Lethenteron reissneri (Far Eastern brook lamprey): 133344106
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Entry
133344106 CDS
T09663
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133344106 (CDKAL1)
Enzymes [BR:
lrj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
133344106 (CDKAL1)
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
133344106 (CDKAL1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
133344106
NCBI-ProteinID:
XP_061410063
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All DBs
Position
19:complement(854741..866446)
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AA seq
594 aa
AA seq
DB search
MPEPCEAELEDIEDILGEGDEVGGRPPRPHLVPRARRRGAHATQREEVLADSVIPGTHSV
YVRTWGCSHNSSDAEYMAGQLAAYGYRITDDPSEADLWLLNSCTVKGPAEDHFRNAVQKA
LADGHKVVVSGCVPQAQPRLGYIKGLSVVGVQQIDRVVEVVEETLKGHTVRLFGQKKENG
KRLGGAPLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEQLVERAQQSF
QEGVRELWLTSEDTGAYGRDLGTDLPTLLWRLVDTVPEGAMMRLGMTNPPYILEHLEEMA
RVLSHPRVYAFLHVPVQSGSDAVLSAMRREYSADDFRHVVRFLRERVPGITVATDIICGF
PGETEEDFAETVRLVEEFRFPSLFINQFYPRPGTPAARMPPVPAYEKKQRTKELSQLFRS
YNTYGHKVGERQLVLVTEESFDGQFYVAHNKCYDQVLVPRDPALMGRMVEVDIVEAGKHF
LKGRPVEPTTTTTTTTPPPPLARPLPRGAVSGLLLQREPASCQAGGCCGGGERAGGGCPG
PPTAGASLRARVAPAVRAAGLALALAVGAAAALVEIARAASWALAPSPHGDSVG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccggagccgtgcgaggctgagctggaggacattgaggacatcctgggggagggcgac
gaggtgggggggcgccccccacggccccacctcgtcccccgcgcccgccgccggggggct
cacgcgacccagcgggaggaagtgctcgctgacagcgtgatccccggcacgcactccgtg
tacgtgcgcacgtggggctgctcgcacaacagctccgacgcggagtacatggcggggcag
ctcgccgcctacggctaccgcatcacagacgacccgagtgaggccgacctctggctgctc
aacagctgcacagtgaagggcccagccgaggaccacttccgcaacgccgtgcagaaggcc
ttggctgatggccacaaggtggtggtgtcaggctgcgtcccacaggcccagcctcgccta
ggctacataaaaggcctcagcgttgttggggtgcagcagatcgaccgcgtcgtggaggtg
gttgaggagaccctgaaaggtcacacggtgcgtctgttcgggcagaagaaggagaatggg
aagcgtttagggggcgcccccctggacctccccaagatccgcaagaacccgctcatagag
atcatctccatcaacacggggtgcctcaacgcgtgcacctactgcaagacgaagcacgcc
cgcggagagctcgccagctaccccgtggagcagctggtggagagggcacagcagtccttc
caagagggcgtgcgcgagctgtggctcacgagcgaggacacgggcgcctatgggcgcgac
ctgggcaccgacctgccgacgctgctgtggcgcctcgtggacacggtgccggagggggcc
atgatgcggctgggcatgaccaacccaccctacatcctcgagcacctggaggagatggcg
cgcgtgctgagccacccgcgcgtctacgccttcctgcacgtgccggtgcagtcaggctcc
gacgccgtgctgtccgccatgcggcgcgagtacagcgccgacgacttccgccacgtcgtg
cgcttcctgcgggagagggtccctggcatcaccgtcgccacggacatcatctgcggcttc
cccggcgagacggaggaggactttgcggagaccgtgcggctggtggaggagttccgcttc
cccagcctcttcatcaaccagttctacccacggcctggcacgcccgcggcgcgcatgcca
cccgtgcccgcctacgagaaaaagcagagaacaaaggagctgtcccagctgttccgttcc
tacaacacgtatgggcacaaggtcggggagcggcagctggtgctggtgacggaggagtcg
tttgacgggcagttctacgtggcacacaacaagtgttacgatcaggtgctcgttccccgt
gaccccgcgctcatgggccgcatggtggaggtggacatcgtggaggccgggaagcacttc
ctgaaggggcgccccgttgagccgaccaccaccaccaccaccaccacgccgccgccgccc
ctcgctcgcccgctcccccgtggcgctgtgtcgggcctcctgctccagcgggaaccggcg
tcgtgccaggctggcggctgctgcgggggcggtgaacgtgccgggggggggtgcccgggg
ccccccaccgcgggggcctccctacgggcccgcgtggcccccgcggtgcgtgcggcgggg
ctggcgctggccctggccgtgggggcggcggcggcgctggtggagatcgctcgcgcggcc
tcctgggcgctcgcaccctccccgcacggggactccgtggggtga
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