Lethenteron reissneri (Far Eastern brook lamprey): 133344219
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Entry
133344219 CDS
T09663
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133344219
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133344219
09142 Cell motility
04820 Cytoskeleton in muscle cells
133344219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
JAG1-like_EGF2
Med29
Epimerase_2
DUF724
Motif
Other DBs
NCBI-GeneID:
133344219
NCBI-ProteinID:
XP_061410254
LinkDB
All DBs
Position
19:7254940..7399921
Genome browser
AA seq
3149 aa
AA seq
DB search
MAMMVLRLLLLLLLWATLVAFSANAQAQQKGLFPAILNLASNAKIHANATCGENSAEIFC
KLVEHVPGRPNRNSQCRVCNLNSHIPDERHPITNANDGTNGWWQSPSIQNGRKFHWVTIT
LDLQQVFQVAYVIVKAANSPRPGNWILERSLDGATYRPWQYYSVSDSECLTRYGITPTVG
NPVYRRDDEVICTSYYSRLVPLENGEIHTSLINGRPSSDDPSPKLLDFTSARYIRLRLQR
IRTLNADLMTLSHRDPREVDPIVTRRYYYSIKDISVGGMCICSGHASTCPWNEDTQKMEC
QCEHNTCGENCQRCCPGYNQRRWRPGTINNGNTCEKCNCHGKAEDCYYDAEVDRANRSLS
IHGRFSGGGVCINCSANTAGTNCETCRDGFYRPTGVLPDDPYPCRLCQCDPQGSLSQVCI
KDEKHADPERDLSPGQCLCRPGFAGKRCERCAFAYRGYPNCEPCLCSMAGSTNDDPCSEP
CVCKEHVEGEHCDRCRAGFYDLRPRNPRGCSACFCFGLSSSCQSLPWGITRVVDMRGWRV
TDRQGLRKVKTFLEVDQVAVRNADVRRTLPALYYWLAPASYLGNKLTAYAGHLRYSVSYD
IPVDSTDSEMISDVDVIIEGNGQALSSGSLGLMLQPFEEQTLSLRLLPENFFDFRSNAPA
SRDALMTVLANVTRLQIRASYSSVKQAVYRLSAVSLDVASPDAAVGSPAALDVEQCHCPH
GYAGTSCESCMRGHRRVDGTLHGGRCEPCRCHGHADDCDDLSGDCMLPLSGCRHNTMGPH
CEHCRPGFYGNATRGTADDCLPCTCPLSIASNNFSPTCHQDPRGVLTCDQCSPGYIGLRC
ERCADDFFGEPGSPGGSCRRCECNGNEEARGGGRVCDALTGQCLRCRERTAGFHCEHCAH
GFYGDATGTGGCQPCQCHPEGATSPQCDRINGQCPCRPNVVGRTCEQCAIGFYGLSSGAG
CSPCPCHPVGTAGVACSADGRCHCWPGVEGRSCDRCTSGHYGFKEGGCTPCNCSHTNHHC
DQETGRCLCPPNTEGTRCHRCIDDHWGLNPHAGCRACNCSAAHSHGARCDEASGQCSCLE
GYGGRTCGECAQGRWGYPACRPCECHPEGTRDNTCPVPPTGSRCGCDERTGQCACKENVG
GTRCDACLPGTFGLNREDPRGCTACFCFGVSSVCRELQGFVRMQVFMVEGQRSMPVVNQV
GQRETVSGVRYQHPEMILHAGEVLRTLHHEPFYWKLPSQFTGPKLTAYGGKLRYTVYFEA
EDGSGRSDREPQVLLRGGRNKELLIYRDMAPPRPGQRTQHQMDMTEHEWRYFNSVLDQPV
SRADFMSILGGIGDIFIKASYGSRMTESRISEVSLEVAARGNGSSHLQPACQVEQCECPA
GYSGLSCQECARGFFRDVSARHAPGQPRLALGPCIPCHCNNHSASCDPESGRCQGCRHNT
TGHHCDHCAPGYYGRVKGRHDDCTACACPKSNPNNFSPTCTQVGVDDFRCDACRTGYTGQ
YCERCSPGYYGNPSLPGEPCRSCGCHGDGSLGGECHHATGQCACLPGVMGRACDQCQPRH
VLVNRNCLSCNDDCTGLLLNDLDVLAVSVMHVNLTGLIPAPYSRLEEFANMTRTLGDQLK
