Lethenteron reissneri (Far Eastern brook lamprey): 133343837
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Entry
133343837 CDS
T09663
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
133343837
Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
133343837
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
Ig_2
I-set
TSP1_CFP_C
CarboxypepD_reg
TSP1_spondin
ig
TSP1_ADAMTS
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
133343837
NCBI-ProteinID:
XP_061409721
LinkDB
All DBs
Position
18:8972399..8987800
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AA seq
1271 aa
AA seq
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MGVVGALLLSCACLLATVLGSRMSGLKASQNQAMLVQSKNYPNMLGNHGYSEWTSWFNID
HPGGSGDHERLEAIRFYYRARVCSSPLAIEARTTAWVPAASTGERVHMSPHEGFWCLNHE
QPGQANCSNYHVRFRCPIVDKKWSDWGSWSSCSTTCGRAGYQTRNRLCISTGAIVPQRTQ
CEGKGVQGRLCSKPCPAVHGNWTTWTKWSVCGVTCGNGQQLRQRWCSNPTPKYGGLDCTG
AVLQSRLCAKPTCPETVTRRMVSAYKPPAPLPTPANKPACSLSCTVGHVNAACDACVCDG
HLLDGAVFGAARTPLAGARVTLLEGPSQRWLAVSDAHGSFRVPDLCPSRGARLAIEHEKH
VPTTAPILWAKGPLTVFSVQLKRAEKPHVTKHPEGRMRYEGQGVSLCCKAEGTPTPEKYS
WYHNDTLLDQEVYKHGNLVLKNLKPSQAGEYYCKATNIAGSMKSSPATLYVVEKGNAPCD
PKPETNLIRLPHDCFQNHTNSFFIDVGNCPKKVCVKELDFDLRCKDSVSHCCGITRMEKR
DIQCNGYTLPTMVAAECGCKKCTQTKMIVRGRAVADDNGEPMRFGQMFIGNIAIGFTGYK
GDFNLQVPPGTERLVVTFVDRFGKFVNSTKVLLFNHKGGTVFHNIKLQRKKPAIPIASTV
TNTISLGEMEGEDPIGQIEIPPNSFYKLNGELYNGTVQASVTFLDPRNITTMSSASSDLN
FVSDNGDMFPLRTYGMFSVDFMAENLQEPLNVGQVKVFLDSAQVKMPQHLKSMKLWSLNP
ETGMWDEESNFLYEKSKRRKREERTFLIGNVEIRERRLFNLDVPENRRCYVKVRAYRSDR
FFQSEQLEGVVVSLINMEPQEGFSANPRAWGRFDSVITGKNGACLPAFCDELVPDAYTAY
VTANIGGEELEAAPSSPKLNPNVIGTAQPYLGKLEYRRTDHDDERFKKTAFKINLAKPNA
NSPAETDGPIYPFKNIKQCEDAPYNANHFRFYRVEDDKYEFNTVAFNENDLTTWNEDYLS
WWPKPMEFRACFIKLKIKSSASVMIRSRNLGGTHVETIDKLYGIRDIRSVHTNLKENVSS
ACMEFKCSGMLFDENLIDRTLVDISTQGDCRRENINGMLQEYLINHPPHIVNNETHGFKM
YAPLDPLGHNYGIYTVSDQDPKTAKEIALGRCYEGSSDSTSRVMKPDVGVAVTFACRESN
VTRQSLFQRLQTSPAETLAEMGREMRGGLPGRTRLVSSRGQVRGGRRQQPQQARARLVST
RRFLQRNRSAQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggtcggggcgctgctgctgtcctgcgcatgcctcttggccaccgtactagga
tctcggatgagtggtctcaaggcttctcagaaccaggccatgttagtgcagagcaagaac
tatccgaacatgctggggaaccatggctacagcgagtggacctcgtggtttaacattgac
cacccgggtgggagcggcgatcacgagcggctggaggcaatccggttctactaccgtgcg
cgcgtctgctcatctccactggctatcgaggcgcgcaccactgcgtgggtgccagctgcc
agcacgggcgagagggtgcacatgagtccccatgagggcttctggtgtctcaaccacgag
cagcccggccaagcgaattgctccaattaccacgtgcgcttccgctgcccaatcgtggac
aagaagtggtccgactggggctcctggagctcgtgcagtacgacctgcggtcgggccggc
taccagacgcgcaaccggctctgcatctctacgggagccatcgttccacagaggacgcag
tgcgagggcaagggggtgcagggtcgcctgtgctccaagccgtgcccagccgttcacgga
aattggacaacctggaccaagtggtcggtgtgcggcgtgacgtgcgggaatggacaacag
ctgcgtcaacgatggtgctccaaccccacacccaagtacggggggctggactgcacgggg
gccgtcctgcaaagccgcttgtgtgccaaacctacctgtccagaaacggtcacaaggaga
atggtgtctgcttacaagccaccagcacccctgccaactccagcgaataagccggcgtgc
agtctgtcctgcaccgtggggcacgtgaacgcggcgtgcgacgcgtgcgtgtgcgacggt
cacctcctggacggcgccgtgtttggcgcagcccgcaccccgctcgccggtgctcgggtc
