Lethenteron reissneri (Far Eastern brook lamprey): 133344078
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Entry
133344078 CDS
T09663
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lrj00535
]
133344078
Proteoglycans [BR:
lrj00535
]
Extracellular matrix (ECM) proteoglycans
Others
133344078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Pur_ac_phosph_N
Collagen
Ig_DSCAM-DSCAML_C
VWA_3
vWA_SIBA-E
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
133344078
NCBI-ProteinID:
XP_061410008
LinkDB
All DBs
Position
19:complement(247857..345229)
Genome browser
AA seq
2530 aa
AA seq
DB search
MRLHVASFVAWACLLSLHLTPPTTAQAVPAPANMQVSVLSESSVKVSWKPARGRFKGYRL
IVLPSSGEGSPQEMTLARDATGAVVRELEAGVEYMVSVAAYGPHGESTPLVKQIVIETTS
ASLAEAPKIQKEKEESSSPTHIRGCPPDVPAELVFVVDGSQGVSRASFQRVKAFVSALVS
AFTLGPDRARVALVQFSGDARLEFALHRYRSKAEIYKALRAVTLKGGSATNTGEALRFTL
ASVLTAASAEGGGARRRVPQLAVLITDGPADDGADVAEHAQELRDAGVELFAIGVAQANK
NELRLVASPPLSTHVFSVRGFEQLESSQGVVIGQMCAGVEAQQARIEEETSQILPPQNLR
TLERTGDSIRLGWDAPGPEVSSYRVFYQPVGDDEGTARREATAPGGATHVQLSRLQPDTE
YQVSIYAVSGQRSSEPLVVTESTTEDHGRGELTPPGDVVLTEASSRSLRVSWSPARSSVR
HYRIEYRSLVPGDDSDEDEEDDEDRERPSLQEAEVDAAVTMLALSDLQPETRYRVHVVAV
YDGGEAVSGAVEETTLDERGSPSGLEVEERLSDSVLVRWLPSPGRVLSYRVRYAPLEGGA
GAAEGTGGERAVSGELVGARLEGLAPGTRYRVTVIAEYATGLSDPLVADVETLGETGGVT
ELRVLETTWGSLRLTWSPAPGPVARYNLRYSAPTAETETAGGEEAGSGLWDVGAGPGLGE
QQAILRPDATGAWIRGLRPETTYAISVMAEYASGEGERASVEGTTLPEMGPVSLLEASDV
AADSATVSWAPAPGHVEAYSIEFRSAAGDEHGARDAVARATSGALDGLTPGTAYQAVVTP
VYADDERGPPASVNFTTEDSAEARALRFSHITPASARVLWSAARGAVTQYRLSFRAASGP
GKAVVLKVPGDATTIPLRRLRQNTNYDVLVYPVYRSGEGQPIKGRFSTVPTVKFRPPRDL
RVTDAWASSLRASWRPAPGPVVAYRVAYAAEDEDAALPREVIVGPHDSTAVIDDLRPDTA
YVLSVHAIFADGESLGLEGKASTGDMEPEPPTMEPEPSGGRFACSAPHADIVLLLDGSWS
IGRHNFRLVRQFLEALVHAFDVGAGRTRVGLVQYSGDPRTEWNLNSYPTKGAVVQAIRGL
PYKGGNTLTGLALSYILQNSFTVKAGARPGIPKIGILVTDGKSQDGVKGPARSLKDAGVE
LFAIGVKEADEAELKEIASEPDEMHVHNVADFAAMSSIVGSLTKTVCARVSEQEREIVAA
ASIADAGPQAPRDLVTSEITTTSFRVSWTRAPGRVLMYRVVFYPTKGGQPDEVVVDGSAN
SAVLQNLLTASEYQVAVFGVYASAASEALRGSESTLDLPPIRDLRIFDVTHSSMRVAWEA
SPGATGYLLLYSANAGGEEGDAKEQKVGAGFTEIELSRLTPSTEYTVTLYAMYGEEASDP
LTGQETTLARGAAAATPKMPTSKMPTGKPSSFHLVKERVDVSSSSAGLAAPSNLHVSEES
YDRFRLSWEVPGDSSVLGFRVVHRPSAGGEEKVLLVGAGVSSVLLQGLRAGTEYSAHVHA