SQKPPSQMTDAATRGVADVIGEIDAFDSRATRVLEEARATEQQLRETQERAGALLASVRS
ALNAALELVGNASRLRELAVGGEDGGGGTVPRALADMERLVAEIRAVSLSRQRDVANKEL
GKSRELLDKVKQAFEQPRQANEGLAQDVSDLLWEVFNRLSDLQRILNEAKEATAMANELN
QSNNKSLVELKDKSATLETNLNSTKEMISQGEKILGNVKQAIHEIDKLLKQAELDQERLD
TAAPKLRDRVDATVMALREKGLIELVFRAENHSAAMQALAAQLSRILDETKNQTFDATAA
LNAYGAIVQAVADAEETAQQADTVASEALAQAVGPSGSLEQAGRASLQLSSELLRETKEL
NDKATGFSDRLAAIKMQVTNGEDKTKALARQLASALASLASLPNDTSRAMEEVMEAAKGV
SEVASGVLEETMDLNKKIMNVSEHLDKAAENERSANAFIDDSAKNIAEASDKLRDVEQRA
ARLSKRMEPFGALQDNLGRNISVIKELINQARKQAASIKVSVQSSTGDCVRTYRPEIPHG
KLTYNSMVLHVKTSEPDNLLFYLGGSQNPDYMAVEMRRGRVSLVWDVGSGPGRVEYTDLA
INDGNWYRIEATRSLRVGALSIRAFKGDRGGVSQLPSSGTSPEGNSAFDVDETTLLFIGG
LTGGVKKADSVKATSFKGCMGEAFLDGRSVGLWNFREMEGTCGGCEISPQAAETEVSTQF
DGEGFVPVDRPIRWNSEVSIITFKFRTFSPNALLMYLATADKKDFLSIELVNGQVRVWYD
LGSGPGNVTSDNKHNDGNWRSLKFSRSKQMGTLIVEDEARNVVNKKSRSQGASGGLNLSS
MDLIYFGGLPEGVLPRGEVKSRTFTGCIKGVEISRSYFNLLTFKNSIGVKKGCSLEHVHM
VSIESPGFVELPATTASLPPSSEISFSFSSTNASGLLLHAAGEQSPRVVRKRRQSGVPYY
AVYLLDGNLEVLFSTGDATRKIVKKSTGGSYSDGREHAVVVSRRQRVVRMSVDDSPSRDA
NLGSDGEITVARLFVGGTSAGYSPPSSVPVHTYTGCVQNIIVNGVLQDFAHSLNFDNVDI
GRCRTSEPQWRATMQPTGRKAGGGSGRAVVVPALNRPQPGRGLPTPPPHAAPNKPASTTA
QMPVRCAVEAAASLEANSLQFGLKKDSHAVLTFDRDTVKRRLALQLSVRTLASDGLVLYM
GSANNLAALQLIGGRPQFTFDLGKGVIKVTAAQLINDGTWHTLRVERGKRKVDLSVDTRQ
RATTKLPSVSSSLDVEKRLYLGGAPAGAPGIKRLGNVTHSLAGCIRDFSLNGAKHSLSPA
TFSLNHVEGCYQNVEPGFYFQGTGYAMLAAGGYRVGTDLEISLEFRTTQLDGVLLAISSP
RMDAVGIELVAGKVLFHADNGAGRFSAELSPLASAEAGSGGTGAGHLCDGHWHRLEASKL
KNRLVLKVDGAATEAASPHQSNSADTNDPVYVGGFREGVKQHALTTQVPFRGCIRNLRFM
KSHQIQPQIHLGEASDMMGVLPHSCPAQS
NT seq
9450 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggtgctgcggctgttgctgctgctgctgctgtgggcaacacttgttgcg
ttttcggcgaacgctcaagcacagcagaaaggcctcttcccagccatcctgaacttggcc
tccaacgccaagatccatgccaatgccacgtgtggtgagaacagcgccgagatcttttgc
aagctggtggagcacgtgccaggccggcccaaccgcaactcccagtgccgcgtctgcaac
ttaaacagccacatccctgacgagcgccaccccattacaaacgctaatgacggcaccaac
ggctggtggcagagcccgagcatacagaacggcaggaagtttcactgggtcaccatcacg
ctcgacctacagcaggtgttccaggtggcgtacgtgatcgtgaaggcggccaactcccca
cggcccgggaactggatcctggagcgctctctggacggcgccacttaccgtccatggcag
tactactccgtgagcgacagcgagtgcctgacccgctacggcatcacgcccaccgtcggc
aaccccgtgtaccggcgggacgacgaggtcatctgcacgtcctactactccaggctggtg
ccccttgagaatggcgagatccacacgtcgctgattaacgggcggccgagctcggacgac