acgctgctggaggggccctctcagaggtggctcgccgtgtcggatgcccacggatctttc
cgcgtgccggatttgtgcccgagccgaggggcacgcctcgcaatcgagcacgaaaagcac
gtgccgacgacggcgccgatcctctgggccaaggggccgttgaccgtcttcagcgtgcag
ctgaaacgcgcggaaaaaccacacgtcaccaaacacccagagggcagaatgcgctacgaa
ggacaaggagtgagtttgtgctgtaaagcggagggaacgccaactccagaaaaatactcg
tggtatcacaatgacactctgctagaccaggaggtgtataaacatggcaacctcgtgctg
aaaaatctaaagccgtcgcaagcaggagaatactactgcaaggcaacaaacattgctggc
tccatgaaatcttcaccagctaccctatatgtcgtggaaaaaggtaatgccccatgtgac
ccaaagcctgagacaaacttgataaggcttccacacgactgcttccagaaccacacgaac
tcgtttttcatcgacgtggggaattgtcccaagaaggtgtgcgtcaaggaactcgacttc
gacctgcgctgcaaggacagtgtcagccactgctgcggcatcaccaggatggagaagcgg
gacatccagtgcaatggctacacgctgcccaccatggtggcggccgagtgcggctgtaag
aagtgcacgcagaccaagatgattgtgcgcgggagggccgtggctgacgacaacggggag
ccgatgaggttcggccagatgttcatcggcaacattgccatcgggttcaccggctacaaa
ggcgacttcaacctgcaggtgcctccgggcacggagaggctcgtggtgacctttgtggac
aggtttgggaagtttgtgaacagcaccaaggtcctgctcttcaaccacaagggaggaacg
gtcttccacaacatcaagttgcagagaaagaagcccgccattcccatcgcttccactgtc
accaacacgattagcctgggtgagatggagggggaggatccaattgggcaaatagaaatt
ccgcccaactcattctacaagttgaatggggagctgtacaacggcactgtgcaggccagc
gtcactttcctggatccgcgaaacatcacgacaatgtcgtctgcctctagtgacttgaac
tttgtaagtgacaatggcgatatgtttcccttgcgtacgtatggcatgttttctgttgac
tttatggcggaaaatttgcaggagcctctgaacgtcggacaggttaaggttttcctcgac
tcggcacaggttaaaatgccacagcatctgaaatcaatgaaactgtggtctttaaatcca
gagaccggaatgtgggatgaagaaagcaacttcctgtatgaaaaatccaaaaggcgaaag
agggaagagcgtacatttctcataggaaacgtggaaattagagaacgccggttgtttaac
ctcgatgtaccggaaaatcgcaggtgttatgttaaggtgcgtgcttacagaagtgacaga
ttctttcagagtgagcagcttgagggtgtagtggtcagcctgattaatatggagccgcag
gaagggttttccgcaaacccacgcgcgtggggaagatttgacagtgtcatcacaggtaaa
aacggtgcttgtttgccagccttttgtgatgagctggtcccagatgcttacactgcctac
gtgacagccaacattgggggagaagaactggaggcagctccgtccagccccaaacttaat
cccaatgttattggcacggctcagccatacctaggaaagcttgagtaccgacgtactgac
cacgatgacgaaaggttcaagaagactgctttcaagattaatttagcaaaaccaaatgcg
aactccccagcagaaactgatgggccaatctatccttttaaaaacatcaaacagtgtgaa
gatgccccttacaatgctaatcatttcagattttatagggtggaagatgacaagtatgag
tttaataccgttgcattcaacgaaaacgacttgacaacctggaacgaagattacctgtcc
tggtggccaaaaccaatggaatttcgtgcctgcttcatcaaactgaaaatcaagagctcc
gcgtccgtgatgatacgttcccgaaaccttgggggcactcacgtggagacaatcgacaaa
ctctacggcattcgcgacatccgcagcgtccacaccaacctcaaggagaacgtatcttcg
gcatgcatggagttcaagtgcagcggcatgctctttgatgagaatctcattgatcgcacg
ctggtggatatttcgacgcaaggcgactgccgccgggagaacataaacggcatgctccag
gagtatctgatcaaccacccaccgcacatagtcaacaacgagacgcacggcttcaaaatg
tacgcgcctctggatccgttgggacacaactacggcatttacacggtctcggatcaggac
cccaaaaccgccaaagaaatcgccctcggccgatgctacgagggctcgtcggacagcacg
tcccgcgtcatgaagcccgacgtgggagtggcggtgaccttcgcgtgccgcgagagcaac
gtgacgcgacagagcctcttccagcgcctgcagacgtcgccggccgaaaccctcgccgag
atggggcgcgagatgcgcggcggcctccccgggagaacccggttggtgtccagccgaggt
caggtccgcggtggccggaggcagcagccgcagcaggcccgggcccggctcgtgagcacg
cggagattcctgcagaggaatcggtccgctcagtga
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