TYSTGESVGLTGLARTRHLGINHLFVYDVRATGFCVEWQPQRDATAYRVVLQEALGGPQQ
DVTLSSSVNAHCYYELLPGTEYRVGVHAQVREAEGPAVNVTQRTRSVVTEAPYTTPIGAP
PTTAPQPREECRSARADLVFLVDGSWSIGDDNFHKVMRFLGSLAGALENIGPHGTQVAMA
QFSDDARTEFNLNVHRSRESLLDGIRNVRYKGGNTKTGRAMKHARTEMFVSESGMRRGVP
KLLVVITDGRSQDEVTRIAKDVQHEGYSVFSIGIADADVAELTNIASRPSERHRFFVDSF
DDFRKIENELIGFMCEAASATCPPVYLNGYSVAGFKMMEAFGLVDKLYSSLSGVSMEPGS
FNAFPAFRLHKDAMLSQATRELHPEGLPQEYTVSFMLRILPDTSTEPFSVWQVLDKDSSS
QAGVQLDVGGRTLTYFTVDEEGKPQFISFDGPDVQRIFFGSFHKVHVTVAKQSVRLFVDC
TLIAEKQSRVPGNVSLDGSEVLGRLARSTPSAPKSATFQLQMFEIVCGTTWPAKDKCCEL
PALRDEATCPTLPLACSCAQDSKGPPGPPGPPGGTGPKGPRGENGGIGPQGAMGPRGEQG
PPGSQGQPGPQGPNGISMEGEPGRPGEKGDQGPAGHAGPMGPSGPPGQQGREGLQGPRGP
PGKEGGPGLPGQAGPMGTSGNPGPPGPSGKPGFNGEGGLQGPAGTKGEKGERGDAQGQNV
VRMLARQVCEQMINSHISRFNSIINQIPSNNHHHVRALPGPKGEAGRPGPPGPPGEPGPL
GRPGFPGSPGMPGRGGERGLAGEKGERGSTGIGSSGLPGPQGSPGSPGEGRQGSPGPEGM
RGPPGPPGSFGSPGLRGSPGPNGYCDASMCGGYNIGGDHNSEGGGRGGRQQPAAPPPRRG
DSPGEEGGDEGGEEDAEEEEGRYGDYAGPYGHHEGAYGDAADGAAGLDEEEQVPSPGMTR
WMARFRRSPR
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgagactacacgtggcgagtttcgtggcctgggcctgtctcctctccctccacctcaca
ccgcccaccaccgctcaagcggtgccggcgccggccaacatgcaagtcagcgtgctgtcc
gagagcagcgtcaaggtgtcgtggaaaccagcgcgtgggcggttcaaggggtaccgcctc
attgtgctgcccagctcgggcgagggctccccacaggagatgacgctggcacgcgacgcc
acgggggcggtggtgcgcgaactggaggccggcgttgagtacatggtcagcgtggccgcg
tatggtcctcacggggagagcacgccgctcgtcaagcagatcgtcattgaaacaacatca
gcctctctggcagaggcgccgaaaattcagaaggaaaaagaagagagcagcagccccacg
cacatcagaggctgcccgccggacgtgcccgcggagctagtgttcgtggtggacggctcg
cagggtgtgagccgcgccagcttccagcgcgtcaaggcgttcgtgtcggcactcgtctct
gccttcaccttggggccggaccgtgcgcgcgtcgcccttgtgcaattctcgggcgacgcg
cgcctcgagtttgcgctgcaccgctaccgcagcaaggcggagatctacaaggccctgcgc
gccgtcacactcaagggtggcagcgctaccaacacgggcgaggcgctgcgcttcaccctg
gcctcggtgctcacggcggcatcggcggagggcggcggtgcgcggcgccgcgtgccgcag
ctcgccgtgctcatcaccgatggcccggccgacgacggcgccgacgtcgccgagcacgca
caggagctgcgcgacgccggcgtcgagcttttcgccatcggcgtggcccaagcgaacaag
aacgagctgcgtctggtggcgtcgccgccgctctccacgcacgtcttctccgtgcggggg
ttcgagcagctcgagtcgtctcagggcgtcgtcatcggccagatgtgtgccggcgtggag
gcgcagcaagcgcgcatcgaggaagagaccagccaaatcctacctccccagaacctgcgc
acgctggaacggacgggcgactcgatccgcctgggctgggacgcgccgggccccgaggtg