ccctcgccgaagctgctggacttcacgtccgcgcgctacatccgcctgcggctccagcgg
atccgcacgctcaacgccgacctcatgaccctgagccaccgcgacccacgggaggtcgac
cccattgtgacgcgacggtactactattccataaaggacatctccgttggggggatgtgc
atctgctctgggcacgccagcacctgtccttggaacgaggacacacagaaaatggagtgt
cagtgcgagcacaacacgtgtggggagaactgccagcgctgctgccccggctacaaccag
cggcgctggaggcccggcaccatcaacaatggcaacacctgcgaaaagtgcaactgccac
ggcaaggctgaagactgctactacgacgcagaggttgaccgcgccaaccgaagcctcagc
atccacggccgcttctccggcggcggcgtctgcatcaactgcagcgccaacacggccggc
accaactgcgagacttgccgcgacggcttctaccggcccacgggggtgttgccagacgac
ccatacccctgccgcttgtgccagtgtgatccgcaagggtctctcagccaagtgtgcatt
aaagatgaaaagcatgccgatcccgagagagacctgtcacctgggcagtgtctctgcagg
cctggctttgccggcaagcgctgtgagcggtgtgcctttgcctatcgcggataccccaac
tgcgagccctgcctctgcagcatggcaggaagcacgaatgatgacccctgcagcgagccc
tgtgtgtgcaaggagcatgtggagggtgagcactgcgaccgctgcagggccggcttctac
gacctgcggccaagaaacccgcgcggctgctccgcgtgcttctgcttcggcctctccagc
tcgtgccagagcctgccatggggcatcactcgggtggtggacatgcgcggctggcgcgtc
acagaccggcagggactgcgcaaggtgaaaaccttcctggaggtggaccaggtcgccgtc
aggaacgcggacgtgcgccgcacactgccggcattgtactactggctggcccccgcttcc
tacctgggcaacaagctgacagcgtacgctggccacctgcgctacagcgtgtcctacgac
atcccggtggacagcacggactcggaaatgatctcggacgtggacgtcatcatcgagggc
aatggccaagccctcagctcgggttcgctgggtttgatgctgcagccattcgaagagcag
accctgtccctccgcctgctgccagagaacttttttgatttccgctccaatgctcccgcg
tcacgcgacgccctcatgacggtgctggccaacgtgactcgcctacaaatccgtgccagc
tacagctcggttaagcaggctgtgtaccggctgagcgccgtgtctctggacgtggcctcg
ccggatgcggcggtggggagtcccgcggcactcgacgttgagcagtgccattgcccccac
ggctatgctgggacatcctgcgagtcgtgcatgcggggacaccggcgcgtggacgggacc
ctgcacggtgggcggtgcgagccctgccgttgccacggacacgccgacgactgcgatgac
ctcagcggcgactgcatgctgcctctgagcggctgccgccacaacaccatggggccgcac
tgcgagcactgtcgcccgggcttctacggcaacgccacgcgcggcacggcagacgactgc
ctcccgtgcacgtgccccctgtccatcgcctccaataatttcagcccgacctgccaccag
gatccacgcggggtgctgacctgtgaccagtgttcaccaggatacattggcctccgctgt
gagaggtgcgcggacgatttcttcggcgagccgggctccccgggcggctcgtgccgccgc
tgcgagtgcaacggcaacgaggaggcgcggggaggtggccgcgtgtgcgacgcgctcacc
ggccagtgcctccgctgccgcgagcgcaccgccggcttccactgcgagcactgcgcccac
ggattctacggggacgccaccggcacgggcggctgccagccttgccagtgtcaccccgaa
ggagccacctcccctcagtgcgaccgcatcaacgggcagtgtccgtgccgccccaacgtg
gtcggccgaacgtgcgagcagtgcgcgatcggtttctacggcctgagctctggtgccggt
