Lethenteron reissneri (Far Eastern brook lamprey): 133343793
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Entry
133343793 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133343793
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133343793
09142 Cell motility
04820 Cytoskeleton in muscle cells
133343793
04810 Regulation of actin cytoskeleton
133343793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133343793
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin alpha subunits
133343793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_alpha
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
133343793
NCBI-ProteinID:
XP_061409609
LinkDB
All DBs
Position
18:complement(7434358..7490594)
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AA seq
1199 aa
AA seq
DB search
MGFRTEGLVCLLTLTQGVCWAFNIGTKNAQFYDGPEDAQFGYTVRQYAERSSNWLLVGAP
SLLSSGPRTGDLYKCPVPSRNGNCEKLQFSDSITIPDVSEVRENMSLGLSLAVHPRTKNI
MSCAPLWAHECGSLYFPVGACAVAGSNFRQLGRPFAPTMTGCRSFLDIVFVLDGSNSIWP
WPSVLDFLSSILETFPIGPGQTQVGIMQYGETVSNEMSLNKFTNKAQLKIAASKIPQRGG
QVTNTAMGIETARATAFLPENGGRAEASKVMIVVTDGESSDAYKLPGVIEACNNDGITRF
GIAVLDYYLSSNIPVEKLQAEIRSIASTPTEKYYFDVKSTGALVDITKALGERIYSLEGT
SDISTFEMEMSEAGFSILPVKDGWLLGAVGAFDWLGTVLHVPDAGGAGSVLLPPAALAAE
FPPSLKNHNTYLGYSLSSASLQGKTLYIAGAPRYNHTGKVVTFGRDDTSTDYAIRQALVG
EQIGSYFGGEVCAMDVDGDSVSDVLLVAAPMFMDSSRKETGRVYLYTFSPQGVLEWSAHL
SPAESQDSRFGSALAAVPDLNQDGWGELAVGAPLEDERQGAVYLFQGYGRSLRTTHVQRV
AASALGPNRLQYFGRALHGMLDMDRSGIPDLAVGANGKAVLLWSRAIARVSVTVKFNPNK
INMMDKTCKGMGQDAVCVMAQMCLSANVRPAQMAGSPLELVYNMTLDPVRSVSRAHFVGG
VERTLQGTATVRPDTSSPFCRDYTFYVMELADIVKPLELRVDLALRDPEQGPVLDAEELS
SKIFELPFTKDCGTDERCETDLVLTLEHDIKGTRESPYVVRSERKKHVVSITLENRGENA
YNTRLNFTYSPNQELRNIDTEDGDVSVDCTVPKDHPHSQLCKIGFPVFRESAKMMIRFIF
EFSRKNIMSTASFSAEVKSDSEETAQQLENNSARISVPLYYEADIILFRDSNLAQLEVND
KAQRLDIIKGLDDIGPELKYTFKVQKFGFPLPEEIKLKISLPMFTAQNNRLLYVTNVRSS
PPEMITCDTAGIVDPLNIAKHQYEVQQTTEDLSNVEELTCPDVQCSVFTCTLGRLDEGXD
ASVTVTSRFWNTTFATAKFKSVKLVSRGRLELGPSSFLLIPKGSEERTVELEVTRLENGE
VPVGIIIGSIIGGLLLLALLIFGLWKLGFFRRRYKQLLQDAGPDGGETNPLSDMNTVEE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgggattccgcacggagggcctcgtctgccttctcacgctgacgcaaggtgtgtgctgg
gcatttaatattggaaccaaaaatgcccagttctatgacggccctgaagatgcccagttt
ggctacactgtgcggcagtatgcggagagatccagcaattggctgttggttggggcgccc
agcttgttgtcatctggtccacgaaccggggacttgtacaagtgtcctgtcccctcacgt
aatgggaactgtgagaagctgcagttcagtgattccatcaccatcccggatgtgtcggag
gtgagggagaacatgtctctggggctgagcctggccgtccaccccaggaccaagaatatc
atgtcctgcgctccgctctgggctcacgagtgtggaagtctgtatttccccgtgggtgcc
tgtgctgtggctggatctaacttccggcagcttggaaggccatttgcgccgactatgaca
ggctgccgttctttcctggacatcgtctttgttctcgatggctccaacagcatctggccc
tggccgtccgtgctggattttctcagctccatcctggagacattccccattgggcctggg
cagacgcaggttggcatcatgcagtacggggaaactgtgagcaatgagatgagcctcaac
aagttcaccaacaaagcgcagctgaagattgcagccagcaaaatccctcagcgcggaggc
caagtcaccaacacggccatgggcattgagacagcacgggcgaccgcatttttgccggaa