tcgagctaccgtgtgttctaccagcctgtgggcgacgacgagggcaccgcgcggcgcgag
gcgacagcgcccgggggcgccacgcacgtgcagctgtcgcgcctgcagcccgacaccgag
taccaggtcagcatctatgccgtgtcgggccagcgctccagcgagccgctcgtcgtcacc
gagagcaccaccgaggaccacggacgaggggagctgaccccgccaggcgacgtggtgctg
acggaggcgtcatcacgcagcctgcgagtgtcctggtcgcccgcgcgctcctctgtgcgg
cactaccgcatcgagtaccggagcctggtgcccggagatgacagcgacgaagacgaggag
gatgatgaggaccgggagcggccgagcctgcaggaggccgaggtggatgcggcagtgacg
atgctggcgctgagcgacctgcagcctgagacgcgctaccgcgtgcacgtcgtcgccgtg
tacgacgggggcgaggctgtgtcaggggccgttgaggagaccacgctcgatgagcggggc
tccccgagcggcctggaggtggaggagcgcttgtcggacagcgtgctcgtgcgctggctc
ccctcgccgggccgcgtgctctcctaccgcgtgcgctacgcgccgctggagggaggcgcg
ggggcggcggagggcacgggtggggagcgtgcggtgagcggcgagctcgtcggcgcgcgg
ctcgagggcctggcgcccggcacgcgctaccgcgtcacggtgatcgccgagtacgcgacc
gggctcagcgacccactcgtcgccgacgtggagacgctgggcgagacgggcggcgtgacg
gagctgcgagtgctggagaccacatggggcagcctgcgcctcacctggagccctgcgccg
ggcccagtagcccgctataacctgcggtactcggcaccgacggcggagacggagaccgcg
gggggggaggaggccggcagcgggctctgggacgtgggcgcggggcccgggctgggcgag
cagcaggccatcctgcggcccgatgccacgggagcttggatacgaggcttgaggccggaa
acgacgtacgccatctccgtgatggcggaatatgcgtcgggagagggcgagagggcctcc
gtggagggcaccacgctgccagagatggggccggtgtcactcctggaggcctcggacgtg
gcggcagactccgcaacggtgtcgtgggcaccagcgccgggccacgtcgaggcgtacagc
attgagttccgctcggccgccggggacgagcacggcgctcgtgacgcggtggcgcgggcg
acatccggcgcgctcgacggcctcacgcccggcacggcataccaggccgtcgttacgccc
gtgtacgccgacgacgagcggggccctcccgcctccgtcaacttcacgaccgaagattcg
gcagaggcacgcgcgctccgcttctcgcacatcaccccggcgagcgcgcgcgtgctctgg
agcgctgcccgcggcgccgttacgcagtaccgtttatcgttccgtgccgccagcgggccc
ggcaaggcggtggtgctcaaggtgcccggcgatgccacgaccatcccgctgcgtcgcctg
cggcagaacaccaactatgacgtgctggtgtaccccgtgtaccgctccggggagggccag
cccatcaagggccgcttctccaccgtgcctacggtcaagttccgacccccgcgcgacctc
cgcgtgacggatgcatgggcgagcagcctgcgtgcgtcgtggcgcccggcgccagggccc
gtggtggcgtaccgcgtggcctacgctgccgaagacgaggacgcggccttgcctcgtgag
gtgatcgtcgggccgcacgactctacggccgttatcgatgacctccggcctgacacggcg
tacgtgctgagcgtgcacgccatctttgccgatggggagagcctgggcctcgaggggaag
gcctcgactggcgacatggagccggagccaccgactatggagccggagccctcaggcggg
cgctttgcgtgctcggcgccacacgctgacattgtgctgctgctggacggctcgtggagc
atcgggcgccacaacttccgcctcgtgcgccagttcctcgaggcgctcgtgcacgccttc
gacgtgggcgccggccgcacgcgcgtcggcctggtgcagtacagcggggacccacgcacc