tgctccccgtgcccctgccacccggtgggcacggcaggcgtcgcctgctctgccgacggg
aggtgccactgttggccgggcgtggaggggaggtcctgcgaccgctgcacctctggccac
tatggattcaaggagggcggctgcacaccgtgcaactgttcgcacaccaaccaccattgc
gaccaggagacgggacgctgcctgtgccccccaaacactgagggcacgcggtgccaccgc
tgcatcgacgaccactggggtctgaacccgcacgccgggtgtcgcgcgtgcaactgtagc
gcagcgcattcccacggggcacggtgcgacgaagcgagcgggcagtgctcctgcctcgag
gggtacgggggccgcacgtgcggggagtgcgcgcagggccgctgggggtacccagcgtgc
cggccctgcgagtgccacccggagggcacgcgcgacaacacgtgccccgtgccgccgacc
ggctcgcggtgcggctgcgacgagcgcactggccagtgcgcttgcaaggagaacgtcggt
gggacgaggtgcgacgcgtgcctgcctggcacgtttgggctgaaccgggaggacccgcgc
ggctgcacagcctgcttctgtttcggcgtctccagcgtatgccgtgagctccagggcttt
gtcagaatgcaggtcttcatggtggagggacagcggtccatgccggtcgtcaaccaggtt
gggcagagagagaccgtgtctggcgtgcgctaccaacacccagagatgatcctgcatgcc
ggggaggtgctgaggacgctgcaccacgagccattctattggaaactgccctcgcaattc
actgggcccaagctcacggcttacgggggcaagctgcgctacacggtgtacttcgaggcc
gaagatgggagcggccgttcagaccgagagccacaggtgctgctccgtggcgggcgcaac
aaggagcttctgatctatcgcgacatggcgccaccgcgccctggacaacgtacgcagcac
cagatggacatgacggagcacgagtggcgttacttcaactccgtcctcgatcagcccgtg
agccgcgccgacttcatgtccatcctcggcggcattggggacatcttcatcaaggcctcc
tatggcagccgcatgaccgaaagcagaatctcggaggtgtcgctagaagtggcggccagg
gggaatgggtcgagccacctgcagccagcgtgtcaggtggagcagtgcgagtgccctgcc
ggctacagcggcctctcctgtcaggaatgtgcacgagggttcttccgagatgtttcagcc
agacacgctcctggacagccgagactcgcactcggcccttgcattccatgccactgcaac
aaccacagtgcatcatgcgaccccgagtctggacggtgtcagggttgtcggcacaacacg
acgggacatcactgcgaccactgtgccccagggtattatgggagggtcaaaggtcgccac
gacgactgcaccgcatgcgcctgcccgaaaagtaacccaaacaacttcagcccgacgtgc
acccaggttggagtggacgacttccgctgtgacgcctgccgcaccggctacactgggcag
tactgcgagcggtgctctcccggttactacggcaacccgtcgttgcctggcgagccctgc
cggtcctgcggttgccacggcgacgggtccctgggtggcgagtgccatcacgcgacgggg
cagtgcgcgtgcctgccgggggtgatgggccgtgcgtgcgaccagtgccagcccagacac
gtgctcgtcaacaggaactgcctgtcctgtaatgacgactgcacgggcttgcttctcaac
gacctggatgtgcttgctgtgagcgtgatgcatgtcaacctcaccggcctcatccctgct
ccgtactcacgactcgaagagttcgcgaacatgacccgaacgcttggggatcagcttaaa
tcacagaagccaccgtcccagatgacagatgctgctactcggggagtggctgatgttatc
ggagaaatcgatgcctttgatagccgggccacacgggtgctggaggaggcgcgtgcgacc
gagcagcagctgcgtgagacgcaggagcgcgctggggcgctgctggcgagcgtacgcagc