aacggcggaagagccgaggcgtccaaggtgatgattgtggtgacagacggggagtcatct
gatgcctacaaactgccaggggtgatcgaggcttgcaacaatgacgggatcactcgcttc
ggcattgcggttctggactactacctaagttccaacattcctgtggaaaaactccaagcg
gagatccgctcaatcgccagcacgcccacagagaaatactacttcgacgtcaagagcaca
ggagcactcgtggacatcaccaaggcccttggggaacgcatctatagcctggagggaacc
agcgacatctcaacgttcgagatggagatgtcagaggctggattctccatactccccgtg
aaggacggctggctgctgggggcggtgggcgctttcgattggctgggcaccgtgctgcac
gtgcccgacgcgggcggcgccggctccgtgctgctgcccccagccgcgctggccgccgag
ttcccgccgtctctcaagaaccacaacacctacctcgggtactcgctctcatccgcaagc
ctgcaggggaaaaccctgtacatcgcgggagcacctcgctacaaccacacgggcaaggtg
gtcacgttcggcagggacgacacctccacggattacgctattcgccaggccctggtcggg
gaacagatcggttcgtactttggcggggaggtgtgcgccatggacgtggacggggactcg
gtgtcggacgtgctgctcgtggccgcccccatgttcatggactcgtcccgcaaagagacg
ggccgcgtctacctctacacgttcagcccccagggtgtgctggagtggagcgctcacctc
tcgccggccgagagccaggactcgcgcttcggctcggctctggccgccgtccccgacctc
aaccaggacggctggggcgagctggcggtgggggctccgctggaggacgagcgccagggc
gctgtctacctgttccagggctacggccgctccctacgcaccacccacgtgcagcgcgtc
gcggcatccgcactcggcccgaatcgcctccagtactttggccgcgcgctccacggcatg
ctggacatggaccggagcggcatccccgacctcgccgtcggggccaacggcaaggccgtg
ctgctgtggtcccgagcgatcgcacgggtctcggtgacggtcaaattcaacccgaacaag
atcaacatgatggacaagacatgcaaggggatggggcaggacgctgtttgcgtgatggca
cagatgtgcctcagtgccaacgtgcggcctgctcaaatggccggctctccgcttgagctg
gtgtacaacatgactctggaccccgtgcggtcggtgtcgcgcgctcactttgtcggcggg
gtggagcgcaccctgcagggcactgcgaccgtccggccagatacctcctccccgttctgc
agggactacactttctacgtgatggagctcgccgacatcgtgaagccgctggagctgcgc
gtggaccttgccctgagagaccccgagcaggggcccgtgctggatgcggaggagctcagc
agcaagatcttcgagctgccgttcaccaaggactgcggcaccgacgagcgctgcgagacg
gatctggtgctcacgctggagcacgatatcaagggcacacgggagtctccgtacgtggtg
aggtcggagaggaagaagcacgtggtgtctatcacactggagaaccgcggagagaatgcc
tacaacacccggctcaacttcacctactcgccaaaccaggaactccgcaacatcgacacg
gaggacggggatgtgagcgtcgactgcacagtgcccaaggaccatccacactcacagctc
tgcaagatcggattcccggtgttcagagagagtgccaagatgatgatacggtttatattt
gagttcagccgcaaaaatatcatgagcaccgcttcgttctccgcggaagtgaaaagtgat
agcgaggagacggcccagcagctggagaacaactccgcacgcatctctgtccccctttat
tacgaagccgacatcatcttgttcagggactcgaaccttgcacagctggaggtgaatgac
aaagcacaacgactggacatcattaaggggttggatgacatcggtcctgaattgaaatac
acttttaaggtccagaaatttggattccctcttccggaggaaattaaactcaagatctcc
ctgccgatgttcaccgcgcagaataaccgcctgctctacgtgaccaacgttcgctcttcc
ccgccggagatgataacgtgtgacaccgctggcatcgttgatcccctgaacatcgccaag
catcagtacgaggtgcagcaaaccacggaggacctgtctaacgtggaggaactgacatgc
ccagatgtccagtgctctgtgttcacgtgcacgctcggccggctggacgaaggcnaagat
gcgtcggtcaccgtcacgtcccggttctggaacaccaccttcgccacggccaagtttaaa
tctgtgaagttggtgtcccgcgggaggctggagttgggcccttcctcattcttattaatt
ccaaagggcagcgaagagaggacggtggagctggaggtcacgaggctggaaaacggtgaa
gttccggtcggaatcatcattgggagcatcattggtggtctcctgctgctggctctgctc
atctttggcctctggaagctgggatttttccgaaggcgctacaagcagctgctgcaggat
gcaggcccagatggtggcgagaccaacccgctgtcagatatgaacaccgtcgaagagtag
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