gagtggaacctcaactcgtaccccaccaagggggccgtggtgcaggccatcaggggcctg
ccctacaaagggggcaacaccctcaccggcctggcgctctcctacatcctccaaaacagc
ttcacggtgaaggcgggagcacggcccggcatccccaagatcgggatcctggtgacggac
ggcaagtcccaggacggtgtgaaggggcccgcgcgcagcctcaaggacgctggcgtcgag
ctcttcgctatcggcgtgaaggaagcggacgaggcggagctgaaggagatcgcgtcggag
ccggacgagatgcacgtgcataacgtggccgacttcgcagccatgagctccatcgtgggc
agcctcaccaagacggtgtgcgcgcgcgtcagcgagcaggagcgggagatcgtcgctgcg
gcgagcattgccgatgccggcccccaggccccgcgtgacctcgtgacctcggagatcacg
accacgagcttccgcgtgtcctggacacgcgcaccgggccgcgtgctcatgtaccgcgtc
gtcttctaccccaccaagggcggccagcctgacgaggtggtggtggacggctcagccaac
tcggccgtcttgcagaacctcctgacggcctccgagtaccaggtggccgtgttcggcgtc
tacgccagcgcggcaagcgaggccctccgtggctctgagtccaccctggacctgccccct
attcgggacctgcggatctttgacgtaacgcacagcagcatgcgcgtcgcgtgggaggcg
tccccgggtgctacaggttacctgctgctctactcggccaacgcgggcggagaggagggt
gatgccaaggagcaaaaagtgggagcggggttcacggagatcgagctgagccgactgacg
ccgagcacggagtacacggtgacgctgtacgccatgtacggcgaggaggcgagcgacccg
ctcactggccaggagaccacgcttgcacgaggagccgctgcagccacgccaaagatgccc
acaagcaagatgcccacaggcaagccctcctcgttccacctcgttaaggaaagagtcgac
gttagctcatcatcggccggcctggcggctcccagcaacctgcacgtgtccgaggagtcg
tacgaccggttccgtctctcctgggaggtccctggggactcctccgtgctgggattccgc
gtcgtgcaccgtccctctgcgggaggcgaggagaaggtgctgttggtgggagcgggcgtc
agctcggtgttgctgcagggcctgcgcgccggcacggagtacagtgcccacgtgcacgcc
acctacagcacgggcgagagcgtcggactcacggggctcgcacgcacacggcacctgggc
atcaaccacctcttcgtgtacgatgtgagagccacggggttctgcgtcgagtggcaaccc
cagcgcgacgccactgcgtaccgcgtcgtgctgcaggaagctctaggcggtccccagcag
gacgtgacgctgtcctccagcgtgaacgcgcactgctactacgagctgctgcctggcacc
gagtaccgcgtcggcgtccacgcgcaggtgcgggaggcggagggcccagccgtcaacgtc
acgcagcggacacgctccgtggtgaccgaggctccctacacgacgcccatcggggctcct
cccaccaccgccccgcagcctcgcgaagagtgccgctcggcccgcgccgacctcgtcttc
ctggtggacggctcgtggagcatcggggacgacaactttcacaaggtcatgaggttcctg
ggcagcctggcgggcgcgctggagaacatcggcccgcacggcacgcaggtggccatggcc
cagttcagcgacgacgcgcgcaccgagtttaacctcaacgttcaccgcagccgggagtct
ctgctcgacgggatccgcaacgtccgctacaaggggggcaacactaagacaggccgggcc
atgaagcacgcacgcacggagatgttcgtgtcggagtctgggatgcgccgcggcgttccc
aagctgctcgtcgtcatcacggatgggcgctcgcaggacgaggtgacgcgcattgccaag
gacgtacagcacgagggctacagcgtcttctctatcggcatcgcggacgccgacgtggca