gccttgaacgccgctctggagctggtggggaacgcgagccgtctgcgcgagctggcggtg
ggcggcgaggatggcggcggcggcacggtgccgcgggcgctcgccgacatggagcggctc
gtcgctgagatccgcgccgtcagcctgtcccggcagcgcgacgtagccaacaaggagctc
gggaaatccagagagctgctagacaaggtgaagcaggcctttgagcagcctcgccaggca
aacgagggcttggcccaggacgtgtcggacctgctgtgggaagtcttcaaccgcctgtcg
gacctgcagaggatcctgaacgaggccaaggaagccaccgccatggccaatgagctcaac
cagagcaacaacaaaagcctggtcgagctaaaggacaaaagtgcaacgcttgaaacaaat
ttgaattcgaccaaggagatgatttcccagggggagaagatcctcggcaatgtcaagcaa
gcaattcatgaaattgataagctgcttaagcaagcggagctcgaccaggagcgtctggac
acagcggcgcccaaactgcgggaccgcgtggacgcgacggtgatggcgctgcgcgagaag
gggctcatcgagctcgtgttccgcgccgagaatcactcggccgccatgcaggcactggcc
gcacagctttcccgcattcttgatgagacaaagaaccagacgtttgatgcgacggctgct
ctgaatgcgtacggggcgatcgttcaggcggtggcggacgcggaggaaactgctcaacag
gccgacactgtggccagcgaggcgcttgctcaggccgtgggtccctctggctccctggag
caggctgggagggcgtccctgcagctgagcagtgagctgctccgagagacgaaggagctc
aatgacaaggccaccggcttttctgaccgcctggcggccattaaaatgcaggtgacaaac
ggcgaggacaagaccaaggctctggcgcggcagctggcctcagccctggcatctctggcc
tcgctgcctaatgacacaagccgcgccatggaggaggtgatggaggctgccaagggcgtg
agcgaggtggcttcgggggttctggaggagacaatggacctcaacaagaagatcatgaac
gtgtcggaacaccttgacaaggcggcggagaacgagcgctcggccaacgctttcatcgac
gactcggcgaagaacattgccgaggcgagcgacaagctgcgggacgtggagcagcgggcg
gcgcgcctctccaagcgcatggagcccttcggagcgctgcaggacaacctcgggcggaac
atctccgtcatcaaggagctcatcaaccaggcccgcaagcaggcggcctctatcaaggtc
tccgtgcagtccagcacgggcgactgcgtgcggacgtaccgccctgagatcccacacggg
aagctcacgtacaactccatggtgctacacgtgaagacctcggagccagacaacctgctc
ttctacctgggaggctcccagaacccggactacatggcggtggagatgcggcgaggccgg
gtgagcctcgtgtgggacgttggctcggggcccggacgagtcgagtacacggacctggcc
atcaacgacggcaactggtatcgcatcgaggcgaccaggtccctgagggtcggcgctctc
tccattcgggccttcaagggcgaccgaggcggagtgagccagctgcccagcagcgggacg
tcacccgagggaaattcggccttcgacgtggacgagaccactctgctcttcatcggaggc
ctcactggaggggtcaagaaggccgattcggtgaaggccacctcattcaagggctgcatg
ggagaggcattcctggatggccgctcggtcggcttgtggaacttccgtgagatggaagga
acttgtggtggctgtgagatcagtccccaggcagccgaaacagaggtctccacacagttt
gacggcgagggcttcgtgccggtggaccggccaatccgctggaactccgaagtctccatc
atcaccttcaagttccgcaccttctcccccaacgctctgctcatgtacttggccaccgct
gacaagaaggacttcttgtccatcgagctggtgaacgggcaggtgcgcgtgtggtacgac
ctgggcagtggaccagggaacgtgaccagcgacaacaagcacaacgacggcaactggagg
