Lethenteron reissneri (Far Eastern brook lamprey): 133343875
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Entry
133343875 CDS
T09663
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04350
TGF-beta signaling pathway
lrj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133343875 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133343875 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133343875 (NEO1)
Cell adhesion molecules [BR:
lrj04515
]
Immunoglobulin superfamily
DCC/UNC5 family
133343875 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
DUF4998
Motif
Other DBs
NCBI-GeneID:
133343875
NCBI-ProteinID:
XP_061409805
LinkDB
All DBs
Position
18:complement(12134966..12306369)
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AA seq
1519 aa
AA seq
DB search
MGVGGTMAPRSDSPAGTPPPPRTALLALLLLLLLKVAFVHGLNKRTFSPFHFTSEPRDTV
AARGSSIVLNCSVRTSEGTPRIEWKKDGTFINLATDERRALLPGGSLQLQNVLHGKHHKP
DEGTYQCVATVDSLGTIVSRTARLVVAGVPRVTVQPEPMSAHVGDAAVLSCEVGGEPMPG
VRWQKDRANLTLDGRRLALLAGGALLVEHVEAGDAGVYRCVAENIASSRASDEAELEVLA
ESSVPRKPVFLRHASDVTVRAGLSATLDCAVSGHPRPSLRWLKEGHPVRESSGRVTMLPN
GQLRFSEAAVEDSGIYQCVVTGENETLKAHAELSVQTAPVFAKRPRDTLAYEGMDVVLAC
SVTGHPVPTVKWVKNGDIVIPSDYFQIVDDHNLKILGLVRSDEGIYQCIAESEAGNAQSS
AQLLVLERDDIGHSVSPNPSSHPPSVTGAAANDRHRTASGGEAPLPSAPRDVVAALVSTR
FVKLMWRAPADPQGDILGYTVFYAKEKANRERAVNTTKPGDLQVTVVDLHPEAEYSFRVM
ALSRHGLGESSQTIRVATQAEVQVPGPAMNLEAEVTSATSITLSWDMPISGNGPILNYRL
YYMERSPGVDGEQEVDVGGQSYSMHGLKKHTEYGFRVVAVNRHGPGASTEDVVARTYSDV
PSAPPSNVTIEVLNSKTIIVRWLPPPQGTQNGPITGYKIRHKKGFRRGETENTEGNQLWH
QLSGLEKGSEYSFRVAAMNINGTGPSSEWVSAETFEDDLDESRVPDQPSSLHVRPLTTSI
VVSWTPPASHGVMVRGYLIGYGVGSPYAETIRVDTKQRYYAIDNLEPNHQYVISLRAFNQ
MGQGVPLYESATTRAVTDPEDPAEDDLFDLFVDPFTAVPDLPTPMLPPVGVQAFVISHDT
IRVTWADNTLAKNQRIPDARHYTIRWKTYFSTTAKYKTANSTTFTYLVSSLKPSTLYEFS
VMVTKGRRSSTWSMTAQGTTMEAVPSSAPKDLTVISKEGKPRTVIVNWQPPVEANGKITG
YIIYYTTDATAELHDWVVEPVVGDRLSHQVQELTLDTGYYFKIQARNAKGMGPLSDAVSF
RTPKVSTTAAKGAVGEGGSWPGNPFDRASFNDAPTGQIPPPQGARGSALDNNLLIIIVVT
VGGVTVIAVIVLAVVCTRRSAATQKKKRSAHKPNNGSGKRKGNPKDLKPPDLWIHHETVA
LKPMDKSPGPDSALADTPMTHGSHEIEGYGRESEDGMSTMERSIAARHAMRPKIVIPGES
QSQLLATASRHHNPAKNHPSYLSLPRPPPPHHHHHHHHHHHQLSPLPPAPSPPPLTGTPS
PSCSFPGPPAYDVCIVGLPGAGGGRASARDSLQQSPSGEMAPGPVPGLGESDGCPTAGPA
AAAGPAVASVVADDDPPGRHLPTAHVRPSQPLTSFAVPVVPAHPSVDGAAAVGSVGPLHP
QGGPQLLPARTASVGTLGRTRAPLPVTMPSAPDAPVEPSHHPFEDTESTFGQDDEELSAE
MANLEGLMKDLNAITSSGI