gagctgacgaacatcgcgagccggcccagtgagcggcaccgcttcttcgtcgacagcttc
gacgatttcaggaaaatcgagaacgagctcatcggcttcatgtgtgaagcggcctctgca
acctgccctccagtctacctcaacggatactccgtggcaggcttcaagatgatggaggca
tttgggctggtggacaagctgtactcgtccctgagcggcgtgtccatggagcccggctcc
ttcaatgccttcccggcattccgcctgcacaaggacgccatgctctctcaggccaccagg
gagctgcaccccgaggggctgccgcaggagtacacggtctcgttcatgctgcgcatcctg
cccgacacgtcgacggagccgtttagcgtgtggcaggtgctcgacaaggacagctcctcg
caggccggcgtgcagctcgacgtcggcggtcgcaccctcacctacttcacggtggatgag
gaggggaagccccagttcatctcgttcgacggccccgacgtgcagaggatcttctttggc
tccttccacaaggtgcacgtgacggtggccaagcaaagtgtgcgcctcttcgtcgactgc
acgctcatcgcggagaagcagagccgcgtgccggggaacgtgtcgcttgatggcagtgaa
gtgctaggccggcttgcgcgctccacacccagcgcgccaaagtccgccacgttccagctg
cagatgttcgagatcgtgtgcggcaccacctggcccgccaaggacaagtgctgcgagctg
ccggcgctgagagacgaggcgacgtgccccacgttgccgctcgcctgctcctgcgcccag
gacagcaaggggccccccggacctccagggccccccggagggactggccccaagggtccg
agaggagagaacggcggcatcgggccccagggggcaatgggtccacggggggagcaagga
ccccctggctctcagggacagcctggacctcaaggccccaatggaatatcaatggaggga
gagccgggccgaccgggtgagaagggagaccagggcccggccggacatgcagggcccatg
ggtccctctggccctcccgggcagcagggcagggagggcttgcagggcccgcggggccct
ccggggaaggaaggtggacctggattgccaggtcaagcggggcccatgggcacgtcagga
aaccctggacccccggggccgagcggcaaacctggcttcaacggcgagggtggacttcag
ggcccagcaggaacgaaaggagaaaagggagagaggggcgatgctcagggacagaatgtg
gtgcggatgctcgcgcggcaggtctgcgagcagatgatcaacagccacatcagccgattc
aacagcatcataaaccagatccccagcaacaaccaccaccatgtccgggccctgccgggg
cccaaaggggaggcgggacgcccagggccccccgggccgcctggggagccggggcctctg
ggtcgcccgggtttcccagggtcccccggtatgcctggtcgcggcggggagagaggcctc
gctggagagaagggcgagcggggatccacgggcattggaagttcaggactgcccggccct
caaggttctccaggctcccctggagagggtcggcagggttctccgggccctgagggaatg
cgagggcccccggggcctccaggctccttcggttcgcctgggctacggggctcgccgggc
cccaacggctactgcgacgcgtcgatgtgcggcggctacaacatcggaggtgaccacaac
tccgagggaggaggaagaggaggccgccagcagcccgcggcgccgccgccgagacggggc
gactcgcccggcgaggagggcggagacgagggcggcgaggaggacgcggaggaggaggag
gggcgctacggggactacgcggggccctacggccaccacgagggcgcctacggggacgcg
gcggacggagcagcggggctggatgaggaggagcaggtgccgtctcccgggatgactcgg
tggatggctcgtttccgccgctcgccacgatag
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integrated database retrieval system