agcctcaagttctcgcgcagcaaacagatgggcacgctgatcgttgaggacgaagctcgc
aacgtggtgaacaagaagagcaggtcgcagggcgcttcgggaggtctcaatctctcctcc
atggatctcatttactttggcgggctccccgaaggggttctacccaggggcgaggtgaag
agccgaacgttcaccggatgcataaagggtgtggagatctcacgcagctacttcaacctg
ctcacctttaagaactccattggggttaaaaagggctgctcactcgagcacgttcacatg
gtgagcatagagtcgcccgggttcgtggagctgccggcaaccaccgcgtctcttccgccc
tcatccgagatctccttctccttctcctcgactaacgcttcgggtcttctgcttcacgca
gccggggagcagtcgccgagagtcgtccgcaagcggaggcagagcggcgtgccttactac
gccgtgtacctcctcgacgggaacctggaggtgctgttcagcaccggcgatgccacgcgc
aagatcgtcaagaagtcaacgggcggttcctacagcgatggcagggagcacgcggtggtt
gtcagcaggcggcagcgggtggtgcgcatgtcggtggacgacagcccgtcccgggacgca
aatctgggcagcgacggagagatcacggtggccaggttgttcgtgggagggacgtcggcc
ggatacagccctcccagcagtgtcccagtgcacacatacacgggctgtgtgcagaacatc
atcgtcaatggagtgctgcaagactttgcccactctctaaacttcgacaacgtggacatc
gggcggtgtcggacatcggagccgcagtggagggcgacgatgcagcccacggggaggaag
gccggggggggctccgggcgggcggtagtggtccctgcgctgaacaggccccagcccggc
agaggcttacccactcctcctcctcatgctgctccaaacaagcccgccagcaccacagct
caaatgccggtgcggtgcgctgtcgaagctgcggcttctctcgaagccaacagtctgcaa
ttcggcctgaagaaggacagccatgccgttctgaccttcgacagggacacggtgaaacgc
aggctcgcgctgcagctgagcgtgcggacactggcgagcgatgggctggtgctctacatg
gggagtgcgaacaacctcgcagcgttgcagctgattggtggacgcccgcagttcaccttt
gacttgggcaaaggggtcattaaggtcacggcggcacaactaatcaacgacggaacttgg
catacgttgagggtcgagcgcggaaagcgcaaggtggatctgagtgtggacacccggcag
cgcgccaccaccaagctgcccagcgttagctccagcctggatgtggagaagaggctttac
ctgggcggggcccctgctggcgcacccggcatcaagcgactgggcaacgtcacacacagc
ttggctggatgcatcagagacttctcactcaacggtgccaagcacagcctcagtccagct
acgttttcgctgaaccatgtggagggctgctatcaaaacgtggagcctgggttttacttt
cagggaacgggatatgccatgctagcggcgggagggtaccgcgtgggcacggacctggag
atttcgctggagttccggacgacccagctggatggggtgctcctggccatcagtagccca
cgcatggatgccgtcggcatcgagctggtcgctggaaaggtgctattccacgcagacaac
ggagctggccgcttctcagccgagctctccccgctggcatcagcggaggcagggtccggt
ggcaccggtgccggccacttgtgcgatggccactggcaccgtttggaggccagcaagctc
aagaaccgcctggtgctgaaggttgatggagccgcaacagaggccgccagtccacaccaa
tccaactcggccgacacgaatgaccccgtctacgttggcggcttccgagagggagtgaag
cagcatgcacttaccacccaagtgcctttccggggctgcattcgcaatcttcgcttcatg
aagagccaccaaatccagccgcaaattcacctgggagaagcctcggacatgatgggcgtt
ctgcctcattcctgtccggctcaaagctag
DBGET
integrated database retrieval system
