PGGAATTQGDAGMKQGDAGTSEDRITQRGRERQMDTGMQMDRGMQRDRGMQRDRETQGHR
DMQRDKEVQRDKDAQIEKEMQMMRAAQRDKELLTKRVTETQRERETSKDVETQRNIETNR
DQETQRETVAQREGRNTEDREAQRESDRERERNRERQRDRDQERQRQRLRDLERDKQRER
DRERARQEEKNKQQERERQEERDKQRERERQAERDKQRERDRERQAERDKQQERERQAER
DKQQERERQAERDKQQERERQAERDKQQERERQEERDKQQERERQEERDKQRERERQEEM
EKRREQENSKAVTEPAEEMEVDSQGVSEEEMQYKKFKMDAREADKPELIPERASSAASNP
DYKLDYVPIVTPEQRERYKADFSSEFSEYRRLHRRIDTVKRRFEQLQHKMHALAPDSREQ
QVIRKQVVQEYSKVKKTNPDYQQEKRRCEYLHSKLAHIKQLITDYDQSS
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggcggcgccgcacagggccaagcagcaagggaacgagacggcggtggccgaggacgag
tggacgacgcggcacggggggggtgccgctctgctgccgggcgcagggggggccctgcgg
cccgtggggcctggctccaggcgctccgtgctgctcgtcaagctcaccgactcggcgctg
cgggccctggagacgccgcccgcacagcggggagcctcatccccacagccaaagatctgt
ctgggaggagacaaggggtacatgaagatccctgtgccgctgtccgaaagccccagcggc
ttccgcaccttctccatctaccgctcgcgggacggggctcagggcagctttgactgtgtg
caccagcacgtggaccggctgggcgtgccgcggctggactgcgtgggcaccgtgcaggag
aagctgacgatctgcgccacggacgactcgtaccagacgacgcgcgagcgcatggcgcag
gccgaggaggagacgcgcagccgcggcgccatcgtcatcaaacccggcggccccttcaac
ggcaagagaaccgttcggaggttgccgcccgagttgatggacctcgccccagggcgcaag
cgatcggcgccactcaacccagctaacaccctgcgcaaggccccggccgccggcactaac
agcgctgccgccgccacaaccgccgctgcgctccgtccggcgtcccctgcggccgccgcc
gccgcctcctcgggccctgcggaggccctgcggcgccccatgcgcgagcgtgtggtgcac
ttcctggcgctgcggccctgcaaaaaagccgagctggtggcacggctagagagggacgct
ggtggcgttggtggtggtgggcagtgtgaccgttcgcaagtgttcgctatcctggagcag
gtggcggcaccaaggggccaggatggccggcagcaactgaaggaggcggcctatgcggag
gtgcggccggactggccgggttactcgccggaggagcgacgcgccgtgcaggccctgctc
tctcggagagggacgcagcagcatccgccccccttaggcctatcccacaatgcaccgcaa
cctcggcttagtcctgccgcggaggccagccgaccacccaaccacacagcccagaaacga
ccaaacgcctccgccgaggaggacgcggagccgtcgttgggggggcagcagcagcagaaa
atgtcgcagaacggcaccaagaagccgcgcgtgtcccatctgacgagccgcgttcctccc
accccctgcgatcgcccggaaccgccgcggcgggagaaggacgagggagtggcggcggcg
gcggcggtggcggtggcggcggcgccaccgtgccagcccgtgcccgacactgcgcggagg
aagatgaagaagcgcagggagaaggagcgggagagggagacgccagcgggcaaggagatg
ccggggggcgcggcgacgacgcagggagacgcggggatgaagcagggagacgcggggaca
tcggaggataggatcacgcagaggggcagagagaggcagatggacacagggatgcagatg
gacaggggcatgcagagggacagggggatgcagagagacagagagacacagggacacagg
gatatgcagagggacaaagaggtgcaaagggacaaggatgcgcagatcgaaaaagaaatg
cagatgatgagggcggcgcagagagacaaggagctgctgacaaagagggtcacggagacc
cagagagagagggagacaagtaaagacgtggaaacacagagaaacatagagacaaatcga
gaccaggagacacagagggaaaccgtggcacagagggaagggagaaacacagaagataga
gaggcacagagggagagtgaccgggagagagaacggaacagggagagacagagagatagg
gatcaagagaggcagcggcagagactccgcgacttggagagagacaaacagagggagagg
gaccgggagagggcgaggcaggaggagaaaaacaaacagcaagagagggagaggcaggag
gagagagacaagcagcgagagagggagaggcaggcggagagagacaagcagagagagagg
gatagggagaggcaggcggagagagacaagcagcaggagagggagaggcaggcggagaga
gacaagcagcaagagagggagaggcaggcggagagagacaagcagcaagagagggagagg
caggcggagagagacaagcagcaagagagggagaggcaggaggagagagacaagcagcaa
gagcgggagaggcaggaggagagagacaaacagagagagcgagagaggcaggaggagatg
gaaaagaggagggagcaagaaaactcaaaagccgtgacggagcctgcagaggagatggaa
gtggattcgcaaggagtgtctgaggaagagatgcagtacaagaagttcaaaatggacgcc
agagaagcagacaaaccggagctgataccagaacgtgcctctagcgcggcgagcaacccg
gactacaaactggattacgtgccgatcgtgacgccggagcagagggagcgctacaaggcc
gacttcagcagcgagttctccgagtaccggcggctgcaccggcgcatcgacaccgtgaag
cggcgcttcgagcagctgcagcacaagatgcacgccctcgccccggactcgagggagcag
caggtcatccggaagcaggtggtgcaggagtacagcaaagtgaagaagaccaaccccgat
taccagcaagagaagcgacgctgcgagtacctgcactccaagctggcgcacatcaagcaa
ctcatcacggactacgaccagtcctcgtag

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