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaggaggcaccatggccccaaggagtgacagcccagctggaacgccgccgccg
ccgcgcacagctctgctggccctcctgctgctgctgctgctcaaagtggcctttgtgcac
ggcctgaacaagcggacgttcagccccttccacttcacgtcggagccgcgggacacggtg
gcggcacggggctcgtcgatcgtgctcaactgctcggtgcgcacctcggagggcaccccc
cgcatcgagtggaagaaggacggcaccttcatcaacctggcgacggacgagcggcgcgcc
ctgctgccgggcggctcgctgcagctgcagaacgtgctgcacggcaagcaccacaagccg
gacgagggcacctaccagtgcgtcgccaccgtcgactccctgggcaccatcgtgagccgc
accgcgcggctcgtcgtagccggagttccccgcgtcacggtgcagcccgagccgatgtcg
gcgcacgtgggcgatgccgctgtcctctcctgcgaggtcgggggcgagccgatgcccggc
gtgcggtggcagaaggaccgggcgaacctgacgctcgacgggcgccggctggcgcttctg
gccggcggggcgctgctggtggagcacgtggaggcgggcgacgccggcgtgtaccgctgc
gtggccgaaaacatcgccagctcgcgggccagcgacgaggccgaactcgaggtcctagcc
gagtcgagcgtcccgcggaagcccgtgtttctgcgccacgccagcgacgtgacggtgcgg
gcgggattgagcgccaccctggactgcgccgtcagcggccacccgcgtcccagcttgcgc
tggctcaaggaaggtcaccccgtccgggaaagttccggcagggtgaccatgctgccgaat
ggacagctgaggttttccgaggccgctgtggaagactcggggatttaccagtgtgtggtg
accggtgaaaatgagaccctcaaagctcatgccgagctctccgtacagaccgctccggtg
tttgcgaagcgcccgagggacacgctcgcctacgagggcatggacgtggtgctggcgtgc
agcgtgaccggccaccccgtgcccaccgtcaagtgggtgaagaatggagacattgttatc
ccgagtgactacttccagattgtggacgatcacaacctcaaaatcctggggctggtgaga
tcagacgagggcatttatcagtgcattgccgagagcgaggccggaaatgcccagtcaagt
gcgcagcttctcgtgctggagagagacgacatcggccactccgtgtctcccaacccgtcg
tcccaccccccgtctgtgaccggtgccgccgcgaacgaccgccaccgcacagcgagcggc
ggggaggcccctctgccgtcggcgccccgcgacgtcgtggccgccctggtgtcaacgcgc
ttcgtcaagctcatgtggcgagcgcccgccgatccgcagggagacatcttgggctacacc
gtcttctacgccaaggagaaggccaacagggaacgagcggtgaacaccaccaagccaggg
gacctgcaggtcaccgtcgtcgacctccaccccgaggcggagtattccttccgcgtcatg
gccctcagcaggcacggtctgggagagagctcccagacgatcagggtggccacacaggct
gaagtgcaagtgccggggccggctatgaatctggaagccgaagtcacctctgctacctcc
atcactctgagctgggacatgcccatctcaggaaatggcccgatcctcaactatcgcctt
tactacatggagcggagcccgggcgtggatggggagcaggaggtggacgtgggcggccag
tcgtacagcatgcacggcctcaagaagcacacggagtacggcttccgcgtggtcgccgtc
aaccggcacggcccgggagcctccaccgaggacgtggtggcgcggacctactcggacgtt
cccagcgctccaccttccaacgtgaccatagaagttctcaattcaaagactattatagtg
cgctggcttcctccaccgcaagggacgcagaacgggcccataaccggctacaaaatccgt
cacaagaagggcttccggcgcggagaaacggaaaacacagagggaaaccaactctggcat
cagctttcaggtcttgaaaagggctcggagtacagcttcagggtggcagcaatgaacatt
aatgggacgggtccgtcctctgaatgggtttcggcggagacctttgaagacgacttggat
gaatcgcgcgtgcccgaccagcccagctcgctgcacgttcggccactcaccaccagcatc
gtggtgagctggacgcctccggccagccacggcgtcatggtgcggggttacctcatcggc
tacggtgtaggaagcccctacgcagagaccatccgcgtcgacaccaagcagcgctactac
gccatcgacaacctcgaaccaaatcaccagtacgtcatctctctgcgggcttttaaccaa
atggggcagggcgtgccgctgtacgagagcgcgaccactcgtgccgtcacagaccctgaa
gatcctgcggaggatgacctgtttgaccttttcgtggaccctttcacggcagtcccagat
ctccccactcccatgctgccccccgtgggggttcaggccttcgtcatctcccacgacacc
atcagggtcacgtgggcagacaacactctggccaagaaccagcgcatcccagacgcgcgc
cactacaccatccgttggaagacatacttctccaccacagccaaatacaagacggcgaac
tccacgacattcacgtacctggtgagcagcctcaagcccagcacgctgtacgagttctcc
gtcatggtcaccaagggacgccgctccagcacctggagcatgacggcacagggcaccaca
atggaggcggtgccttcgtccgctccaaaggatctcacggtcatcagcaaagagggaaaa
cctcggaccgtcatcgtgaactggcagcccccggtcgaagccaatggcaaaatcacagga
tatatcatctactatacgacagatgccacagctgagctgcatgactgggtcgtggagcct
gtggtgggggaccgtctgtcccaccaagtgcaggagctcacgctggacacgggatactac
ttcaagatccaggctcgtaacgccaagggcatgggcccgctctccgatgcggtgtcattc
cgcacgcccaaggtttccaccactgctgcaaaaggggcagttggagagggaggctcctgg
cctggcaacccctttgacagggccagtttcaatgacgccccgacgggacagatcccgcct
ccgcagggcgcccgcggctccgcgctggacaacaacctcctcatcatcatcgtcgtgacg
gtgggcggggtgaccgtcatcgccgtcatcgtgctggccgtcgtgtgcacgcgtcgctct
gccgccacacagaagaagaaaaggtcggcgcacaagcccaacaatggctcgggcaaacgc
aaaggcaaccccaaagacctgaagcctccggacctgtggatccaccatgagacggtggct
ctcaagccaatggacaagtcgccgggacccgacagtgccttggcggacacgccgatgacg
cacggctcccacgagatcgagggctacggccgagaatccgaagacgggatgtcgactatg
gaacgctctatagcggcgcgccacgccatgcgaccgaagatcgtgattcctggagagtct
cagtcacaactgttggcaacagcctcccgccaccataacccggcaaagaatcacccgtcc
tacctctccctcccccggccgccaccaccgcaccaccaccaccaccatcaccaccaccac
caccagctctccccgctgccccctgcgccctctccgccccccttaaccggcaccccctcg
ccctcctgtagcttcccaggccccccggcatacgacgtgtgcattgtgggtctcccgggg
gcaggtggcggcagggcttctgccagggactcactgcagcagtcgccaagcggagaaatg
gccccaggtcccgtgccgggcctgggcgagagcgacggttgtccgacggccggaccggcg
gctgccgccggtccggccgtcgcgtcggtggtggcggacgacgatccgccgggccggcac
cttcccacggcgcacgtgcggccctcccagccgctcaccagcttcgccgtgcctgttgtg
cccgcccacccgtccgtcgatggcgccgctgccgtgggcagcgtgggcccgctgcacccg
caaggtggtcctcagctgcttccagccaggacggcttcggtgggcacattgggacgtacc
cgcgccccgctgcctgtcaccatgcccagcgcccctgacgcccccgtggaacccagccac
catcccttcgaggacacggagagcaccttcgggcaagacgacgaggagctgagtgctgag
atggcaaacctggaagggctgatgaaggacctcaatgctatcacatcctcaggaatctga
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integrated database retrieval system
